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The map label for this gene is 158422013

Identifier: 158422013

GI number: 158422013

Start: 442524

End: 443426

Strand: Reverse

Name: 158422013

Synonym: AZC_0389

Alternate gene names: NA

Gene position: 443426-442524 (Counterclockwise)

Preceding gene: 158422014

Following gene: 158422011

Centisome position: 8.26

GC content: 71.87

Gene sequence:

>903_bases
ATGCCGCAGCCTGACGGCGCGACGGCGATTTTCGAGGCGCAGCGGCCCCGGCTGCTGCGCCTCGCCTATCGCATGCTCGG
CTCGCTCAGCGAGGCCGAGGATGTGGTGCAGGACGCCTGGCTGCGCTGGCAGCGGGCGGACCATTCCGCCATTGCAGCGC
CGCCCGCCTTCCTGTCCCGCGTGGTCACGCGGCTGTGCCTCGACGTCATGAAATCGGCCCGCCGCACGCGGGAAACCTAC
GTTGGCCCGTGGCTGCCGGAGCCCCTGGTGGATGGCCTGTCGCTGCCCGAACCTGTGCCCGATGCGGATGATCTCACCCT
GACGCTCATGCTGGCGCTGGAGCGGCTCTCGCCGCTGGAACGCGCCGCCTTCCTGCTGCACGACGTGTTCGGCGTGCCGC
TGAACGAGGTGGCCGCCACCCTTGAACGCGAGCCCACCGCGGTGCGCCAGCTGGCCGCCCGCGCGCGGGGCCATGTGCGG
GAGGCGCGGCCGCGCTACAAGGTGGAGGAAGAGGAAGGCGCGCGCATCGCGCAGGCCTTCTTCACCGCCAGCCGCAGCGG
CGACGTCACGGCCCTGGGGAGCCTGCTGGCGGAGACGGCCACCCTGCGCTCGGACGGTGGCGGCAAGGTGCTGGCGTTCC
GCAATCCCATCATCGGGTCTGCGCGCATCCTGCGCCTCTATGCCCGCCTCGCGGTGAAGGACACCGATCACGGCGCCCTG
CTGCGTCCGCTGGTCATCGACGGGCTGCCGGGCTTCCTCAGCCGCGAGCGGGGCGGCCTGATGCAGACCACCGCCTTCGC
CATTGCGGACGGGCGCATCACGGACATCTTCATCACCCGCAATCCGGACAAGCTCGCCCGGCTGCTCTCGGCCCTTGGCG
AAGCGCCGGCGGCGGGGGCCTGA

Upstream 100 bases:

>100_bases
GAGGAGGAACGGGTGCAGCTCACCTTGCTCATCGGCGCCATCAACACCTGGAACCGCCTTCAGGTGGGCTTCCGCGTGGC
GCCTGCGCTCGAGACCGCGC

Downstream 100 bases:

>100_bases
ATCCTACTGGCTCGCCCAGATGATGCGGGCGATCCAGAGCACGTCGGTGGCGGCCAGCGTGCGGCCCTCATATTCCGGAT
TGAGGGAGCGCAGTTCCACG

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase Sigma Factor SigJ; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; Sigma Factor Sigma; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MPQPDGATAIFEAQRPRLLRLAYRMLGSLSEAEDVVQDAWLRWQRADHSAIAAPPAFLSRVVTRLCLDVMKSARRTRETY
VGPWLPEPLVDGLSLPEPVPDADDLTLTLMLALERLSPLERAAFLLHDVFGVPLNEVAATLEREPTAVRQLAARARGHVR
EARPRYKVEEEEGARIAQAFFTASRSGDVTALGSLLAETATLRSDGGGKVLAFRNPIIGSARILRLYARLAVKDTDHGAL
LRPLVIDGLPGFLSRERGGLMQTTAFAIADGRITDIFITRNPDKLARLLSALGEAPAAGA

Sequences:

>Translated_300_residues
MPQPDGATAIFEAQRPRLLRLAYRMLGSLSEAEDVVQDAWLRWQRADHSAIAAPPAFLSRVVTRLCLDVMKSARRTRETY
VGPWLPEPLVDGLSLPEPVPDADDLTLTLMLALERLSPLERAAFLLHDVFGVPLNEVAATLEREPTAVRQLAARARGHVR
EARPRYKVEEEEGARIAQAFFTASRSGDVTALGSLLAETATLRSDGGGKVLAFRNPIIGSARILRLYARLAVKDTDHGAL
LRPLVIDGLPGFLSRERGGLMQTTAFAIADGRITDIFITRNPDKLARLLSALGEAPAAGA
>Mature_299_residues
PQPDGATAIFEAQRPRLLRLAYRMLGSLSEAEDVVQDAWLRWQRADHSAIAAPPAFLSRVVTRLCLDVMKSARRTRETYV
GPWLPEPLVDGLSLPEPVPDADDLTLTLMLALERLSPLERAAFLLHDVFGVPLNEVAATLEREPTAVRQLAARARGHVRE
ARPRYKVEEEEGARIAQAFFTASRSGDVTALGSLLAETATLRSDGGGKVLAFRNPIIGSARILRLYARLAVKDTDHGALL
RPLVIDGLPGFLSRERGGLMQTTAFAIADGRITDIFITRNPDKLARLLSALGEAPAAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32669; Mature: 32538

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPDGATAIFEAQRPRLLRLAYRMLGSLSEAEDVVQDAWLRWQRADHSAIAAPPAFLSR
CCCCCCCEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VVTRLCLDVMKSARRTRETYVGPWLPEPLVDGLSLPEPVPDADDLTLTLMLALERLSPLE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHH
RAAFLLHDVFGVPLNEVAATLEREPTAVRQLAARARGHVREARPRYKVEEEEGARIAQAF
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FTASRSGDVTALGSLLAETATLRSDGGGKVLAFRNPIIGSARILRLYARLAVKDTDHGAL
HHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHH
LRPLVIDGLPGFLSRERGGLMQTTAFAIADGRITDIFITRNPDKLARLLSALGEAPAAGA
HHHHHHCCCCHHHHHHCCCCHHHHHHHEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PQPDGATAIFEAQRPRLLRLAYRMLGSLSEAEDVVQDAWLRWQRADHSAIAAPPAFLSR
CCCCCCEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VVTRLCLDVMKSARRTRETYVGPWLPEPLVDGLSLPEPVPDADDLTLTLMLALERLSPLE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHH
RAAFLLHDVFGVPLNEVAATLEREPTAVRQLAARARGHVREARPRYKVEEEEGARIAQAF
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FTASRSGDVTALGSLLAETATLRSDGGGKVLAFRNPIIGSARILRLYARLAVKDTDHGAL
HHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHH
LRPLVIDGLPGFLSRERGGLMQTTAFAIADGRITDIFITRNPDKLARLLSALGEAPAAGA
HHHHHHCCCCHHHHHHCCCCHHHHHHHEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA