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The map label for this gene is flgC [H]

Identifier: 158422260

GI number: 158422260

Start: 709544

End: 709966

Strand: Reverse

Name: flgC [H]

Synonym: AZC_0636

Alternate gene names: 158422260

Gene position: 709966-709544 (Counterclockwise)

Preceding gene: 158422261

Following gene: 158422259

Centisome position: 13.22

GC content: 63.83

Gene sequence:

>423_bases
ATGATCGATCCCTTGAAGGTGGCCGGCCAGATCGCCGGCAGCGGCCTCCAGGTTCAGGCGCAGCGCATGCGGGTGGTTTC
GGAAAACCTCGCCAACATGCGCTCCACCGGTTCGACGCCCGGCGCCGACCCCTATACGCGCAAGACAATCCAGTTCCAGG
CCGAGCTCGACCGCACGCTCGGCGCCTCCAACGTGAAGGTGAAGAGCCTCGGCGTCGATCAGGCGCCCTTCCTCACCGAA
TACGACCCCGGCAATCCGGCGGCGGATGAGAGCGGCATGGTCAAGCTGCCCAACGTGAACATGCTCACGGAAATGGCGGA
CATGCGCGAAGCCAACCGCTCCTACGAAGCCAACCTCCAGATGATCAAGCAGACCCGCTCCATGGTGGCGATGACCGTGG
ACCTCCTGAGGACGCAGTCATGA

Upstream 100 bases:

>100_bases
AGATGCTGAAGGCGGCCGACGTCAACCGCACCTACACCCTCAACACCAACATCGTGCGTGCCTTCAACCGCATGATCCTT
ACGAGCGTTAGGAGCTCTTG

Downstream 100 bases:

>100_bases
TCGAAACCGTCTCCGCCCTGAGCTCCAGTCTGCGCACGCCCACCTCGATCTCCTCCACGAAGATGGAGACGACCGAGACC
AAGCTGACCGCCCTCAACGG

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLGASNVKVKSLGVDQAPFLTE
YDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQMIKQTRSMVAMTVDLLRTQS

Sequences:

>Translated_140_residues
MIDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLGASNVKVKSLGVDQAPFLTE
YDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQMIKQTRSMVAMTVDLLRTQS
>Mature_140_residues
MIDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTLGASNVKVKSLGVDQAPFLTE
YDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQMIKQTRSMVAMTVDLLRTQS

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=125, Percent_Identity=40.8, Blast_Score=93, Evalue=8e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15279; Mature: 15279

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTL
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHC
GASNVKVKSLGVDQAPFLTEYDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQ
CCCCEEEEECCCCCCCCEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHH
MIKQTRSMVAMTVDLLRTQS
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDPLKVAGQIAGSGLQVQAQRMRVVSENLANMRSTGSTPGADPYTRKTIQFQAELDRTL
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHC
GASNVKVKSLGVDQAPFLTEYDPGNPAADESGMVKLPNVNMLTEMADMREANRSYEANLQ
CCCCEEEEECCCCCCCCEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHH
MIKQTRSMVAMTVDLLRTQS
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194 [H]