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The map label for this gene is nhaD

Identifier: 158422190

GI number: 158422190

Start: 625923

End: 627482

Strand: Reverse

Name: nhaD

Synonym: AZC_0566

Alternate gene names: NA

Gene position: 627482-625923 (Counterclockwise)

Preceding gene: 158422195

Following gene: 158422185

Centisome position: 11.69

GC content: 65.19

Gene sequence:

>1560_bases
TTGAGCCCTGCCCTGCTTGCATCGCCGGAAGGCATCGTCCATCAACGCTATGAACCATCCATCTACACGCGGGATGGGAC
GGGACGGCAGCGCGCCGCCCCGCTGACCGGCTCACACAGAACGAGGTGCGGCATGGCTGTAATCGGACGTTGGACCCCGC
TGGCGCTCATTCCCGCGCTCCTGGTCCCGATGTCCGCGGCCCATGCGGCCGGCGATGCGGGCTTCAGCGGCGTCGGCCTT
TCCCCGCTCTGGGGCGTGCCGTTCGCCGGCATGCTGCTCTCCATCGCTTTGTTTCCGCTGCTGGCGAGCCATTTCTGGCA
CCATCATTACGGCAAGGTCGCCCTGTTCTGGGGCCTCGCCTTCGTGGTGCCCTTCACCCTCGTCTATGGCCCCAACGTCA
CCACCCACGAGGTGGTCCATGCGGCGCTGCTGGAATACATCCCCTTCATCGTGCTGCTGGCCGCCCTGTTCACCGTCTCG
GGCGGCATTCTGGTGGCCGGGCGCATCAAGGGTGGACCGGTCACCAACACCGCGATCCTCGCGCTCGGCACAGTGCTCGC
CAGCCTCATCGGCACCACCGGCGCCTCCATGGTGCTCATCCGCCCGCTGCTGCGCGCCAATGAGGGGCGCAAGCACAACG
TGCACACGGTGGTCTTCTTCATCTTCCTGGTGTCGAACATCGGCGGCTCGCTGACGCCGCTGGGCGATCCCCCGCTCTTC
CTCGGCTTCCTGAAGGGCGTGAGCTTCTTCTGGACCACCACGCATCTTTTCCACGACACGGCGGTGGTCGCCGGCATCCT
GCTGGTGGTCTATTTCATCATGGAGAGCCTCCTCCACGCCCGCGAGGACAAGACCGCCGCGCCGGTGGAAGAAGGCGGCG
GCCGCATCGAGCTGCGCGGCCTCCAGAACGTGCCGCTGCTCATCGCCATCATCGGTGCCATCCTGCTCAGCGCTTTGTGG
AAGCCCGGCATCGTCTTCGACGTCTACGGCACCCGCGTGGAACTCCAGTGGATCGTGCGCGACGTGCTTCTCGTGCTGGT
GGCACTGGTCTCGCTCGGCATCACGCCCAAGCTGGTGCGCGAGCGCAACGGCTTCGACTGGGAGCCGATCCTCGAGGTGG
GCAAGCTGTTCGCCGCCATCTTCCTCACCATCATTCCGGTGATCGCCATCCTGAAGGCGGGCACCAACGGCGCCTTCGCG
CCGCTCGTCGATCTGGTGACCACCCCGGACGGCAAGCCCGTCAACGTCGCCTATTTCTGGCTCACCGGCATCCTGTCGTC
CTTCCTCGACAATGCGCCCACCTATCTCGTCTTCTTCAACCTCGCCGGAGGCGATGCCCACCAGCTCATGGGGCCGATGG
CGGTGACCCTGGAAGCCATCTCGGCGGGCGCGGTGTTCATGGGCGCCATGACCTATATCGGCAATGCGCCGAACTTCATG
GTGCTCTCCATCGCCCGCCACCGCGGCGTGAAGATGCCGAGCTTCTTCGGCTACATGGCCTGGTCAATCATCTTCCTGCT
GCCCTGCTTCGCCCTGCTGACCTGGCTCTATTTCATCTGA

Upstream 100 bases:

>100_bases
AAGCGGCGCACGGGTCAACCGTCCGCTCCCCCGCCGTGACCTTCGCCGTGGCAGGGTGGCGCCCTGTGCATGGCTTCCGC
CGGGGCGCAGGTGCAGCATC

Downstream 100 bases:

>100_bases
GGGCGGAAAAGCTGCCGAACAAAAAAGGCCGGCGCGTCGCGCCGGCCTTCTGCATTTCGGAATGACCTGATCTCACGCCA
CGCAGGAGAGAAAGCCGCTT

Product: Na+/H+ antiporter

Products: NA

Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MSPALLASPEGIVHQRYEPSIYTRDGTGRQRAAPLTGSHRTRCGMAVIGRWTPLALIPALLVPMSAAHAAGDAGFSGVGL
SPLWGVPFAGMLLSIALFPLLASHFWHHHYGKVALFWGLAFVVPFTLVYGPNVTTHEVVHAALLEYIPFIVLLAALFTVS
GGILVAGRIKGGPVTNTAILALGTVLASLIGTTGASMVLIRPLLRANEGRKHNVHTVVFFIFLVSNIGGSLTPLGDPPLF
LGFLKGVSFFWTTTHLFHDTAVVAGILLVVYFIMESLLHAREDKTAAPVEEGGGRIELRGLQNVPLLIAIIGAILLSALW
KPGIVFDVYGTRVELQWIVRDVLLVLVALVSLGITPKLVRERNGFDWEPILEVGKLFAAIFLTIIPVIAILKAGTNGAFA
PLVDLVTTPDGKPVNVAYFWLTGILSSFLDNAPTYLVFFNLAGGDAHQLMGPMAVTLEAISAGAVFMGAMTYIGNAPNFM
VLSIARHRGVKMPSFFGYMAWSIIFLLPCFALLTWLYFI

Sequences:

>Translated_519_residues
MSPALLASPEGIVHQRYEPSIYTRDGTGRQRAAPLTGSHRTRCGMAVIGRWTPLALIPALLVPMSAAHAAGDAGFSGVGL
SPLWGVPFAGMLLSIALFPLLASHFWHHHYGKVALFWGLAFVVPFTLVYGPNVTTHEVVHAALLEYIPFIVLLAALFTVS
GGILVAGRIKGGPVTNTAILALGTVLASLIGTTGASMVLIRPLLRANEGRKHNVHTVVFFIFLVSNIGGSLTPLGDPPLF
LGFLKGVSFFWTTTHLFHDTAVVAGILLVVYFIMESLLHAREDKTAAPVEEGGGRIELRGLQNVPLLIAIIGAILLSALW
KPGIVFDVYGTRVELQWIVRDVLLVLVALVSLGITPKLVRERNGFDWEPILEVGKLFAAIFLTIIPVIAILKAGTNGAFA
PLVDLVTTPDGKPVNVAYFWLTGILSSFLDNAPTYLVFFNLAGGDAHQLMGPMAVTLEAISAGAVFMGAMTYIGNAPNFM
VLSIARHRGVKMPSFFGYMAWSIIFLLPCFALLTWLYFI
>Mature_518_residues
SPALLASPEGIVHQRYEPSIYTRDGTGRQRAAPLTGSHRTRCGMAVIGRWTPLALIPALLVPMSAAHAAGDAGFSGVGLS
PLWGVPFAGMLLSIALFPLLASHFWHHHYGKVALFWGLAFVVPFTLVYGPNVTTHEVVHAALLEYIPFIVLLAALFTVSG
GILVAGRIKGGPVTNTAILALGTVLASLIGTTGASMVLIRPLLRANEGRKHNVHTVVFFIFLVSNIGGSLTPLGDPPLFL
GFLKGVSFFWTTTHLFHDTAVVAGILLVVYFIMESLLHAREDKTAAPVEEGGGRIELRGLQNVPLLIAIIGAILLSALWK
PGIVFDVYGTRVELQWIVRDVLLVLVALVSLGITPKLVRERNGFDWEPILEVGKLFAAIFLTIIPVIAILKAGTNGAFAP
LVDLVTTPDGKPVNVAYFWLTGILSSFLDNAPTYLVFFNLAGGDAHQLMGPMAVTLEAISAGAVFMGAMTYIGNAPNFMV
LSIARHRGVKMPSFFGYMAWSIIFLLPCFALLTWLYFI

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55838; Mature: 55707

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPALLASPEGIVHQRYEPSIYTRDGTGRQRAAPLTGSHRTRCGMAVIGRWTPLALIPAL
CCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
LVPMSAAHAAGDAGFSGVGLSPLWGVPFAGMLLSIALFPLLASHFWHHHYGKVALFWGLA
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
FVVPFTLVYGPNVTTHEVVHAALLEYIPFIVLLAALFTVSGGILVAGRIKGGPVTNTAIL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
ALGTVLASLIGTTGASMVLIRPLLRANEGRKHNVHTVVFFIFLVSNIGGSLTPLGDPPLF
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
LGFLKGVSFFWTTTHLFHDTAVVAGILLVVYFIMESLLHAREDKTAAPVEEGGGRIELRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEC
LQNVPLLIAIIGAILLSALWKPGIVFDVYGTRVELQWIVRDVLLVLVALVSLGITPKLVR
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHH
ERNGFDWEPILEVGKLFAAIFLTIIPVIAILKAGTNGAFAPLVDLVTTPDGKPVNVAYFW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEHHHHH
LTGILSSFLDNAPTYLVFFNLAGGDAHQLMGPMAVTLEAISAGAVFMGAMTYIGNAPNFM
HHHHHHHHHCCCCEEEEEEEECCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCCCE
VLSIARHRGVKMPSFFGYMAWSIIFLLPCFALLTWLYFI
EEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SPALLASPEGIVHQRYEPSIYTRDGTGRQRAAPLTGSHRTRCGMAVIGRWTPLALIPAL
CCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHH
LVPMSAAHAAGDAGFSGVGLSPLWGVPFAGMLLSIALFPLLASHFWHHHYGKVALFWGLA
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
FVVPFTLVYGPNVTTHEVVHAALLEYIPFIVLLAALFTVSGGILVAGRIKGGPVTNTAIL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
ALGTVLASLIGTTGASMVLIRPLLRANEGRKHNVHTVVFFIFLVSNIGGSLTPLGDPPLF
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
LGFLKGVSFFWTTTHLFHDTAVVAGILLVVYFIMESLLHAREDKTAAPVEEGGGRIELRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEEC
LQNVPLLIAIIGAILLSALWKPGIVFDVYGTRVELQWIVRDVLLVLVALVSLGITPKLVR
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHH
ERNGFDWEPILEVGKLFAAIFLTIIPVIAILKAGTNGAFAPLVDLVTTPDGKPVNVAYFW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEHHHHH
LTGILSSFLDNAPTYLVFFNLAGGDAHQLMGPMAVTLEAISAGAVFMGAMTYIGNAPNFM
HHHHHHHHHCCCCEEEEEEEECCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCCCCE
VLSIARHRGVKMPSFFGYMAWSIIFLLPCFALLTWLYFI
EEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA