| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158421974
Identifier: 158421974
GI number: 158421974
Start: 404253
End: 405335
Strand: Reverse
Name: 158421974
Synonym: AZC_0350
Alternate gene names: NA
Gene position: 405335-404253 (Counterclockwise)
Preceding gene: 158421975
Following gene: 158421973
Centisome position: 7.55
GC content: 69.25
Gene sequence:
>1083_bases GTGCGCTCAGCGTTCCGGCCTCTCCGAGAGAACGTGCCGATCGAACCGGTTTTCGCGCCGATCGGACGCACGGTCTCGTC AAAATCTCAGGGACCGCCTCACCGATCAGGTCCGCCCGGCCGGATCGGCGCAGCCTCCCGCGTGAAGGAACCGATTATGG ACGCGCTCTCTCCCGCCCCCGCCCTTCTCGGCATCGGCTATTCGATCCGCGCCACCTCACCGGAGTTCGAGGACCTGCCC GCCAAGCTCGACGAGGCCGAGCGACTCGGCGTCGATTTCGTGGAGCTGCCCACCTTCGCCTGGACGTTGGTGGTGAACGG CCGCATCCTCGACGACCGGCTGAAGCGCCTCGTCGCCGCCACCCGTGACCGGCCCTTCGGCTACACGGTGCACGGCCCGC TCGCCATCAACCTCATGGACGTGCCGGCCCGCCTGCCGCGCCACGAGGCGCTGCTGGCCGCTTCCATCGAGATCGCCGGA GCGCTGGGCGCCGAGAATTACGTGATGCACACCGGCTGCGTGCGCGAGCAGGACGACGACATCGAGGTCGCCTACAAACG CCAGCGCGACGCCCTCGCCCTGGCCGGCGACCTGGCCGCCCGCCATGACCTCACGGTTTGCGTGGAGAACGTCTTCCGCT TCGAGAAGATGCGCGAGACGGCTCTGCCCTCGCGCCTTGCCGCAGAGCTGGACGCGCTCGATCACGCCCATGTGCGGGCG ACCCTCGATGTCAGCCACGCCTATCAGCGCTGCACCGAGGCCAAGGTGCCGCTGCTGCCGGAACTCGCTGCCCTCGCTCC GTTCGCCAAGCATGTGCATGTCCATGACAGCTTCGGCCGCGCCATGGAGAGCTGGAGCGTGGATGAAGCCGAGCGCCTCG GTCTCGGCGAAGGCGACCTCCACCTGCCGGTGGGCTGGGGCGACCTGCCGTGGGAGACCATCGCCGCCCAGTGCCGGCTT GCTCCCCGCGCCATCCTGAACCTCGAACTGCACCGCCGCTACTGGAGCGAGCTGCCCAGCCAGATCCCGGTGATGCGCCA GCTTGCCGACGCCTTCGCGACGGCAGCCGCCACCGCCGCCTGA
Upstream 100 bases:
>100_bases ATGCCACTGCCATGGAATGACCGTCTGATAGGCAGGGCAAGATTCGGGCAGGCCCTCCGCGAACGGCTGTGCTAAAGCAA CCGGGCCGCAAGGCTCTGGT
Downstream 100 bases:
>100_bases GCCGCGCTCGCGGCGCTCGGGCCGGTCTTCCATGCGATCGCCCCGAGATTTGACGGGTAAGCGGTAATTGAATGCTTCCG GTCCGCCGGATGGCACTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein TIM Barrel; Myo-Inositol Catabolism Protein; Xylose Isomerase-Like TIM Barrel
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MRSAFRPLRENVPIEPVFAPIGRTVSSKSQGPPHRSGPPGRIGAASRVKEPIMDALSPAPALLGIGYSIRATSPEFEDLP AKLDEAERLGVDFVELPTFAWTLVVNGRILDDRLKRLVAATRDRPFGYTVHGPLAINLMDVPARLPRHEALLAASIEIAG ALGAENYVMHTGCVREQDDDIEVAYKRQRDALALAGDLAARHDLTVCVENVFRFEKMRETALPSRLAAELDALDHAHVRA TLDVSHAYQRCTEAKVPLLPELAALAPFAKHVHVHDSFGRAMESWSVDEAERLGLGEGDLHLPVGWGDLPWETIAAQCRL APRAILNLELHRRYWSELPSQIPVMRQLADAFATAAATAA
Sequences:
>Translated_360_residues MRSAFRPLRENVPIEPVFAPIGRTVSSKSQGPPHRSGPPGRIGAASRVKEPIMDALSPAPALLGIGYSIRATSPEFEDLP AKLDEAERLGVDFVELPTFAWTLVVNGRILDDRLKRLVAATRDRPFGYTVHGPLAINLMDVPARLPRHEALLAASIEIAG ALGAENYVMHTGCVREQDDDIEVAYKRQRDALALAGDLAARHDLTVCVENVFRFEKMRETALPSRLAAELDALDHAHVRA TLDVSHAYQRCTEAKVPLLPELAALAPFAKHVHVHDSFGRAMESWSVDEAERLGLGEGDLHLPVGWGDLPWETIAAQCRL APRAILNLELHRRYWSELPSQIPVMRQLADAFATAAATAA >Mature_360_residues MRSAFRPLRENVPIEPVFAPIGRTVSSKSQGPPHRSGPPGRIGAASRVKEPIMDALSPAPALLGIGYSIRATSPEFEDLP AKLDEAERLGVDFVELPTFAWTLVVNGRILDDRLKRLVAATRDRPFGYTVHGPLAINLMDVPARLPRHEALLAASIEIAG ALGAENYVMHTGCVREQDDDIEVAYKRQRDALALAGDLAARHDLTVCVENVFRFEKMRETALPSRLAAELDALDHAHVRA TLDVSHAYQRCTEAKVPLLPELAALAPFAKHVHVHDSFGRAMESWSVDEAERLGLGEGDLHLPVGWGDLPWETIAAQCRL APRAILNLELHRRYWSELPSQIPVMRQLADAFATAAATAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39454; Mature: 39454
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAFRPLRENVPIEPVFAPIGRTVSSKSQGPPHRSGPPGRIGAASRVKEPIMDALSPAP CCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC ALLGIGYSIRATSPEFEDLPAKLDEAERLGVDFVELPTFAWTLVVNGRILDDRLKRLVAA HHHCCCEEEEECCCCHHHHCHHHHHHHHCCCCHHHHCCEEEEEEECCEEHHHHHHHHHHH TRDRPFGYTVHGPLAINLMDVPARLPRHEALLAASIEIAGALGAENYVMHTGCVREQDDD HCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC IEVAYKRQRDALALAGDLAARHDLTVCVENVFRFEKMRETALPSRLAAELDALDHAHVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHEEE TLDVSHAYQRCTEAKVPLLPELAALAPFAKHVHVHDSFGRAMESWSVDEAERLGLGEGDL EEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEHHHHHHHHHHCCCCHHHHCCCCCCCE HLPVGWGDLPWETIAAQCRLAPRAILNLELHRRYWSELPSQIPVMRQLADAFATAAATAA EEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSAFRPLRENVPIEPVFAPIGRTVSSKSQGPPHRSGPPGRIGAASRVKEPIMDALSPAP CCCHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC ALLGIGYSIRATSPEFEDLPAKLDEAERLGVDFVELPTFAWTLVVNGRILDDRLKRLVAA HHHCCCEEEEECCCCHHHHCHHHHHHHHCCCCHHHHCCEEEEEEECCEEHHHHHHHHHHH TRDRPFGYTVHGPLAINLMDVPARLPRHEALLAASIEIAGALGAENYVMHTGCVREQDDD HCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC IEVAYKRQRDALALAGDLAARHDLTVCVENVFRFEKMRETALPSRLAAELDALDHAHVRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHEEE TLDVSHAYQRCTEAKVPLLPELAALAPFAKHVHVHDSFGRAMESWSVDEAERLGLGEGDL EEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEHHHHHHHHHHCCCCHHHHCCCCCCCE HLPVGWGDLPWETIAAQCRLAPRAILNLELHRRYWSELPSQIPVMRQLADAFATAAATAA EEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA