| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158421775
Identifier: 158421775
GI number: 158421775
Start: 182522
End: 183283
Strand: Reverse
Name: 158421775
Synonym: AZC_0151
Alternate gene names: NA
Gene position: 183283-182522 (Counterclockwise)
Preceding gene: 158421780
Following gene: 158421773
Centisome position: 3.41
GC content: 68.37
Gene sequence:
>762_bases TTGGCGGCCGATGCTAAGACATCGCCGCGTCCACACGCGGGAATGATGCCGCACGAACACGCCATCCGCACCACAAAGGC TCCCATGTCCCGCTCCACCCCTCCCGTTCCGACCCTGGGTGCGGCCTTGCGGCGAGGCGTGCGCCTGCACCGCCGGCTCG CCATCGCCGTGGGGGTCGCCATCGTGATCGTGCTTTTCGCGCCCATGCTGAGCTTCCGCACCCGCCTGCTGGTGGGCTGG GACGCGGGCATCGCGCTGTGGCTCATCCTCACCCTGCATATGGTCAACGGCTCCAATGCGGCGAAGATCCGGGCCCGTGC CGCCGAGGAGGACGAAGGCGCCGCCGCCATCCTCATCGGCTGCCTGCTCGCCAGCTTCAGCAGCCTCGTGGCGGTGGTGA TGGAGGCGGGAGCGACCGCCCATGCCAGCGGCGCGGCGGCAGCGCACATCCTGCTCGCCATCGGCACGCTGGCGCTGTCC TGGTGCTTCATCCACGGCATCTACGCGCTGCACTATGCCCGCGAATATTATGCGCCCGACGTCGACTGCCATCCCATGCT CGGCTTTCCGGGCTCGCAGGAGCCGGATGCCTGGGACTTCATGTATTTCTCCTTCACCATCGGCACCTCGGCGCAGACGG CGGACGTGAGCGTGAACTCGGCGCGGATGCGCCGCTTCGTGCTCGGCCACCAGCTCGTGGCCTATGCCTTCAACGCCTCC GTGCTGGCGCTGGGCGTCAACGTCGCGGCGGGACTGGTCTGA
Upstream 100 bases:
>100_bases CCGGCAGCAGAGGCCCGCCGGGAGCGATGCCGCCCCGCGCATCGTTGGGAATCGTCATGGAAGCCTCCATCCGCAACCTG GAGCGCAATCATAGGCGACC
Downstream 100 bases:
>100_bases CCCCACCGCGACGGTTGTTTGCCGGCTATTTCGCCGCGACCGTCGGCGTCGGCAGCAGTTGCAGCGTGCCGATGACCTGC TGGCCGAAGCTGTTCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAADAKTSPRPHAGMMPHEHAIRTTKAPMSRSTPPVPTLGAALRRGVRLHRRLAIAVGVAIVIVLFAPMLSFRTRLLVGW DAGIALWLILTLHMVNGSNAAKIRARAAEEDEGAAAILIGCLLASFSSLVAVVMEAGATAHASGAAAAHILLAIGTLALS WCFIHGIYALHYAREYYAPDVDCHPMLGFPGSQEPDAWDFMYFSFTIGTSAQTADVSVNSARMRRFVLGHQLVAYAFNAS VLALGVNVAAGLV
Sequences:
>Translated_253_residues MAADAKTSPRPHAGMMPHEHAIRTTKAPMSRSTPPVPTLGAALRRGVRLHRRLAIAVGVAIVIVLFAPMLSFRTRLLVGW DAGIALWLILTLHMVNGSNAAKIRARAAEEDEGAAAILIGCLLASFSSLVAVVMEAGATAHASGAAAAHILLAIGTLALS WCFIHGIYALHYAREYYAPDVDCHPMLGFPGSQEPDAWDFMYFSFTIGTSAQTADVSVNSARMRRFVLGHQLVAYAFNAS VLALGVNVAAGLV >Mature_252_residues AADAKTSPRPHAGMMPHEHAIRTTKAPMSRSTPPVPTLGAALRRGVRLHRRLAIAVGVAIVIVLFAPMLSFRTRLLVGWD AGIALWLILTLHMVNGSNAAKIRARAAEEDEGAAAILIGCLLASFSSLVAVVMEAGATAHASGAAAAHILLAIGTLALSW CFIHGIYALHYAREYYAPDVDCHPMLGFPGSQEPDAWDFMYFSFTIGTSAQTADVSVNSARMRRFVLGHQLVAYAFNASV LALGVNVAAGLV
Specific function: Unknown
COG id: COG4291
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26826; Mature: 26694
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADAKTSPRPHAGMMPHEHAIRTTKAPMSRSTPPVPTLGAALRRGVRLHRRLAIAVGVA CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVIVLFAPMLSFRTRLLVGWDAGIALWLILTLHMVNGSNAAKIRARAAEEDEGAAAILIG HHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHH CLLASFSSLVAVVMEAGATAHASGAAAAHILLAIGTLALSWCFIHGIYALHYAREYYAPD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VDCHPMLGFPGSQEPDAWDFMYFSFTIGTSAQTADVSVNSARMRRFVLGHQLVAYAFNAS CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH VLALGVNVAAGLV HEEEHHHHHHCCC >Mature Secondary Structure AADAKTSPRPHAGMMPHEHAIRTTKAPMSRSTPPVPTLGAALRRGVRLHRRLAIAVGVA CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVIVLFAPMLSFRTRLLVGWDAGIALWLILTLHMVNGSNAAKIRARAAEEDEGAAAILIG HHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHH CLLASFSSLVAVVMEAGATAHASGAAAAHILLAIGTLALSWCFIHGIYALHYAREYYAPD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VDCHPMLGFPGSQEPDAWDFMYFSFTIGTSAQTADVSVNSARMRRFVLGHQLVAYAFNAS CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH VLALGVNVAAGLV HEEEHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA