| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is pntB [H]
Identifier: 158422056
GI number: 158422056
Start: 485497
End: 486894
Strand: Direct
Name: pntB [H]
Synonym: AZC_0432
Alternate gene names: 158422056
Gene position: 485497-486894 (Clockwise)
Preceding gene: 158422055
Following gene: 158422059
Centisome position: 9.04
GC content: 66.81
Gene sequence:
>1398_bases ATGACTGCCAATCTGGCCGCCCTGCTTTATCTCATCGCGGGCATCCTGTTCATCCTGGCGCTGCGGGGCCTCTCGCATCC CACCACGTCGCGGCAGGGCAACCTGTTCGGCATGGTCGGCATGGGCATCGCCGTGCTCACCACGCTGGCGCTCTCCCCGC CCGCCGACGCGTTCGGCTGGGTGCTGGTGATCGCGGGCATCGCCATCGGCGCCGGTGTCGGCGCCGTTGTGGCCCGCCGC ATCGCCATGACCGCCATGCCGCAGCTCGTCGCCGCCTTCCACTCGCTGGTGGGCCTCGCGGCAGTGCTGGTCGCGGCTGC CGCGCTCTATGCGCCCGCCGCCTTCGGCATCGGTGACTACGGCCACATCCACGGCGCGAGCCTCGTGGAAATGGTGCTCG GCGTCGCCATCGGCGCCATCACCTTCACCGGTTCGGTGATCGCGTTCGCCAAGCTCAACGGCAACATGTCGGGCAAGCCG ATCATGCTGCCGGGCCGGCACTACATCAACGGCGGTCTGACGCTGCTGCTGCTGGTGCTGATCGTCGCCTTCGTGATGAC CGGTTCGTCGGTGCTGTTCTGGCTCATCACCATCCTGTCGCTGGTGCTCGGCGGCCTGCTGATCATCCCGATCGGCGGCG CCGACATGCCGGTGGTCGTCTCCATGCTCAACTCCTATTCGGGTTGGGCGGCGGCCGGCATCGGCTTCACGCTGGGCAAC ACCGCGCTCATCATCACCGGCGCGCTGGTCGGCTCCTCCGGCGCCATCCTGTCCTACATCATGTGTAAGGGCATGAACCG CTCCTTCATCTCGGTCATCCTCGGCGGCTTCGGCGGCGAGGTGGCGGGTGCGGCCGGCGGCGCGGTGGAAGCCCGCCCCG TGAAGCAGGGCTCGGCGGACGACGCGGCCTACATCATGAAGAACGCCCAGAAGGTCATCATCGTGCCGGGCTACGGCATG GCGGTGGCGCAGGCCCAGCACGCCTTGCGCGAGATGGCCGACAAGCTGAAGGCGGAAGGCGTCGAGGTGAAGTACGCCAT CCACCCCGTGGCGGGCCGCATGCCGGGGCATATGAACGTGCTGCTGGCGGAAGCCCAGGTGCCGTACGACGAGGTCTTCG AGCTCGAGGACATCAACTCGGAGTTCGCCCAGGCGGACGTGGCCTTCGTCATCGGCGCCAACGACGTGACCAACCCCGCC GCAAAGACGGATCCGGCCTCGCCCATCTTCGGCATGCCGATCCTCGACGTGGAGAAGGCCAAGACCGTTCTCTTCATCAA GCGCGGCATGGGCTCGGGCTATGCGGGCGTGGAGAACGAACTGTTCTTCCGAGACAACACCCTGATGCTCTTCGGCGACG CCAAGAAGGTCACCGAGGAAGTGGTGAAGAACCTCTGA
Upstream 100 bases:
>100_bases TTCATCGCACTGATCTTTGCATCGGTGAACATCTTCGGCGGCTTCCTCGTGACCAGCCGAATGCTCGCCATGTACCAGAA GAAGAAGTGAGGGCGCACCG
Downstream 100 bases:
>100_bases TCGGGTTCTTCCCGCAGGATCGAAACGAGAAGGCCCCGGAGCGATGCTCCGGGGCCTTTGTTTTGGCAAGGCGTTGCGGT TCCGGTCGGGATCGAGCGGT
Product: NAD(P) transhydrogenase subunit beta precursor
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Proton-translocating transhydrogenase NADP(H)-binding component; Pyridine nucleotide transhydrogenase subunit beta; dIII [H]
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTANLAALLYLIAGILFILALRGLSHPTTSRQGNLFGMVGMGIAVLTTLALSPPADAFGWVLVIAGIAIGAGVGAVVARR IAMTAMPQLVAAFHSLVGLAAVLVAAAALYAPAAFGIGDYGHIHGASLVEMVLGVAIGAITFTGSVIAFAKLNGNMSGKP IMLPGRHYINGGLTLLLLVLIVAFVMTGSSVLFWLITILSLVLGGLLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLGN TALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGEVAGAAGGAVEARPVKQGSADDAAYIMKNAQKVIIVPGYGM AVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEAQVPYDEVFELEDINSEFAQADVAFVIGANDVTNPA AKTDPASPIFGMPILDVEKAKTVLFIKRGMGSGYAGVENELFFRDNTLMLFGDAKKVTEEVVKNL
Sequences:
