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The map label for this gene is flgF [H]

Identifier: 158422269

GI number: 158422269

Start: 715982

End: 716704

Strand: Direct

Name: flgF [H]

Synonym: AZC_0645

Alternate gene names: 158422269

Gene position: 715982-716704 (Clockwise)

Preceding gene: 158422245

Following gene: 158422270

Centisome position: 13.33

GC content: 63.21

Gene sequence:

>723_bases
ATGTCCAACGGCCTTTACGTCGCCCTGTCCGGTCAGATGGCGACGGAAAAGCGGATGGCCACGATTGCGAACAACGTGGC
GAACATGAACACGCCCGGTTATCGGGCCGAAGAAATCAAGTTCTCCAGCATCATGGCCGAGCAGGGGGCGAAGGACATCA
AGTTCGCCTCCACGGGCGAGAGCTACACGTCCCGGCGCGCCGGCCCCATCACCTATACCAACAGCCCCTATGACGTGGCC
GTTCAGGGCAAGGGCTGGTTCTCGGTGAAGACGCCGGACGGCGTCGCCTACACCCGCGACGGGCGTTTCAACGTCACCGC
CGACGGCATGCTGGTCAGCGTGAACAATTATCCGGTGCTCGATCAGGGCGGCACGGCCGTCATGATCCAGCCCAACCAGG
GCGAGCTGAAGATCACCGCTGACGGCACCATCATCCAGGGCACCAACCCGGTGGGAACGCTCGGCCTGTTCGAGATTCCG
CTCGATGCCAAGCTCAAGCGCTACGACAACTCGGCGGTCATCCCCGACAAGGCGGCGACGCCGGTGACGGACTACAATTC
CAACGCCATCCGCCAGGGGTATGTGGAAGGCTCGAATGTCGATCCGGTGATGGAGATGACGCGCCTCATCATGGTGCAGC
GCGCCTTCGAGAGCGCCGCGCAGGCCATTTCCCAGCAGGAGACCTCGGGCACCGATTCCATTCGCGCGCTCGGCCCGCAG
TAA

Upstream 100 bases:

>100_bases
TTAAGTGCCCTCCCGTGCGCGTGCCGAATGCGGCGTCACCGGAGGGGTTCCTGTTCAAGCGTCGGACCGGCTCCCGGTCC
CATGGTCCCTCGGAGGCAGC

Downstream 100 bases:

>100_bases
TCCCCTCGCGTGTTCCGGCCGGGCGGCCCATGCCCGGCCTCTTCCCCCTTGAGGTGGCGTGATGAATGCCCTGGTCCGTC
TTCAGGCTGCCGTTGAATCC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMAEQGAKDIKFASTGESYTSRRAGPITYTNSPYDVA
VQGKGWFSVKTPDGVAYTRDGRFNVTADGMLVSVNNYPVLDQGGTAVMIQPNQGELKITADGTIIQGTNPVGTLGLFEIP
LDAKLKRYDNSAVIPDKAATPVTDYNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQETSGTDSIRALGPQ

Sequences:

>Translated_240_residues
MSNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMAEQGAKDIKFASTGESYTSRRAGPITYTNSPYDVA
VQGKGWFSVKTPDGVAYTRDGRFNVTADGMLVSVNNYPVLDQGGTAVMIQPNQGELKITADGTIIQGTNPVGTLGLFEIP
LDAKLKRYDNSAVIPDKAATPVTDYNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQETSGTDSIRALGPQ
>Mature_239_residues
SNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMAEQGAKDIKFASTGESYTSRRAGPITYTNSPYDVAV
QGKGWFSVKTPDGVAYTRDGRFNVTADGMLVSVNNYPVLDQGGTAVMIQPNQGELKITADGTIIQGTNPVGTLGLFEIPL
DAKLKRYDNSAVIPDKAATPVTDYNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQETSGTDSIRALGPQ

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=254, Percent_Identity=31.1023622047244, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787317, Length=242, Percent_Identity=31.8181818181818, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25751; Mature: 25620

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMAEQGAKDIKFASTGE
CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHCCCCCEEEECCCC
SYTSRRAGPITYTNSPYDVAVQGKGWFSVKTPDGVAYTRDGRFNVTADGMLVSVNNYPVL
HHHHCCCCCEEECCCCEEEEEECCCEEEEECCCCEEEEECCEEEEEECCEEEEECCCEEE
DQGGTAVMIQPNQGELKITADGTIIQGTNPVGTLGLFEIPLDAKLKRYDNSAVIPDKAAT
ECCCCEEEEECCCCCEEEEECCEEEECCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCC
PVTDYNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQETSGTDSIRALGPQ
CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC
>Mature Secondary Structure 
SNGLYVALSGQMATEKRMATIANNVANMNTPGYRAEEIKFSSIMAEQGAKDIKFASTGE
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHCCCCCEEEECCCC
SYTSRRAGPITYTNSPYDVAVQGKGWFSVKTPDGVAYTRDGRFNVTADGMLVSVNNYPVL
HHHHCCCCCEEECCCCEEEEEECCCEEEEECCCCEEEEECCEEEEEECCEEEEECCCEEE
DQGGTAVMIQPNQGELKITADGTIIQGTNPVGTLGLFEIPLDAKLKRYDNSAVIPDKAAT
ECCCCEEEEECCCCCEEEEECCEEEECCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCC
PVTDYNSNAIRQGYVEGSNVDPVMEMTRLIMVQRAFESAAQAISQQETSGTDSIRALGPQ
CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]