| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is motD
Identifier: 158422247
GI number: 158422247
Start: 694697
End: 696616
Strand: Reverse
Name: motD
Synonym: AZC_0623
Alternate gene names: NA
Gene position: 696616-694697 (Counterclockwise)
Preceding gene: 158422248
Following gene: 158422246
Centisome position: 12.97
GC content: 69.79
Gene sequence:
>1920_bases ATGAGCGCATTGAACATCTCCCGTGCCCTGCCCTCGGCCGTCACGTCCGACGTGAGCGCCGGCAAGGTCCAGGAGATGGG CGGTGACGAGGGCGGAAACGGGTTCGCGGACGTGTTCCGCGATCTAGGCCGCGCGTCCAGGGACGGCGGCGAGAGCCTGT CCGGCGCCAAGTCCGACAAGGCCGGCGAAGAGCAGGCCGGGCGCAACGGCAAGGCCGCCGACCAGAACGCAAAGCCGGAC AAGGCATTTTCGCTCGCGGACGCGCTCGCCACTGCGGCGAGCAAGCGCAGCGCGGAGACCGCCTTTTCCAACGCATCCAT CAGCTCAACTCCGGACGGCGCGACGACCGCACAAGCCTCGACCCTTCTTGCAATGTTCGACGGTGCGACACCGGGTCAGG ACGGCGCGGATGCCTCGTCGAGCGACGTCGCGACGCCCAAGGACGACCAGGGCAAGGGCAAGTCACAGACGGAGATGGAG CGGGCCGCGCGCGGCCGCCGGCTGGCCAATGACGGCCTCAACCGCCTGCTGTTCGGCAGCCAGGACGGCATCAACGGCCT CAGCCCCGCCACAAAGCCTGCCGTGCTCTCGGACGACGAGATCCGCAGCGCCAACGCCGATCAGCCCCTCCTCATCAGCG AGGCGGACGATACACAAGGTGCAACGGATGCGAACGCGTCCGCGACGCCTGCTCTGTCCGATCCGGCGGCCGTGGTCCTT CAGGGACTGGCGCAGCTGACCGATATGGTTCCGCGCACCACCGAGGACGGCCAGACGGACGGGCGGGATGCCGCCCCCAC GGCCGTCGTCGCGCCGAACACCGGAGACCAGGACGGCGGCACCGGACAGGGCCGGACGCTGAGCGTCTCGGTGCTCTCGC GGGAAACCCATTTCGCCCCCATCCGCACGCTGGCCATGAATGGCGGTAGCGCACCGACGGATGCGGCGGCAACTTCCGCC GCGGCGGCGCCCCTCGGCACCGACACGACCGTCGCCAAGCCCGAAACCCGCGCTGCGGCCGGCCTGCGCGGCCTGCGCCC CGAGCGCCTGGCGGTGCAGGACACGCCCGGGGCCGCTCCCCTCTCCGGCAAGACCGTCATTGCGGATGCGGGAGAGGACG CGACCACCACCGGCTCCACGCAGGCGACCGTCGCCGATGCTGCCCGCACCGGCACCCGGCAGGACAGCCGCAGCGGCAAT TCCGGCAAGGACGACCGGAACCAGCCCGACACCCAGCGCCTGACCGAAACCACGGCTGAGGCCGCGCGATCGGACGTGAA GCAGGGCCAGACCTCAAATGTCAGCGAAGCCGCCCACGGCACGGCAGAGACCGCGCCGCTGACCGGAACCGCCGGCATCG CTCCGACCAATGCCATCGCCACGCCCAACCTGCCGGCCCTCCAGCAGATCGGTGCAGCCATCGCGGCCGAAGCCACCTCC ATGGACCAGGGCGCCGGCATCGCCAGCGCGGATTCTTCCACTGCGCAGGTTCTCGCCGGGCCGGTCCGCATCCTGCAGAT CCAGCTCAAGCCGGACGAACTCGGCACGGTGAACGTGCGCATGCGGCTCAGCGGCGGTACGCTGGAGATCCAGTTGCGCG CCAGCAATCCGGAAACCGCCCGGATGCTGGAGCGTGATCGCGACGCCCTCACCGACCTGCTCAAGGCGTCCGGGATTTCC GCCGATACGATCTCCATCGTCGGTATCGACGGGGGCACGAGCCAGATCACCGGCCGCGATGCCGGCCGTCCCTTCGAGGG CGACGGCGCCCAGACGCAGCCCGAGGCGCGGGATTCCCGTGATGGCCTCGACCAGGATAACCGCGGCTCCGGCAACGACG ACAGCCAGAAAGGAGGCAGGGATGATGAAGCGCGCAACCGTAGCCGTTCTGCTGACGCTGGCTTCGATTTCCGCGTTTAG
Upstream 100 bases:
>100_bases AGCCCTCGCTCTTCGACGAAGGTTCGCCGGCTGGTGCACTCGTCAGCCGCGCGCAAGGCACGCTCGATAAGGTCGACGCA ATGCTGAAGGAGTCGCCTTT
Downstream 100 bases:
>100_bases TCCCGCGCAGGCCGGCCCGCCCCAGACGGTGCAGCCGGACGCCTGCGAGAAGGAACTGGTGCGGGCGGCGGCCAAGTACA AAATCCCGCTGCCGATCCTC
Product: MotD chemotaxis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MSALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDKAGEEQAGRNGKAADQNAKPD KAFSLADALATAASKRSAETAFSNASISSTPDGATTAQASTLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEME RAARGRRLANDGLNRLLFGSQDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAPIRTLAMNGGSAPTDAAATSA AAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAPLSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGN SGKDDRNQPDTQRLTETTAEAARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETARMLERDRDALTDLLKASGIS ADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSRDGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV
Sequences:
>Translated_639_residues MSALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDKAGEEQAGRNGKAADQNAKPD KAFSLADALATAASKRSAETAFSNASISSTPDGATTAQASTLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEME RAARGRRLANDGLNRLLFGSQDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAPIRTLAMNGGSAPTDAAATSA AAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAPLSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGN SGKDDRNQPDTQRLTETTAEAARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETARMLERDRDALTDLLKASGIS ADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSRDGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV >Mature_638_residues SALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDKAGEEQAGRNGKAADQNAKPDK AFSLADALATAASKRSAETAFSNASISSTPDGATTAQASTLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEMER AARGRRLANDGLNRLLFGSQDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVLQ GLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAPIRTLAMNGGSAPTDAAATSAA AAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAPLSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGNS GKDDRNQPDTQRLTETTAEAARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATSM DQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETARMLERDRDALTDLLKASGISA DTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSRDGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64718; Mature: 64586
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDK CCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC AGEEQAGRNGKAADQNAKPDKAFSLADALATAASKRSAETAFSNASISSTPDGATTAQAS CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH TLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEMERAARGRRLANDGLNRLLFGS HHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHEEECC QDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL CCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAP HHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC IRTLAMNGGSAPTDAAATSAAAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAP EEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCC LSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGNSGKDDRNQPDTQRLTETTAE CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETA CCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCHHH RMLERDRDALTDLLKASGISADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSR HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHH DGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SALNISRALPSAVTSDVSAGKVQEMGGDEGGNGFADVFRDLGRASRDGGESLSGAKSDK CCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC AGEEQAGRNGKAADQNAKPDKAFSLADALATAASKRSAETAFSNASISSTPDGATTAQAS CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH TLLAMFDGATPGQDGADASSSDVATPKDDQGKGKSQTEMERAARGRRLANDGLNRLLFGS HHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHEEECC QDGINGLSPATKPAVLSDDEIRSANADQPLLISEADDTQGATDANASATPALSDPAAVVL CCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH QGLAQLTDMVPRTTEDGQTDGRDAAPTAVVAPNTGDQDGGTGQGRTLSVSVLSRETHFAP HHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC IRTLAMNGGSAPTDAAATSAAAAPLGTDTTVAKPETRAAAGLRGLRPERLAVQDTPGAAP EEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCC LSGKTVIADAGEDATTTGSTQATVADAARTGTRQDSRSGNSGKDDRNQPDTQRLTETTAE CCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AARSDVKQGQTSNVSEAAHGTAETAPLTGTAGIAPTNAIATPNLPALQQIGAAIAAEATS HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC MDQGAGIASADSSTAQVLAGPVRILQIQLKPDELGTVNVRMRLSGGTLEIQLRASNPETA CCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCEEEEEEEECCCEEEEEEECCCCHHH RMLERDRDALTDLLKASGISADTISIVGIDGGTSQITGRDAGRPFEGDGAQTQPEARDSR HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHH DGLDQDNRGSGNDDSQKGGRDDEARNRSRSADAGFDFRV CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA