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The map label for this gene is yfdR [C]

Identifier: 158422021

GI number: 158422021

Start: 451484

End: 452131

Strand: Reverse

Name: yfdR [C]

Synonym: AZC_0397

Alternate gene names: 158422021

Gene position: 452131-451484 (Counterclockwise)

Preceding gene: 158422027

Following gene: 158422020

Centisome position: 8.42

GC content: 69.6

Gene sequence:

>648_bases
ATGACGGATTCGCCCGCACAACCGAGCCTGCCCCCCACCCCGCCTTCCCCGACCGCCGGCAAGAAGCCGCGCGCCTGGCA
GAGGATGCTCTCGGGCCGCCGCCTGGACCTGCTGGACCCCTCGGCCCTCGACATCGAGATCGAGGACATCGCCCATGGCC
TGGCCCGCGTCGCCCGCTGGAACGGCCAGACGAGCGGCGATGACATCTTCTCGGTGGCCCAGCATTCGCTGCTGGTGGAA
CGGCTCGCCCGCGCGCAGACGCATGACCTTGACCGGAGCTGGCGCCTCGCCGTGCTGCTGCACGATGCCCCGGAATATGT
GATCGGCGACATGATCTCGCCCTTCAAGGCGATGATCGGCGGCGACTACAAGGCGGTGGAGGCCCGGCTTCTCGCCGCCA
TCAGCCAGCGCTTCGGCCTGCCGGTGCGATGGCCGCAGGCGCTGGTGAAACTCACCAAGGCGGCCGACCGCGCCGCCGCT
TTTCTGGAGGCCACCCGGCTCGCCGGCTTCTCCGAAGGGGAGGCGGTGAAGGTGTTCGGCCGTCCGCCCCGGCTCGACGC
CAGCCTCGAAGCCGCCTATCTCTCTCCATGGCGCGCACAGGAGGCCAAGGAACGCTTCCTGGCGCGGTTCGAGGATATCG
CCCGATGA

Upstream 100 bases:

>100_bases
GGCGGCCTTTCGCGTAGAGCGCCGCGAAACTAGCAGGCTTCTCTCCGCCGCACAGCGCCCCGGCTTCCGCCGCCCCACGG
ACCGCGCTAAGCCTCAGGGA

Downstream 100 bases:

>100_bases
TCTATGTCTGCTCCCTCTCGCGCCTCCACGAGACGGTGGAGCGCACCGGCGCCCGGCACGTCATCACCCTCATCAATGGC
GGCACCGCCGTGACGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTDSPAQPSLPPTPPSPTAGKKPRAWQRMLSGRRLDLLDPSALDIEIEDIAHGLARVARWNGQTSGDDIFSVAQHSLLVE
RLARAQTHDLDRSWRLAVLLHDAPEYVIGDMISPFKAMIGGDYKAVEARLLAAISQRFGLPVRWPQALVKLTKAADRAAA
FLEATRLAGFSEGEAVKVFGRPPRLDASLEAAYLSPWRAQEAKERFLARFEDIAR

Sequences:

>Translated_215_residues
MTDSPAQPSLPPTPPSPTAGKKPRAWQRMLSGRRLDLLDPSALDIEIEDIAHGLARVARWNGQTSGDDIFSVAQHSLLVE
RLARAQTHDLDRSWRLAVLLHDAPEYVIGDMISPFKAMIGGDYKAVEARLLAAISQRFGLPVRWPQALVKLTKAADRAAA
FLEATRLAGFSEGEAVKVFGRPPRLDASLEAAYLSPWRAQEAKERFLARFEDIAR
>Mature_214_residues
TDSPAQPSLPPTPPSPTAGKKPRAWQRMLSGRRLDLLDPSALDIEIEDIAHGLARVARWNGQTSGDDIFSVAQHSLLVER
LARAQTHDLDRSWRLAVLLHDAPEYVIGDMISPFKAMIGGDYKAVEARLLAAISQRFGLPVRWPQALVKLTKAADRAAAF
LEATRLAGFSEGEAVKVFGRPPRLDASLEAAYLSPWRAQEAKERFLARFEDIAR

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23759; Mature: 23628

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSPAQPSLPPTPPSPTAGKKPRAWQRMLSGRRLDLLDPSALDIEIEDIAHGLARVARW
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
NGQTSGDDIFSVAQHSLLVERLARAQTHDLDRSWRLAVLLHDAPEYVIGDMISPFKAMIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHC
GDYKAVEARLLAAISQRFGLPVRWPQALVKLTKAADRAAAFLEATRLAGFSEGEAVKVFG
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
RPPRLDASLEAAYLSPWRAQEAKERFLARFEDIAR
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDSPAQPSLPPTPPSPTAGKKPRAWQRMLSGRRLDLLDPSALDIEIEDIAHGLARVARW
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
NGQTSGDDIFSVAQHSLLVERLARAQTHDLDRSWRLAVLLHDAPEYVIGDMISPFKAMIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHC
GDYKAVEARLLAAISQRFGLPVRWPQALVKLTKAADRAAAFLEATRLAGFSEGEAVKVFG
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
RPPRLDASLEAAYLSPWRAQEAKERFLARFEDIAR
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]