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The map label for this gene is 158421899

Identifier: 158421899

GI number: 158421899

Start: 319793

End: 320269

Strand: Reverse

Name: 158421899

Synonym: AZC_0275

Alternate gene names: NA

Gene position: 320269-319793 (Counterclockwise)

Preceding gene: 158421900

Following gene: 158421898

Centisome position: 5.96

GC content: 61.84

Gene sequence:

>477_bases
ATGGCTATCTATGTGAACTACGACGGCATCCAGGGCGAGGCCACGCAGCAGGACCACAAGAAGTGGATCGACGTTCTCTC
GCTCTCCTGGGGCGTGGGGCGCGGCATCTCGACGGTCGCCGGCTCGGGCAACAACCGCGAGGCCTCCGAGCCGTCCGTGA
GTGAAGTCTCGATCGTGAAGGCCTTCGACGCCGCCTCTCCCAAGCTCTTCACCGAATCCTGCACCGGCAATGTCGGCAAG
ACGGTGAAGATCGACCTCGTGAGCACAGGCAACCCCGGCGTCACCTACTGCACCTATACGCTGACCAACGCGCTGATCTC
GTCCTATTCGGTCTCCACCGGCGGCGATCGCCCGACGGAGTCCGTCTCCATCAGCTTCACGAAGCTCGAATTCAAGTTCA
CGCCCTATGACGACAAAAACAAGGCCGGTACCCCGGTGACGGTGTCCTACGACCTCGCGACCACCAAGAGCTCGTGA

Upstream 100 bases:

>100_bases
AAAGACGATCACACGGCCGCCACAAACAAGTACACGGAACGCCAAATACAGACCCTACCACTCTACCCGGTTCGAAACCG
AGAAAGTCTAGGGGATCATC

Downstream 100 bases:

>100_bases
TACGCATAAAGCCGAGCTTATGATCTTACCGTGCGCCGCCCGGCGCGCGGTCGTCATCTGACACGTTAAGCGGCAGCCGC
CCACGCCGGAGGTTTGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Hcp1 Family Type VI Secretion System Effector; Hemolysin-Coregulated Protein; Histidine Kinase; Type VI Secretion System Protein; Cytoplasmic Protein SciK; Type VI Secretion System Protein EvpC

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAIYVNYDGIQGEATQQDHKKWIDVLSLSWGVGRGISTVAGSGNNREASEPSVSEVSIVKAFDAASPKLFTESCTGNVGK
TVKIDLVSTGNPGVTYCTYTLTNALISSYSVSTGGDRPTESVSISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS

Sequences:

>Translated_158_residues
MAIYVNYDGIQGEATQQDHKKWIDVLSLSWGVGRGISTVAGSGNNREASEPSVSEVSIVKAFDAASPKLFTESCTGNVGK
TVKIDLVSTGNPGVTYCTYTLTNALISSYSVSTGGDRPTESVSISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS
>Mature_157_residues
AIYVNYDGIQGEATQQDHKKWIDVLSLSWGVGRGISTVAGSGNNREASEPSVSEVSIVKAFDAASPKLFTESCTGNVGKT
VKIDLVSTGNPGVTYCTYTLTNALISSYSVSTGGDRPTESVSISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16783; Mature: 16652

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIYVNYDGIQGEATQQDHKKWIDVLSLSWGVGRGISTVAGSGNNREASEPSVSEVSIVK
CEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEE
AFDAASPKLFTESCTGNVGKTVKIDLVSTGNPGVTYCTYTLTNALISSYSVSTGGDRPTE
ECCCCCCCEEECCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC
SVSISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS
EEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure 
AIYVNYDGIQGEATQQDHKKWIDVLSLSWGVGRGISTVAGSGNNREASEPSVSEVSIVK
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEE
AFDAASPKLFTESCTGNVGKTVKIDLVSTGNPGVTYCTYTLTNALISSYSVSTGGDRPTE
ECCCCCCCEEECCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC
SVSISFTKLEFKFTPYDDKNKAGTPVTVSYDLATTKSS
EEEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA