| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is iorB [H]
Identifier: 158422043
GI number: 158422043
Start: 473913
End: 476093
Strand: Reverse
Name: iorB [H]
Synonym: AZC_0419
Alternate gene names: 158422043
Gene position: 476093-473913 (Counterclockwise)
Preceding gene: 158422044
Following gene: 158422039
Centisome position: 8.87
GC content: 69.1
Gene sequence:
>2181_bases ATGAATGCCATTCTCAAAGCCGCCGAAGCCGGTCTCTCGCGCCGCGCCATCCTCAGGGCCATGGGCGGGGTCGGCATCGG CCTCGTCATCGGCACCGACATCCTGCCCACCGGCCCCGCCGCCGCGGCGACGGATGCCGCCGCCGCCAGCATCAATCCCT TCGTGCGCATCGCGCCGGACGGCACCATCACGGTGGTGGTGAAGCATCTCGACCTCGGCCAGGGCACCACCACGGGCTTT GCCACGCTGGTGGCGGAGGAACTGGACGCCGACCTCTCCAAGGTGAAGACCGAGTTCGCCCCGCTCGACCCCAAGGTCTA TGGCAATGCCGCCTTCGGCGGCGCGCAGGGCACCGGCGGCTCCACTTCCATGGCGGCAAGCTTCGACGTCTATCGCCGGG CGGGTGCTGCGGCCCGCGCCATGCTTCTGGCGGCGGGCGCCAAGGCGCTCAACGTGCCGGCGGATGCCATCACCATCACC TCCGGCACGCTGATGGCCGGCCCGAAGACCGCCACCTTCGGCGAACTCGCCGCCTCGGCCGCGCGCGAGCCGGTGCCGCA GGACCCGCCGCTCAAGAAGGCGGCCAATTACGCGCTGGTGGGCAAGGAGGGCACGCACCGCGTGGACAACCTCCTCAAGA CCACGGGCACCGCCACCTATACGCAGGACGTGAAGCTGCCCGGCATGCTGGTGGCGGTGGTGGCCCATCCCCCGCGCTTC GGCGCCAAGGCGCTGAAGGTGGACGATGCCGCCGCCCGCGCCGTGAAGGGCGTCGAGGCGGTGGTCGTGGTGCCGCAGGG CGTCGCGGTGCTGGCCAAGACCACCTATGCCGCCATGAAGGGCCGCAACGCCCTGAAGGTGGAGTGGGACGAAGCCAAGG CGGAGAAGCGCGGCACCGATGCGCTGCGCGAGGAATATCGCGCGCTGCTGGGCAAGCCTGGCAACGTGGCCGAGACCGAA GGCAATGTGGAGGACGCCTTCAAGGCGCCCGGCGTGAAGGTGGTGGAGGCGGATTTCGAATTTCCCTTCCTCGCGCACGC GCCCATGGAGCCCATGAATGCGGTGGCCCAGATCACCGGTGATCAGGTGACCATCTGGACCGCCTCGCAATTCCCCTCCG CCGACGCCCCCGGCGCGGCGGCGGCGGCGGGCACCAGCGTCGACAAGGTGACCATCAACAGCCTCTGGGCGGGCGGCAGC TTCGGCCGCCGCGCGGTCGCCAATGCCGACTTCGTGGTGGAGGCCGTGGCCATCGCCAAGGCCCACGGCAAGGGCGTGCC GGTGAAGCTGGTGTGGACCCGCGAGGACGACATGAAGGCGGGCTACTACCGCCCCATGTATCTGCACCGGGTGAAGGCGG CGGTGGATGCCTCCGGCAAGCCGGTGGCGTGGAAGCACCATGTGGTCGGCCAGTCCATCCTCTCGGGCACCCTCTTCGAG AAGATGATGGTGGTGAACAATATCGACGCCACCTCCATCGAGGGCGCGGCGGGCATGGGCTACGCCATTCCCAACCTGCA TGTGGAGCTCACCAGCCCCAAGGTGGGGGTGCCGGTGCTGTGGTGGCGCTCGGTCGGCCACACCCACACCGCTTATGCGG TGGAGGTGATGATCGACCAGCTCGCCAAGGCCGCCGGCAAGGACCCGGTGGCGTTCCGGATGGAGATCCTGAAGGACCCG CGCCTCAAGGCGGTGCTGGCGCTGGCGGCCGAGAAGGCGCGCTGGGGCACCACGCTGGAGAAGGGCCGCTTCCGGGGCGT TGCCGCCCACAAGAGCTTCAACACCTATGTGGCCGAAGTGGCGGAGATCACGCTGCTGGAGAAGGGCTACCGGGTTGATC GCGTGGTGGCGGCGGTGGACTGCGGTTTCGTGGTCAATCCCGACGTGGTGCGGGCGCAGGTGGAAGGCGGCGTCGGCTTC GGCCTCGGCCATGTGATGCAGGACGCCATCACGCTGACCGACGGCCAGGTGGACCAGGCCAATTTCGATACCTACGAGCC GCTGCGCATGTCGCAGATGCCCAAGGTGGAGGTGCATATCGTGCCCTCCACCGAGAAGCCCACGGGCATCGGCGAGCCCG GCGTGCCGCCCATCGGGCCGGCGGTGGCCAACGCGCTGTTCGCGGCCACGGGCAAGCCGATGCTCAACCTGCCCTTCAAC CGGCAGACCATCGGTTCCTGA
Upstream 100 bases:
>100_bases CATCGACGCCGCCATGGACGGCAATGTCTGCCGCTGTGCCACCTACCAGCGCGTCCGCGCCGCCATCCACGACGCCGCCC GCCGGCTGGAGGCCTGAGCC
Downstream 100 bases:
>100_bases TCTTTCACCGACCAGACGATACGAAGGGGCGGAGTGATCCGCCCCTTCGTCATTTCAGCGGCCGGAAGCCCACATAGCCG CCGTCGGCGTCATAGAGATA
Product: twin-arginine translocation pathway signal precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MNAILKAAEAGLSRRAILRAMGGVGIGLVIGTDILPTGPAAAATDAAAASINPFVRIAPDGTITVVVKHLDLGQGTTTGF ATLVAEELDADLSKVKTEFAPLDPKVYGNAAFGGAQGTGGSTSMAASFDVYRRAGAAARAMLLAAGAKALNVPADAITIT SGTLMAGPKTATFGELAASAAREPVPQDPPLKKAANYALVGKEGTHRVDNLLKTTGTATYTQDVKLPGMLVAVVAHPPRF GAKALKVDDAAARAVKGVEAVVVVPQGVAVLAKTTYAAMKGRNALKVEWDEAKAEKRGTDALREEYRALLGKPGNVAETE GNVEDAFKAPGVKVVEADFEFPFLAHAPMEPMNAVAQITGDQVTIWTASQFPSADAPGAAAAAGTSVDKVTINSLWAGGS FGRRAVANADFVVEAVAIAKAHGKGVPVKLVWTREDDMKAGYYRPMYLHRVKAAVDASGKPVAWKHHVVGQSILSGTLFE KMMVVNNIDATSIEGAAGMGYAIPNLHVELTSPKVGVPVLWWRSVGHTHTAYAVEVMIDQLAKAAGKDPVAFRMEILKDP RLKAVLALAAEKARWGTTLEKGRFRGVAAHKSFNTYVAEVAEITLLEKGYRVDRVVAAVDCGFVVNPDVVRAQVEGGVGF GLGHVMQDAITLTDGQVDQANFDTYEPLRMSQMPKVEVHIVPSTEKPTGIGEPGVPPIGPAVANALFAATGKPMLNLPFN RQTIGS
Sequences:
>Translated_726_residues MNAILKAAEAGLSRRAILRAMGGVGIGLVIGTDILPTGPAAAATDAAAASINPFVRIAPDGTITVVVKHLDLGQGTTTGF ATLVAEELDADLSKVKTEFAPLDPKVYGNAAFGGAQGTGGSTSMAASFDVYRRAGAAARAMLLAAGAKALNVPADAITIT SGTLMAGPKTATFGELAASAAREPVPQDPPLKKAANYALVGKEGTHRVDNLLKTTGTATYTQDVKLPGMLVAVVAHPPRF GAKALKVDDAAARAVKGVEAVVVVPQGVAVLAKTTYAAMKGRNALKVEWDEAKAEKRGTDALREEYRALLGKPGNVAETE GNVEDAFKAPGVKVVEADFEFPFLAHAPMEPMNAVAQITGDQVTIWTASQFPSADAPGAAAAAGTSVDKVTINSLWAGGS FGRRAVANADFVVEAVAIAKAHGKGVPVKLVWTREDDMKAGYYRPMYLHRVKAAVDASGKPVAWKHHVVGQSILSGTLFE KMMVVNNIDATSIEGAAGMGYAIPNLHVELTSPKVGVPVLWWRSVGHTHTAYAVEVMIDQLAKAAGKDPVAFRMEILKDP RLKAVLALAAEKARWGTTLEKGRFRGVAAHKSFNTYVAEVAEITLLEKGYRVDRVVAAVDCGFVVNPDVVRAQVEGGVGF GLGHVMQDAITLTDGQVDQANFDTYEPLRMSQMPKVEVHIVPSTEKPTGIGEPGVPPIGPAVANALFAATGKPMLNLPFN RQTIGS >Mature_726_residues MNAILKAAEAGLSRRAILRAMGGVGIGLVIGTDILPTGPAAAATDAAAASINPFVRIAPDGTITVVVKHLDLGQGTTTGF ATLVAEELDADLSKVKTEFAPLDPKVYGNAAFGGAQGTGGSTSMAASFDVYRRAGAAARAMLLAAGAKALNVPADAITIT SGTLMAGPKTATFGELAASAAREPVPQDPPLKKAANYALVGKEGTHRVDNLLKTTGTATYTQDVKLPGMLVAVVAHPPRF GAKALKVDDAAARAVKGVEAVVVVPQGVAVLAKTTYAAMKGRNALKVEWDEAKAEKRGTDALREEYRALLGKPGNVAETE GNVEDAFKAPGVKVVEADFEFPFLAHAPMEPMNAVAQITGDQVTIWTASQFPSADAPGAAAAAGTSVDKVTINSLWAGGS FGRRAVANADFVVEAVAIAKAHGKGVPVKLVWTREDDMKAGYYRPMYLHRVKAAVDASGKPVAWKHHVVGQSILSGTLFE KMMVVNNIDATSIEGAAGMGYAIPNLHVELTSPKVGVPVLWWRSVGHTHTAYAVEVMIDQLAKAAGKDPVAFRMEILKDP RLKAVLALAAEKARWGTTLEKGRFRGVAAHKSFNTYVAEVAEITLLEKGYRVDRVVAAVDCGFVVNPDVVRAQVEGGVGF GLGHVMQDAITLTDGQVDQANFDTYEPLRMSQMPKVEVHIVPSTEKPTGIGEPGVPPIGPAVANALFAATGKPMLNLPFN RQTIGS
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=382, Percent_Identity=26.1780104712042, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 75818; Mature: 75818
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAILKAAEAGLSRRAILRAMGGVGIGLVIGTDILPTGPAAAATDAAAASINPFVRIAPD CCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHCCHHHHCCCCCEEECCC GTITVVVKHLDLGQGTTTGFATLVAEELDADLSKVKTEFAPLDPKVYGNAAFGGAQGTGG CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC STSMAASFDVYRRAGAAARAMLLAAGAKALNVPADAITITSGTLMAGPKTATFGELAASA CCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHH AREPVPQDPPLKKAANYALVGKEGTHRVDNLLKTTGTATYTQDVKLPGMLVAVVAHPPRF HCCCCCCCCCHHHHCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCC GAKALKVDDAAARAVKGVEAVVVVPQGVAVLAKTTYAAMKGRNALKVEWDEAKAEKRGTD CCEEEEECHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHCCCCEEEEEHHHHHHHHCCHH ALREEYRALLGKPGNVAETEGNVEDAFKAPGVKVVEADFEFPFLAHAPMEPMNAVAQITG HHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCEEECCCCCHHHHHHHCCC DQVTIWTASQFPSADAPGAAAAAGTSVDKVTINSLWAGGSFGRRAVANADFVVEAVAIAK CEEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCCHHHCCCHHHHHHHHHHH AHGKGVPVKLVWTREDDMKAGYYRPMYLHRVKAAVDASGKPVAWKHHVVGQSILSGTLFE HCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH KMMVVNNIDATSIEGAAGMGYAIPNLHVELTSPKVGVPVLWWRSVGHTHTAYAVEVMIDQ HHHHHCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHH LAKAAGKDPVAFRMEILKDPRLKAVLALAAEKARWGTTLEKGRFRGVAAHKSFNTYVAEV HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCHHHHHHHH AEITLLEKGYRVDRVVAAVDCGFVVNPDVVRAQVEGGVGFGLGHVMQDAITLTDGQVDQA HHHHHHHCCCCHHHEEEEECCCEEECCHHEEEEECCCCCCCHHHHHHHHEEECCCCCCCC NFDTYEPLRMSQMPKVEVHIVPSTEKPTGIGEPGVPPIGPAVANALFAATGKPMLNLPFN CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCC RQTIGS CCCCCC >Mature Secondary Structure MNAILKAAEAGLSRRAILRAMGGVGIGLVIGTDILPTGPAAAATDAAAASINPFVRIAPD CCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHCCHHHHCCCCCEEECCC GTITVVVKHLDLGQGTTTGFATLVAEELDADLSKVKTEFAPLDPKVYGNAAFGGAQGTGG CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC STSMAASFDVYRRAGAAARAMLLAAGAKALNVPADAITITSGTLMAGPKTATFGELAASA CCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCCHHHHHHHHH AREPVPQDPPLKKAANYALVGKEGTHRVDNLLKTTGTATYTQDVKLPGMLVAVVAHPPRF HCCCCCCCCCHHHHCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCC GAKALKVDDAAARAVKGVEAVVVVPQGVAVLAKTTYAAMKGRNALKVEWDEAKAEKRGTD CCEEEEECHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHCCCCEEEEEHHHHHHHHCCHH ALREEYRALLGKPGNVAETEGNVEDAFKAPGVKVVEADFEFPFLAHAPMEPMNAVAQITG HHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCEEECCCCCHHHHHHHCCC DQVTIWTASQFPSADAPGAAAAAGTSVDKVTINSLWAGGSFGRRAVANADFVVEAVAIAK CEEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEEEECCCCCCCHHHCCCHHHHHHHHHHH AHGKGVPVKLVWTREDDMKAGYYRPMYLHRVKAAVDASGKPVAWKHHVVGQSILSGTLFE HCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH KMMVVNNIDATSIEGAAGMGYAIPNLHVELTSPKVGVPVLWWRSVGHTHTAYAVEVMIDQ HHHHHCCCCCCCCCCCCCCCEECCCEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHH LAKAAGKDPVAFRMEILKDPRLKAVLALAAEKARWGTTLEKGRFRGVAAHKSFNTYVAEV HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCHHHHHHHH AEITLLEKGYRVDRVVAAVDCGFVVNPDVVRAQVEGGVGFGLGHVMQDAITLTDGQVDQA HHHHHHHCCCCHHHEEEEECCCEEECCHHEEEEECCCCCCCHHHHHHHHEEECCCCCCCC NFDTYEPLRMSQMPKVEVHIVPSTEKPTGIGEPGVPPIGPAVANALFAATGKPMLNLPFN CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCC RQTIGS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]