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The map label for this gene is yejB [H]

Identifier: 158421757

GI number: 158421757

Start: 159894

End: 161006

Strand: Reverse

Name: yejB [H]

Synonym: AZC_0133

Alternate gene names: 158421757

Gene position: 161006-159894 (Counterclockwise)

Preceding gene: 158421758

Following gene: 158421756

Centisome position: 3.0

GC content: 64.06

Gene sequence:

>1113_bases
ATGCTCGCTTATATCGTCCGCCGTCTCGCGCTCATGGTGCCGACCATCCTCGGCATCATGCTGGTGTCCTTCGTCGTCGT
GCAGTTCGCCCCCGGCGGCCCCGTCGAGCGCGTGATCGCGCAGCTGACAGGCGATGACGTCTCCGCCACCGCCCGCGTCT
CCGGCGGCGGCGGCGATTTCGCGGGCGGCGCGCAGGCGCCCGGTGCCGGCGGCGGCGGGGCGGACGCCTCGAAATATCGC
GGCGCGCAGGGCCTCGACCCCAATTTCATCAAGGAGCTGGAAAAGCAGTTCGGCTTCGACAAGCCCCCCGCCGAGCGCTT
CGCTTTGATGATCTGGAATTATGTGCGGTTCGACTTCGGACGCTCCTATTTCCGCGACATCTCGGTGCTGGACCTCATCG
CGGAGAAGCTGCCCGTCTCCATCTCCCTCGGGCTCTGGATGACGCTGCTCACCTACGCCATCTCCATTCCGCTCGGCATC
TCCAAGGCCATGCGGGACGGCTCGCGCTTCGATGTATGGACCTCGGCGGTCATCATCGTCGGCTATGCTATCCCGTCCTT
CCTCTTCGCCATCCTGCTCATCATCCTGTTCGCGGGCGGCTCGTTCCTCGACTGGTTCCCCCTGCGGGGCCTCACCTCCG
ACAATTGGGCGCAGATGAGCTGGCCCCAGCGCATTGGCGATTATGCCTGGCATCTCGTGCTGCCGCTCACCTCCATGGTG
CTCGGGGCGTTCGCCACCATGACGCTGCTGACGAAAAACTCGTTCCTTGAGGAAATCCGCAAGCAATATGTCATCACGGC
GCGGATGAAGGGACTGCCCGAGCGCGCCGTGCTCTACCGGCACGTGTTCCGCAATGCCATGCTCATCGTCATCGCCGGCT
TTCCGAGCGCCTTCATCTCGGCCTTCTTCACCGGCTCGCTGCTGATCGAGACCATCTTCTCCCTCGATGGCCTCGGCCTG
CTCGGCTTCGAGAGCGTACTGAACCGCGACTATCCGGTGGTGTTCGCCACCCTCTACATCTTCTCGCTGGCCGGCCTTCT
CATCGGCCTCGTCTCGGACCTCACCTACATGCTGGTCGATCCGCGCATCGACTTCGAGACGCGGGACGTGTGA

Upstream 100 bases:

>100_bases
ATCCGCCACCCGTGGTGGAGCCCGGCCCGGCGTCTCCGCAAAAGGACGGTTGACGCCGCGCCGTCGGATACCGCACGGTC
CATCCAGTTCCGGAGACCCG

Downstream 100 bases:

>100_bases
GCGCCATGGACACCACCGCCAACGCCCTCCCCGCCACCGACGCCCCGCGCAAGCGGCCCTTCTTCTCGCCGCTGAACCAG
CGCCGCATCACCAACTTCCG

Product: peptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MLAYIVRRLALMVPTILGIMLVSFVVVQFAPGGPVERVIAQLTGDDVSATARVSGGGGDFAGGAQAPGAGGGGADASKYR
GAQGLDPNFIKELEKQFGFDKPPAERFALMIWNYVRFDFGRSYFRDISVLDLIAEKLPVSISLGLWMTLLTYAISIPLGI
SKAMRDGSRFDVWTSAVIIVGYAIPSFLFAILLIILFAGGSFLDWFPLRGLTSDNWAQMSWPQRIGDYAWHLVLPLTSMV
LGAFATMTLLTKNSFLEEIRKQYVITARMKGLPERAVLYRHVFRNAMLIVIAGFPSAFISAFFTGSLLIETIFSLDGLGL
LGFESVLNRDYPVVFATLYIFSLAGLLIGLVSDLTYMLVDPRIDFETRDV

Sequences:

>Translated_370_residues
MLAYIVRRLALMVPTILGIMLVSFVVVQFAPGGPVERVIAQLTGDDVSATARVSGGGGDFAGGAQAPGAGGGGADASKYR
GAQGLDPNFIKELEKQFGFDKPPAERFALMIWNYVRFDFGRSYFRDISVLDLIAEKLPVSISLGLWMTLLTYAISIPLGI
SKAMRDGSRFDVWTSAVIIVGYAIPSFLFAILLIILFAGGSFLDWFPLRGLTSDNWAQMSWPQRIGDYAWHLVLPLTSMV
LGAFATMTLLTKNSFLEEIRKQYVITARMKGLPERAVLYRHVFRNAMLIVIAGFPSAFISAFFTGSLLIETIFSLDGLGL
LGFESVLNRDYPVVFATLYIFSLAGLLIGLVSDLTYMLVDPRIDFETRDV
>Mature_370_residues
MLAYIVRRLALMVPTILGIMLVSFVVVQFAPGGPVERVIAQLTGDDVSATARVSGGGGDFAGGAQAPGAGGGGADASKYR
GAQGLDPNFIKELEKQFGFDKPPAERFALMIWNYVRFDFGRSYFRDISVLDLIAEKLPVSISLGLWMTLLTYAISIPLGI
SKAMRDGSRFDVWTSAVIIVGYAIPSFLFAILLIILFAGGSFLDWFPLRGLTSDNWAQMSWPQRIGDYAWHLVLPLTSMV
LGAFATMTLLTKNSFLEEIRKQYVITARMKGLPERAVLYRHVFRNAMLIVIAGFPSAFISAFFTGSLLIETIFSLDGLGL
LGFESVLNRDYPVVFATLYIFSLAGLLIGLVSDLTYMLVDPRIDFETRDV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=368, Percent_Identity=58.9673913043478, Blast_Score=448, Evalue=1e-127,
Organism=Escherichia coli, GI1787497, Length=366, Percent_Identity=26.775956284153, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1789965, Length=382, Percent_Identity=28.7958115183246, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787053, Length=371, Percent_Identity=28.3018867924528, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1789888, Length=363, Percent_Identity=24.5179063360882, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787550, Length=264, Percent_Identity=24.6212121212121, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787761, Length=286, Percent_Identity=25.8741258741259, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40621; Mature: 40621

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYIVRRLALMVPTILGIMLVSFVVVQFAPGGPVERVIAQLTGDDVSATARVSGGGGDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCC
AGGAQAPGAGGGGADASKYRGAQGLDPNFIKELEKQFGFDKPPAERFALMIWNYVRFDFG
CCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RSYFRDISVLDLIAEKLPVSISLGLWMTLLTYAISIPLGISKAMRDGSRFDVWTSAVIIV
HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHH
GYAIPSFLFAILLIILFAGGSFLDWFPLRGLTSDNWAQMSWPQRIGDYAWHLVLPLTSMV
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
LGAFATMTLLTKNSFLEEIRKQYVITARMKGLPERAVLYRHVFRNAMLIVIAGFPSAFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHH
AFFTGSLLIETIFSLDGLGLLGFESVLNRDYPVVFATLYIFSLAGLLIGLVSDLTYMLVD
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRIDFETRDV
CCCCCCCCCC
>Mature Secondary Structure
MLAYIVRRLALMVPTILGIMLVSFVVVQFAPGGPVERVIAQLTGDDVSATARVSGGGGDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCC
AGGAQAPGAGGGGADASKYRGAQGLDPNFIKELEKQFGFDKPPAERFALMIWNYVRFDFG
CCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RSYFRDISVLDLIAEKLPVSISLGLWMTLLTYAISIPLGISKAMRDGSRFDVWTSAVIIV
HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHH
GYAIPSFLFAILLIILFAGGSFLDWFPLRGLTSDNWAQMSWPQRIGDYAWHLVLPLTSMV
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
LGAFATMTLLTKNSFLEEIRKQYVITARMKGLPERAVLYRHVFRNAMLIVIAGFPSAFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHH
AFFTGSLLIETIFSLDGLGLLGFESVLNRDYPVVFATLYIFSLAGLLIGLVSDLTYMLVD
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRIDFETRDV
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]