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The map label for this gene is hupJ [H]

Identifier: 158422229

GI number: 158422229

Start: 671633

End: 672538

Strand: Direct

Name: hupJ [H]

Synonym: AZC_0605

Alternate gene names: 158422229

Gene position: 671633-672538 (Clockwise)

Preceding gene: 158422228

Following gene: 158422230

Centisome position: 12.51

GC content: 70.09

Gene sequence:

>906_bases
GTGACCGCCTCCCTGCGCTTTGAAGGCTCCTATCGCGGTCAGGCCGCGACGCTCGACCCGGCGACCCGGCTCGAATGCAA
GATCTGCTGGCACGTCTATGATCCGGCGGAGGGCTGCGAGGTGTGGCAGGTGCCGCCGGGCACGCCTTTCACCGCCTTGC
CGGACCACTGGCGCTGCCCGGTGTGCGACGGGGCGCGCGACCAGTTCATGGTGCTCGATGGGGGCGCGCCAGAGGCTCGC
CCTGCGTCGGCGGCGGCTGAGCCGGATGTGGACCCGCGCCTTCTCGCCATCGCCCGCGATGTGCCGGGCAAGCTGGAAGC
CGCGTTCCGAGAGATCCATGCCGGCCAGATGCGCGGCGTGCCCATGGTCAACGAGACCCTGAGCGTGAAGGCCGTAGGCT
TCCGGGTGCATGAGGGGCGGGTGCTGGGCATGCTCATCACCCCCTGGTTCATGAACCTTATCCTGCTGCCGGGGCCGGAT
GAGGACTGGAGCCATCTCGCCACGGGCGCGAAGGACCTGGTGGAGTTCCCGTCCGGCTTCTATGAGTTCCTGGCCGCCCA
GCGACCGGAGGTCGGAGCCTATAAGGCCTGCTCCCTCTTCTCGCCCATGTTCGATTTCTCCTCCATGTTGCAGGCGGTCG
AGACCGCGCAGGCGGCCCTCGTCGCGCTATTCGATCCGGCCCATCGCGAGCCCGGCGTGCCGAGCGCCGAAATCCGCCGC
CGACGCGAGGCGGAGCTGGCGGCAAAGGAGGCGGCGCAGCCCAAGCTGCCGGACCTCGCGCCTGAAGGTGAGCCTGAGGC
CGAGGACGGAGCCGAGGCGTTGCCGCAGACGCTGGTGCCGCCGCCCGAACGCTCCCGGCGGGAGATGATCTTCGGCCGTT
CCGCGCGTCCGGCGGGGGCCCCATGA

Upstream 100 bases:

>100_bases
ACGTCTCTGCCGGAGGTGGCGCAGGCCGCGCCCGAGGACATTGCCGACAGCGCCGCGCGCCTTGCGCAGGTGCTGGACGC
TCTGGCGTGAGGAGACCCGC

Downstream 100 bases:

>100_bases
GCCCGCTCGCCGCCAGCGCTGTCCTCGCGCATCGCCGGGGATTCTCCGCGCCTGCGTTCACCGACGCGGGCCGCTGGCTG
GCGGGCCGGCCGGTGGAAGA

Product: rubredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTASLRFEGSYRGQAATLDPATRLECKICWHVYDPAEGCEVWQVPPGTPFTALPDHWRCPVCDGARDQFMVLDGGAPEAR
PASAAAEPDVDPRLLAIARDVPGKLEAAFREIHAGQMRGVPMVNETLSVKAVGFRVHEGRVLGMLITPWFMNLILLPGPD
EDWSHLATGAKDLVEFPSGFYEFLAAQRPEVGAYKACSLFSPMFDFSSMLQAVETAQAALVALFDPAHREPGVPSAEIRR
RREAELAAKEAAQPKLPDLAPEGEPEAEDGAEALPQTLVPPPERSRREMIFGRSARPAGAP

Sequences:

>Translated_301_residues
MTASLRFEGSYRGQAATLDPATRLECKICWHVYDPAEGCEVWQVPPGTPFTALPDHWRCPVCDGARDQFMVLDGGAPEAR
PASAAAEPDVDPRLLAIARDVPGKLEAAFREIHAGQMRGVPMVNETLSVKAVGFRVHEGRVLGMLITPWFMNLILLPGPD
EDWSHLATGAKDLVEFPSGFYEFLAAQRPEVGAYKACSLFSPMFDFSSMLQAVETAQAALVALFDPAHREPGVPSAEIRR
RREAELAAKEAAQPKLPDLAPEGEPEAEDGAEALPQTLVPPPERSRREMIFGRSARPAGAP
>Mature_300_residues
TASLRFEGSYRGQAATLDPATRLECKICWHVYDPAEGCEVWQVPPGTPFTALPDHWRCPVCDGARDQFMVLDGGAPEARP
ASAAAEPDVDPRLLAIARDVPGKLEAAFREIHAGQMRGVPMVNETLSVKAVGFRVHEGRVLGMLITPWFMNLILLPGPDE
DWSHLATGAKDLVEFPSGFYEFLAAQRPEVGAYKACSLFSPMFDFSSMLQAVETAQAALVALFDPAHREPGVPSAEIRRR
REAELAAKEAAQPKLPDLAPEGEPEAEDGAEALPQTLVPPPERSRREMIFGRSARPAGAP

Specific function: Unknown

COG id: COG1773

COG function: function code C; Rubredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789366, Length=100, Percent_Identity=31, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004039
- InterPro:   IPR018527 [H]

Pfam domain/function: PF00301 Rubredoxin [H]

EC number: NA

Molecular weight: Translated: 32735; Mature: 32603

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00202 RUBREDOXIN ; PS50903 RUBREDOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASLRFEGSYRGQAATLDPATRLECKICWHVYDPAEGCEVWQVPPGTPFTALPDHWRCP
CCCEEEECCCCCCCEEECCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC
VCDGARDQFMVLDGGAPEARPASAAAEPDVDPRLLAIARDVPGKLEAAFREIHAGQMRGV
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHCCCC
PMVNETLSVKAVGFRVHEGRVLGMLITPWFMNLILLPGPDEDWSHLATGAKDLVEFPSGF
CCCCCCEEEEEEEEEEECCEEEEEEHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCHHH
YEFLAAQRPEVGAYKACSLFSPMFDFSSMLQAVETAQAALVALFDPAHREPGVPSAEIRR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RREAELAAKEAAQPKLPDLAPEGEPEAEDGAEALPQTLVPPPERSRREMIFGRSARPAGA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
P
C
>Mature Secondary Structure 
TASLRFEGSYRGQAATLDPATRLECKICWHVYDPAEGCEVWQVPPGTPFTALPDHWRCP
CCEEEECCCCCCCEEECCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC
VCDGARDQFMVLDGGAPEARPASAAAEPDVDPRLLAIARDVPGKLEAAFREIHAGQMRGV
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHCCCC
PMVNETLSVKAVGFRVHEGRVLGMLITPWFMNLILLPGPDEDWSHLATGAKDLVEFPSGF
CCCCCCEEEEEEEEEEECCEEEEEEHHHHHHCEEECCCCCCHHHHHHHHHHHHHHCCHHH
YEFLAAQRPEVGAYKACSLFSPMFDFSSMLQAVETAQAALVALFDPAHREPGVPSAEIRR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RREAELAAKEAAQPKLPDLAPEGEPEAEDGAEALPQTLVPPPERSRREMIFGRSARPAGA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190; 2007559 [H]