>Translated_465_residues MTANLAALLYLIAGILFILALRGLSHPTTSRQGNLFGMVGMGIAVLTTLALSPPADAFGWVLVIAGIAIGAGVGAVVARR IAMTAMPQLVAAFHSLVGLAAVLVAAAALYAPAAFGIGDYGHIHGASLVEMVLGVAIGAITFTGSVIAFAKLNGNMSGKP IMLPGRHYINGGLTLLLLVLIVAFVMTGSSVLFWLITILSLVLGGLLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLGN TALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGEVAGAAGGAVEARPVKQGSADDAAYIMKNAQKVIIVPGYGM AVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEAQVPYDEVFELEDINSEFAQADVAFVIGANDVTNPA AKTDPASPIFGMPILDVEKAKTVLFIKRGMGSGYAGVENELFFRDNTLMLFGDAKKVTEEVVKNL >Mature_464_residues TANLAALLYLIAGILFILALRGLSHPTTSRQGNLFGMVGMGIAVLTTLALSPPADAFGWVLVIAGIAIGAGVGAVVARRI AMTAMPQLVAAFHSLVGLAAVLVAAAALYAPAAFGIGDYGHIHGASLVEMVLGVAIGAITFTGSVIAFAKLNGNMSGKPI MLPGRHYINGGLTLLLLVLIVAFVMTGSSVLFWLITILSLVLGGLLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLGNT ALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGEVAGAAGGAVEARPVKQGSADDAAYIMKNAQKVIIVPGYGMA VAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNVLLAEAQVPYDEVFELEDINSEFAQADVAFVIGANDVTNPAA KTDPASPIFGMPILDVEKAKTVLFIKRGMGSGYAGVENELFFRDNTLMLFGDAKKVTEEVVKNL
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=472, Percent_Identity=45.3389830508475, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI122939153, Length=472, Percent_Identity=45.3389830508475, Blast_Score=372, Evalue=1e-103, Organism=Escherichia coli, GI1787886, Length=478, Percent_Identity=53.5564853556485, Blast_Score=474, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17550456, Length=468, Percent_Identity=45.9401709401709, Blast_Score=365, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 47940; Mature: 47809
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANLAALLYLIAGILFILALRGLSHPTTSRQGNLFGMVGMGIAVLTTLALSPPADAFGW CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHH VLVIAGIAIGAGVGAVVARRIAMTAMPQLVAAFHSLVGLAAVLVAAAALYAPAAFGIGDY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GHIHGASLVEMVLGVAIGAITFTGSVIAFAKLNGNMSGKPIMLPGRHYINGGLTLLLLVL CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCHHHCCCHHHHHHHH IVAFVMTGSSVLFWLITILSLVLGGLLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLGN HHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCHHCCCEECCC TALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGEVAGAAGGAVEARPVKQGSAD CEEEEEEEHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DAAYIMKNAQKVIIVPGYGMAVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNV HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEE LLAEAQVPYDEVFELEDINSEFAQADVAFVIGANDVTNPAAKTDPASPIFGMPILDVEKA EEEECCCCHHHHHHHHHCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHC KTVLFIKRGMGSGYAGVENELFFRDNTLMLFGDAKKVTEEVVKNL CEEEEEECCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHCC >Mature Secondary Structure TANLAALLYLIAGILFILALRGLSHPTTSRQGNLFGMVGMGIAVLTTLALSPPADAFGW CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHH VLVIAGIAIGAGVGAVVARRIAMTAMPQLVAAFHSLVGLAAVLVAAAALYAPAAFGIGDY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GHIHGASLVEMVLGVAIGAITFTGSVIAFAKLNGNMSGKPIMLPGRHYINGGLTLLLLVL CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCHHHCCCHHHHHHHH IVAFVMTGSSVLFWLITILSLVLGGLLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLGN HHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCHHCCCEECCC TALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGEVAGAAGGAVEARPVKQGSAD CEEEEEEEHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DAAYIMKNAQKVIIVPGYGMAVAQAQHALREMADKLKAEGVEVKYAIHPVAGRMPGHMNV HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEE LLAEAQVPYDEVFELEDINSEFAQADVAFVIGANDVTNPAAKTDPASPIFGMPILDVEKA EEEECCCCHHHHHHHHHCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHC KTVLFIKRGMGSGYAGVENELFFRDNTLMLFGDAKKVTEEVVKNL CEEEEEECCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]