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The map label for this gene is glcD [H]

Identifier: 158421877

GI number: 158421877

Start: 293823

End: 295274

Strand: Direct

Name: glcD [H]

Synonym: AZC_0253

Alternate gene names: 158421877

Gene position: 293823-295274 (Clockwise)

Preceding gene: 158421875

Following gene: 158421878

Centisome position: 5.47

GC content: 66.87

Gene sequence:

>1452_bases
GTGCCGGCTTGCTATGAAGCCTCCAGATGCGCGGAGGCAGGCATGGACAGGATCGACACCGTTCTCAAGGCTGTGCCGGA
GGACCTCGTCACCACCGATCAGGACGTGGTGGCGCGCTATCTCACGGACTTCCGCAAATACATGACCGGCGCCTCCCGCG
CCGTGCTGCGCCCCCGGACCACCGAAGACGTGCGCCGCATCGTGGCGCTGTGCGCGGAGCATGGCGTGCCGCTGGTGCCC
CAGGGCGGCAACACCTCCTATTGCGCCGCCGCCACCCCGGGCGTTGCGGGCGACGAACTGGTGCTGAGCCTGGAGCGGCT
GAACGCCATCCGCGAGGTGGATGCCCCCAACCTCTCCCTCACCGCCGAAGCTGGCTGCGTGCTGAGCGTGCTTCAGGAGA
CGGCGGATGCGGCGGGCCTCATGCTGCCGCTGGACCTCGGTTCGCGCCAGTCCTGCCAGATCGGCGGCAATCTCTCCACC
AATGCCGGCGGCGTCTCCGTGCTGAAGTACGGCATGGCCCGCGATCTCGTGCTGGGCCTCGAGGCGGTGCTGCCGGACGG
GCAGCTGCTCGACGTGCTCCAGCCCCTGCGCAAGAACAACACCGGCTATGATGTGAAGCAGCTTCTGCTGGGCGCGGAAG
GCACGCTCGGCATCATCACGGCGGTGTCGCTGAAGCTGGTGCGCAAGAGCGTGCAGACTGTCACGGCCTTCCTCGCCATT
CCGGAGATCGACGCCCTGACGCAGATCCTGGCGCGGGCGCAGGCCTATACCGGCGAGTGCATCACCTCGTTCGAATATGT
CTCCGACCATTCCCTCCGGATGCTGCTGGCCGCCAGGAGCGAGCTGCGCCATCCGCTGACGGCGCCCAACCCCCATTATG
TGCTGCTGGAAGCCCAGACCGCCTCGCCCGTCTTCCCGCTGGAGGACGCGGTGAGCCAGTTGCTGGAGCAACTGATGGAA
GAGGGGCTCGTCACCGACGGCACGCTCGCCTCCGGCGGCGCGCAGCGCGATGCGCTCTGGGTGCTGCGCGAGCACATTCC
CGAGGCGGAAGTGGCGAACGGCGGCTCGGTAAAGCACGATGTCTCCGTCACCACCTCCCGCCTGCCGGCCTTCGTGAAAG
AGGCCTCCGCGCTGGTGGAGGACCATTCGGAGGGCGGCCGCCTGTCCATCTATGGTCACGTGGGCGATGGCAATGTGCAC
TTCAACGTGGTTGCGCCCGTGGGTGCCGTGCCGGCCACCTACAAGGCATGGTTCGAGCGCGAGGTCTCGCCCCGCATCTA
TGATCTGGCCGTGGCCATGGGCGGATCGTTTGGTGCCGAATACGGGATCGGCCGGGTGAAACTCGATCTGCTGGACCGCT
ACGGCAATCCTGCCAAGATCGCCCTCATGCGGGCCATCAAGACAGCGGTGGACCCGAAGAACATCCTCAATCCGGGGAAG
GTGGTGCGTTAG

Upstream 100 bases:

>100_bases
CTGAGGCAGGAAAGGGCGGGCGGCTGCGGAAGGCAATCCCTGCCGGTGGGCGAGCCGGCATAAAGTTGCGCGGGACCTGG
CTGATGCCGCACCATTCTTC

Downstream 100 bases:

>100_bases
CCCATCCGCCGGATGAGCGCGCCCACGTGGTGCGGTGGCGGAGCGACATCGCTTGTTGCAGCCATCTGCCGCCTGCGGCC
AACCCCCGCACCCCTACTTT

Product: FAD/FMN-containing dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MPACYEASRCAEAGMDRIDTVLKAVPEDLVTTDQDVVARYLTDFRKYMTGASRAVLRPRTTEDVRRIVALCAEHGVPLVP
QGGNTSYCAAATPGVAGDELVLSLERLNAIREVDAPNLSLTAEAGCVLSVLQETADAAGLMLPLDLGSRQSCQIGGNLST
NAGGVSVLKYGMARDLVLGLEAVLPDGQLLDVLQPLRKNNTGYDVKQLLLGAEGTLGIITAVSLKLVRKSVQTVTAFLAI
PEIDALTQILARAQAYTGECITSFEYVSDHSLRMLLAARSELRHPLTAPNPHYVLLEAQTASPVFPLEDAVSQLLEQLME
EGLVTDGTLASGGAQRDALWVLREHIPEAEVANGGSVKHDVSVTTSRLPAFVKEASALVEDHSEGGRLSIYGHVGDGNVH
FNVVAPVGAVPATYKAWFEREVSPRIYDLAVAMGGSFGAEYGIGRVKLDLLDRYGNPAKIALMRAIKTAVDPKNILNPGK
VVR

Sequences:

>Translated_483_residues
MPACYEASRCAEAGMDRIDTVLKAVPEDLVTTDQDVVARYLTDFRKYMTGASRAVLRPRTTEDVRRIVALCAEHGVPLVP
QGGNTSYCAAATPGVAGDELVLSLERLNAIREVDAPNLSLTAEAGCVLSVLQETADAAGLMLPLDLGSRQSCQIGGNLST
NAGGVSVLKYGMARDLVLGLEAVLPDGQLLDVLQPLRKNNTGYDVKQLLLGAEGTLGIITAVSLKLVRKSVQTVTAFLAI
PEIDALTQILARAQAYTGECITSFEYVSDHSLRMLLAARSELRHPLTAPNPHYVLLEAQTASPVFPLEDAVSQLLEQLME
EGLVTDGTLASGGAQRDALWVLREHIPEAEVANGGSVKHDVSVTTSRLPAFVKEASALVEDHSEGGRLSIYGHVGDGNVH
FNVVAPVGAVPATYKAWFEREVSPRIYDLAVAMGGSFGAEYGIGRVKLDLLDRYGNPAKIALMRAIKTAVDPKNILNPGK
VVR
>Mature_482_residues
PACYEASRCAEAGMDRIDTVLKAVPEDLVTTDQDVVARYLTDFRKYMTGASRAVLRPRTTEDVRRIVALCAEHGVPLVPQ
GGNTSYCAAATPGVAGDELVLSLERLNAIREVDAPNLSLTAEAGCVLSVLQETADAAGLMLPLDLGSRQSCQIGGNLSTN
AGGVSVLKYGMARDLVLGLEAVLPDGQLLDVLQPLRKNNTGYDVKQLLLGAEGTLGIITAVSLKLVRKSVQTVTAFLAIP
EIDALTQILARAQAYTGECITSFEYVSDHSLRMLLAARSELRHPLTAPNPHYVLLEAQTASPVFPLEDAVSQLLEQLMEE
GLVTDGTLASGGAQRDALWVLREHIPEAEVANGGSVKHDVSVTTSRLPAFVKEASALVEDHSEGGRLSIYGHVGDGNVHF
NVVAPVGAVPATYKAWFEREVSPRIYDLAVAMGGSFGAEYGIGRVKLDLLDRYGNPAKIALMRAIKTAVDPKNILNPGKV
VR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=453, Percent_Identity=37.9690949227373, Blast_Score=290, Evalue=3e-78,
Organism=Homo sapiens, GI37595756, Length=441, Percent_Identity=31.7460317460317, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI37595754, Length=464, Percent_Identity=30.3879310344828, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI4501993, Length=174, Percent_Identity=31.6091954022989, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI1789351, Length=462, Percent_Identity=26.4069264069264, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI48994907, Length=223, Percent_Identity=30.9417040358744, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17534361, Length=456, Percent_Identity=33.7719298245614, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI71992381, Length=467, Percent_Identity=26.1241970021413, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71992373, Length=470, Percent_Identity=25.9574468085106, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71992392, Length=359, Percent_Identity=27.2980501392758, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17556096, Length=174, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6320023, Length=466, Percent_Identity=36.0515021459227, Blast_Score=297, Evalue=3e-81,
Organism=Saccharomyces cerevisiae, GI6320764, Length=472, Percent_Identity=33.4745762711864, Blast_Score=268, Evalue=1e-72,
Organism=Saccharomyces cerevisiae, GI6320027, Length=487, Percent_Identity=27.9260780287474, Blast_Score=157, Evalue=4e-39,
Organism=Drosophila melanogaster, GI18921117, Length=447, Percent_Identity=35.5704697986577, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24639277, Length=447, Percent_Identity=35.5704697986577, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24639275, Length=447, Percent_Identity=35.5704697986577, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24653753, Length=197, Percent_Identity=30.9644670050761, Blast_Score=82, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51530; Mature: 51398

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPACYEASRCAEAGMDRIDTVLKAVPEDLVTTDQDVVARYLTDFRKYMTGASRAVLRPRT
CCCCCCHHHHHHHCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHEECCCC
TEDVRRIVALCAEHGVPLVPQGGNTSYCAAATPGVAGDELVLSLERLNAIREVDAPNLSL
HHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
TAEAGCVLSVLQETADAAGLMLPLDLGSRQSCQIGGNLSTNAGGVSVLKYGMARDLVLGL
ECCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH
EAVLPDGQLLDVLQPLRKNNTGYDVKQLLLGAEGTLGIITAVSLKLVRKSVQTVTAFLAI
HHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PEIDALTQILARAQAYTGECITSFEYVSDHSLRMLLAARSELRHPLTAPNPHYVLLEAQT
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
ASPVFPLEDAVSQLLEQLMEEGLVTDGTLASGGAQRDALWVLREHIPEAEVANGGSVKHD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEE
VSVTTSRLPAFVKEASALVEDHSEGGRLSIYGHVGDGNVHFNVVAPVGAVPATYKAWFER
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHH
EVSPRIYDLAVAMGGSFGAEYGIGRVKLDLLDRYGNPAKIALMRAIKTAVDPKNILNPGK
CCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCC
VVR
CCC
>Mature Secondary Structure 
PACYEASRCAEAGMDRIDTVLKAVPEDLVTTDQDVVARYLTDFRKYMTGASRAVLRPRT
CCCCCHHHHHHHCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHEECCCC
TEDVRRIVALCAEHGVPLVPQGGNTSYCAAATPGVAGDELVLSLERLNAIREVDAPNLSL
HHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
TAEAGCVLSVLQETADAAGLMLPLDLGSRQSCQIGGNLSTNAGGVSVLKYGMARDLVLGL
ECCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH
EAVLPDGQLLDVLQPLRKNNTGYDVKQLLLGAEGTLGIITAVSLKLVRKSVQTVTAFLAI
HHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PEIDALTQILARAQAYTGECITSFEYVSDHSLRMLLAARSELRHPLTAPNPHYVLLEAQT
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
ASPVFPLEDAVSQLLEQLMEEGLVTDGTLASGGAQRDALWVLREHIPEAEVANGGSVKHD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEE
VSVTTSRLPAFVKEASALVEDHSEGGRLSIYGHVGDGNVHFNVVAPVGAVPATYKAWFER
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHH
EVSPRIYDLAVAMGGSFGAEYGIGRVKLDLLDRYGNPAKIALMRAIKTAVDPKNILNPGK
CCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCC
VVR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]