Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is motD

Identifier: 158422247

GI number: 158422247

Start: 694697

End: 696616

Strand: Reverse

Name: motD

Synonym: AZC_0623

Alternate gene names: NA

Gene position: 696616-694697 (Counterclockwise)

Preceding gene: 158422248

Following gene: 158422246

Centisome position: 12.97

GC content: 69.79

Gene sequence:

>1920_bases
ATGAGCGCATTGAACATCTCCCGTGCCCTGCCCTCGGCCGTCACGTCCGACGTGAGCGCCGGCAAGGTCCAGGAGATGGG
CGGTGACGAGGGCGGAAACGGGTTCGCGGACGTGTTCCGCGATCTAGGCCGCGCGTCCAGGGACGGCGGCGAGAGCCTGT
CCGGCGCCAAGTCCGACAAGGCCGGCGAAGAGCAGGCCGGGCGCAACGGCAAGGCCGCCGACCAGAACGCAAAGCCGGAC
AAGGCATTTTCGCTCGCGGACGCGCTCGCCACTGCGGCGAGCAAGCGCAGCGCGGAGACCGCCTTTTCCAACGCATCCAT
CAGCTCAACTCCGGACGGCGCGACGACCGCACAAGCCTCGACCCTTCTTGCAATGTTCGACGGTGCGACACCGGGTCAGG
ACGGCGCGGATGCCTCGTCGAGCGACGTCGCGACGCCCAAGGACGACCAGGGCAAGGGCAAGTCACAGACGGAGATGGAG
CGGGCCGCGCGCGGCCGCCGGCTGGCCAATGACGGCCTCAACCGCCTGCTGTTCGGCAGCCAGGACGGCATCAACGGCCT
CAGCCCCGCCACAAAGCCTGCCGTGCTCTCGGACGACGAGATCCGCAGCGCCAACGCCGATCAGCCCCTCCTCATCAGCG
AGGCGGACGATACACAAGGTGCAACGGATGCGAACGCGTCCGCGACGCCTGCTCTGTCCGATCCGGCGGCCGTGGTCCTT
CAGGGACTGGCGCAGCTGACCGATATGGTTCCGCGCACCACCGAGGACGGCCAGACGGACGGGCGGGATGCCGCCCCCAC
GGCCGTCGTCGCGCCGAACACCGGAGACCAGGACGGCGGCACCGGACAGGGCCGGACGCTGAGCGTCTCGGTGCTCTCGC
GGGAAACCCATTTCGCCCCCATCCGCACGCTGGCCATGAATGGCGGTAGCGCACCGACGGATGCGGCGGCAACTTCCGCC
GCGGCGGCGCCCCTCGGCACCGACACGACCGTCGCCAAGCCCGAAACCCGCGCTGCGGCCGGCCTGCGCGGCCTGCGCCC
CGAGCGCCTGGCGGTGCAGGACACGCCCGGGGCCGCTCCCCTCTCCGGCAAGACCGTCATTGCGGATGCGGGAGAGGACG
CGACCACCACCGGCTCCACGCAGGCGACCGTCGCCGATGCTGCCCGCACCGGCACCCGGCAGGACAGCCGCAGCGGCAAT
TCCGGCAAGGACGACCGGAACCAGCCCGACACCCAGCGCCTGACCGAAACCACGGCTGAGGCCGCGCGATCGGACGTGAA
GCAGGGCCAGACCTCAAATGTCAGCGAAGCCGCCCACGGCACGGCAGAGACCGCGCCGCTGACCGGAACCGCCGGCATCG
CTCCGACCAATGCCATCGCCACGCCCAACCTGCCGGCCCTCCAGCAGATCGGTGCAGCCATCGCGGCCGAAGCCACCTCC
ATGGACCAGGGCGCCGGCATCGCCAGCGCGGATTCTTCCACTGCGCAGGTTCTCGCCGGGCCGGTCCGCATCCTGCAGAT
CCAGCTCAAGCCGGACGAACTCGGCACGGTGAACGTGCGCATGCGGCTCAGCGGCGGTACGCTGGAGATCCAGTTGCGCG
CCAGCAATCCGGAAACCGCCCGGATGCTGGAGCGTGATCGCGACGCCCTCACCGACCTGCTCAAGGCGTCCGGGATTTCC
GCCGATACGATCTCCATCGTCGGTATCGACGGGGGCACGAGCCAGATCACCGGCCGCGATGCCGGCCGTCCCTTCGAGGG
CGACGGCGCCCAGACGCAGCCCGAGGCGCGGGATTCCCGTGATGGCCTCGACCAGGATAACCGCGGCTCCGGCAACGACG
ACAGCCAGAAAGGAGGCAGGGATGATGAAGCGCGCAACCGTAGCCGTTCTGCTGACGCTGGCTTCGATTTCCGCGTTTAG

Upstream 100 bases:

>100_bases
AGCCCTCGCTCTTCGACGAAGGTTCGCCGGCTGGTGCACTCGTCAGCCGCGCGCAAGGCACGCTCGATAAGGTCGACGCA
ATGCTGAAGGAGTCGCCTTT

Downstream 100 bases:

>100_bases
TCCCGCGCAGGCCGGCCCGCCCCAGACGGTGCAGCCGGACGCCTGCGAGAAGGAACTGGTGCGGGCGGCGGCCAAGTACA
AAATCCCGCTGCCGATCCTC

Product: MotD chemotaxis protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 639; Mature: 638

Protein sequence:

>639_residues
MSALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDKAGEEQAGRNGKAADQNAKPD
KAFSLADALATAASKRSAETAFSNASISSTPDGATTAQASTLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEME
RAARGRRLANDGLNRLLFGSQDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL
QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAPIRTLAMNGGSAPTDAAATSA
AAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAPLSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGN
SGKDDRNQPDTQRLTETTAEAARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS
MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETARMLERDRDALTDLLKASGIS
ADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSRDGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV

Sequences:

>Translated_639_residues
MSALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDKAGEEQAGRNGKAADQNAKPD
KAFSLADALATAASKRSAETAFSNASISSTPDGATTAQASTLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEME
RAARGRRLANDGLNRLLFGSQDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL
QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAPIRTLAMNGGSAPTDAAATSA
AAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAPLSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGN
SGKDDRNQPDTQRLTETTAEAARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS
MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETARMLERDRDALTDLLKASGIS
ADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSRDGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV
>Mature_638_residues
SALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDKAGEEQAGRNGKAADQNAKPDK
AFSLADALATAASKRSAETAFSNASISSTPDGATTAQASTLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEMER
AARGRRLANDGLNRLLFGSQDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVLQ
GLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAPIRTLAMNGGSAPTDAAATSAA
AAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAPLSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGNS
GKDDRNQPDTQRLTETTAEAARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATSM
DQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETARMLERDRDALTDLLKASGISA
DTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSRDGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64718; Mature: 64586

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDK
CCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGEEQAGRNGKAADQNAKPDKAFSLADALATAASKRSAETAFSNASISSTPDGATTAQAS
CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
TLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEMERAARGRRLANDGLNRLLFGS
HHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHEEECC
QDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAP
HHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
IRTLAMNGGSAPTDAAATSAAAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAP
EEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCC
LSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGNSGKDDRNQPDTQRLTETTAE
CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS
HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETA
CCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCHHH
RMLERDRDALTDLLKASGISADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSR
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHH
DGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDK
CCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
AGEEQAGRNGKAADQNAKPDKAFSLADALATAASKRSAETAFSNASISSTPDGATTAQAS
CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
TLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEMERAARGRRLANDGLNRLLFGS
HHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHEEECC
QDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAP
HHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
IRTLAMNGGSAPTDAAATSAAAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAP
EEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCC
LSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGNSGKDDRNQPDTQRLTETTAE
CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS
HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETA
CCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCHHH
RMLERDRDALTDLLKASGISADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSR
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHH
DGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA