| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422111
Identifier: 158422111
GI number: 158422111
Start: 543362
End: 544198
Strand: Reverse
Name: 158422111
Synonym: AZC_0487
Alternate gene names: NA
Gene position: 544198-543362 (Counterclockwise)
Preceding gene: 158422113
Following gene: 158422110
Centisome position: 10.13
GC content: 72.4
Gene sequence:
>837_bases ATGATGATCAGCCGCCGCGCCCTCCTCCAGTCCGCCGCCCTCGCCGCCGCCGTGCCGCTGGCGCAGCGGGCGGCGGCCGC GCCGCTGAGCCGGCCGGTGCAGGACCCAAACGCCCAGACCCGCCTCATCGCCGGCCCGGCGCAGGATGGGGTGGTCCAGG CCGGACTGGAGATGGTGCTGGCGCCGGGCTGGAAGACCTACTGGCGCTATCCGGGCGACAGCGGCGTGCCGCCGCGCTTC GACTGGAGCGGCTCGAAGAATGTCGCGGACGTCACCGTGCTGTGGCCGGCGCCCCATGTCTTTCCCGACGGGTCCGGCGG ATCGTCCATCGGCTACAAGGGCCGCGTGCTCCTGCCGCTCGTGGTGCGCCTGAAGAACCCGGCCGACCCGGCCGAACTGG ACCTCGCACTGGATTTCGCCGTCTGCCAGTCCCTGTGCGTCCCGGCGGATGCGCGTCTCAGCGTGCCGCTTCCCGGTACC GAGGCCGAAGCGCCCGCACTCACGGAAGCGCGGGCGGAAGTTCCGGTGGCAACACCCTTCGGTGCCGGCAGTGGGCCGGC AGTGCTGAAGGTGGAACGGGACGCCGGGACGACCCCGCCCCGCCTCATCATCACGGCACGGGCCTCTGCGGAGGCCGTGC TCCTGGTGGAGGGGCCGGATGACACCTGGGCCCTGCCCATTCCCGAACGCCAGCCCGCCGCCGGCGAGACAGTGCGCTTC ACCCTGCCGCTGCTCGGCGTTCCGTCCGATGCGCGGCTGCCCGGCAACAAGCTGACGCTGACGCTTGTGGACGGGGCGAA GGCCATCGAAACCACGACAGCGATTCCCGGCGCCTGA
Upstream 100 bases:
>100_bases GCCCGGCGCCTTCGCTCCCAGCGCCTCCAGTCATTGGCGTCACGGGAATTTGCGCACCGTGGCCTTTACGATGCGCCGGT CTCCGCGATAGCGCAGAGGC
Downstream 100 bases:
>100_bases GGCGCCGATTGGCGCTTTCCTTGCGGTCAAAACGACCTATTCTCCGCTGCGCCGGCCAAGCCCGGCCCGCCTCCGGCGCA CGGCCGGACGGCGCCAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C Biogenesis Protein Transmembrane Region; ThiolDisulfide Interchange Protein DsbD; ThiolDisulfide Interchange Protein; Metal Resistance Protein; ThiolDisulfide Interchange; Copper-Sensitivity B Suppressor; Cytochrome C Biogenesis Protein Transmembrane Protein; Cytochrome C Biogenesis Transmembrane Protein; Protein-Disulfide Reductase; Signal Peptide; Cytochrome C Biogenesis Protein Transmembrane; Signal Peptide Protein; ThioDisulfide Interchange Protein; Copper Sensitivity Suppressor Membrane Protein B; Thiol-Disulfide Interchange Protein DsbD-Like Protein; Thiol-Disulfide Interchange Protein DsbD Homolog
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MMISRRALLQSAALAAAVPLAQRAAAAPLSRPVQDPNAQTRLIAGPAQDGVVQAGLEMVLAPGWKTYWRYPGDSGVPPRF DWSGSKNVADVTVLWPAPHVFPDGSGGSSIGYKGRVLLPLVVRLKNPADPAELDLALDFAVCQSLCVPADARLSVPLPGT EAEAPALTEARAEVPVATPFGAGSGPAVLKVERDAGTTPPRLIITARASAEAVLLVEGPDDTWALPIPERQPAAGETVRF TLPLLGVPSDARLPGNKLTLTLVDGAKAIETTTAIPGA
Sequences:
>Translated_278_residues MMISRRALLQSAALAAAVPLAQRAAAAPLSRPVQDPNAQTRLIAGPAQDGVVQAGLEMVLAPGWKTYWRYPGDSGVPPRF DWSGSKNVADVTVLWPAPHVFPDGSGGSSIGYKGRVLLPLVVRLKNPADPAELDLALDFAVCQSLCVPADARLSVPLPGT EAEAPALTEARAEVPVATPFGAGSGPAVLKVERDAGTTPPRLIITARASAEAVLLVEGPDDTWALPIPERQPAAGETVRF TLPLLGVPSDARLPGNKLTLTLVDGAKAIETTTAIPGA >Mature_278_residues MMISRRALLQSAALAAAVPLAQRAAAAPLSRPVQDPNAQTRLIAGPAQDGVVQAGLEMVLAPGWKTYWRYPGDSGVPPRF DWSGSKNVADVTVLWPAPHVFPDGSGGSSIGYKGRVLLPLVVRLKNPADPAELDLALDFAVCQSLCVPADARLSVPLPGT EAEAPALTEARAEVPVATPFGAGSGPAVLKVERDAGTTPPRLIITARASAEAVLLVEGPDDTWALPIPERQPAAGETVRF TLPLLGVPSDARLPGNKLTLTLVDGAKAIETTTAIPGA
Specific function: Unknown
COG id: COG4233
COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28782; Mature: 28782
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMISRRALLQSAALAAAVPLAQRAAAAPLSRPVQDPNAQTRLIAGPAQDGVVQAGLEMVL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHCCEEEE APGWKTYWRYPGDSGVPPRFDWSGSKNVADVTVLWPAPHVFPDGSGGSSIGYKGRVLLPL CCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHEEE VVRLKNPADPAELDLALDFAVCQSLCVPADARLSVPLPGTEAEAPALTEARAEVPVATPF EEEECCCCCCCCEEEEEEHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHCCCCEECCC GAGSGPAVLKVERDAGTTPPRLIITARASAEAVLLVEGPDDTWALPIPERQPAAGETVRF CCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEE TLPLLGVPSDARLPGNKLTLTLVDGAKAIETTTAIPGA EEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCC >Mature Secondary Structure MMISRRALLQSAALAAAVPLAQRAAAAPLSRPVQDPNAQTRLIAGPAQDGVVQAGLEMVL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHCCEEEE APGWKTYWRYPGDSGVPPRFDWSGSKNVADVTVLWPAPHVFPDGSGGSSIGYKGRVLLPL CCCCHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHEEE VVRLKNPADPAELDLALDFAVCQSLCVPADARLSVPLPGTEAEAPALTEARAEVPVATPF EEEECCCCCCCCEEEEEEHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHCCCCEECCC GAGSGPAVLKVERDAGTTPPRLIITARASAEAVLLVEGPDDTWALPIPERQPAAGETVRF CCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEE TLPLLGVPSDARLPGNKLTLTLVDGAKAIETTTAIPGA EEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA