| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421869
Identifier: 158421869
GI number: 158421869
Start: 288138
End: 288725
Strand: Direct
Name: 158421869
Synonym: AZC_0245
Alternate gene names: NA
Gene position: 288138-288725 (Clockwise)
Preceding gene: 158421866
Following gene: 158421870
Centisome position: 5.37
GC content: 67.86
Gene sequence:
>588_bases TTGCCTTGCGTCTGTGGTGAGCCGATTGTCTGTCCATCACCTGAGCCGTGGCGGTCACAAACCGAAGCGGCTCAAGGGCG GACCGCACTGAGGCGGGCCGCTCCGGCAGCTTTCCGGGCCTCTCGGGGTCCACACGGATGGAGACTTCCCATGCTTGACC TTCGCACCGCCGCTTATGGCGCCACCGCCCTGCGCATCACGCTCGGCCTGATGTTCATCTCCCACGCCTATCTGAAGTTC GCGATCTTCACGGTCCCCGGCTTCGAGGGCTATCTCGCCGCCCAGGGCCTGCCCACCTTCCTCGCCTGGCCGATCGTCCT CGGCGAGTTCATCGGCGGCACCGCCATCCTCGTCGGCTTCTACGGCCGCGTCGTCTCCCTGGCGCTGATCCCGCTGCTCG TGGGCGCCCTCATGGTCCATGCCCCGAACGGCTGGGTGTTCAACGTGGCCGGCGGCGGCTGGGAATATCCCGCTTTCCTC GCCATGGCGGCCTTTGCGCAGGGCCTGCTCGGCGACGGCGCCTTCGCCCTGAAGTCTGTGACGCTCTCCGAGCTGATCGG CACCAAGGCGACGCCCCGCGCCGCCTGA
Upstream 100 bases:
>100_bases GGATCAGCGGCTGGCTTGGCTCCACAGATAGCGCTGATCGGCCCCGGCGCCACGGCATTTCTATTGCGCTGATGCAATTC AGACTCTGCGAAATCTGGAA
Downstream 100 bases:
>100_bases TCTCTTCCCGCCAGTCATCGGCACCGGGCCGCGCCTTGAGCGCGGCCTTTGCCGTTTCCGTCCGGCGCCGGTTTGTGGTT TCTTCGGCGCGTGTGGTGCG
Product: DoxD-like protein
Products: NA
Alternate protein names: DoxD-Like Family Protein; DoxX Family; Transmembrane Protein; Oxidoreductase CatD; DoxD-Like Protein; Surfeit Locus 4-Related
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPCVCGEPIVCPSPEPWRSQTEAAQGRTALRRAAPAAFRASRGPHGWRLPMLDLRTAAYGATALRITLGLMFISHAYLKF AIFTVPGFEGYLAAQGLPTFLAWPIVLGEFIGGTAILVGFYGRVVSLALIPLLVGALMVHAPNGWVFNVAGGGWEYPAFL AMAAFAQGLLGDGAFALKSVTLSELIGTKATPRAA
Sequences:
>Translated_195_residues MPCVCGEPIVCPSPEPWRSQTEAAQGRTALRRAAPAAFRASRGPHGWRLPMLDLRTAAYGATALRITLGLMFISHAYLKF AIFTVPGFEGYLAAQGLPTFLAWPIVLGEFIGGTAILVGFYGRVVSLALIPLLVGALMVHAPNGWVFNVAGGGWEYPAFL AMAAFAQGLLGDGAFALKSVTLSELIGTKATPRAA >Mature_194_residues PCVCGEPIVCPSPEPWRSQTEAAQGRTALRRAAPAAFRASRGPHGWRLPMLDLRTAAYGATALRITLGLMFISHAYLKFA IFTVPGFEGYLAAQGLPTFLAWPIVLGEFIGGTAILVGFYGRVVSLALIPLLVGALMVHAPNGWVFNVAGGGWEYPAFLA MAAFAQGLLGDGAFALKSVTLSELIGTKATPRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20574; Mature: 20443
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCVCGEPIVCPSPEPWRSQTEAAQGRTALRRAAPAAFRASRGPHGWRLPMLDLRTAAYG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHH ATALRITLGLMFISHAYLKFAIFTVPGFEGYLAAQGLPTFLAWPIVLGEFIGGTAILVGF HHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCHHHHHHHH YGRVVSLALIPLLVGALMVHAPNGWVFNVAGGGWEYPAFLAMAAFAQGLLGDGAFALKSV HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH TLSELIGTKATPRAA HHHHHHCCCCCCCCC >Mature Secondary Structure PCVCGEPIVCPSPEPWRSQTEAAQGRTALRRAAPAAFRASRGPHGWRLPMLDLRTAAYG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHH ATALRITLGLMFISHAYLKFAIFTVPGFEGYLAAQGLPTFLAWPIVLGEFIGGTAILVGF HHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCHHHHHHHH YGRVVSLALIPLLVGALMVHAPNGWVFNVAGGGWEYPAFLAMAAFAQGLLGDGAFALKSV HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH TLSELIGTKATPRAA HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA