| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is exuT [H]
Identifier: 158421731
GI number: 158421731
Start: 127075
End: 128340
Strand: Reverse
Name: exuT [H]
Synonym: AZC_0107
Alternate gene names: 158421731
Gene position: 128340-127075 (Counterclockwise)
Preceding gene: 158421737
Following gene: 158421730
Centisome position: 2.39
GC content: 68.17
Gene sequence:
>1266_bases ATGGCGCCGACAAGATACCGCTGGTTCGTGATCTTCCTGCTCTTCGCCATCACGGTGGTGAACTATATCGACCGCGCCGC CATCGCTTATGCCATCACTGCCATGGAGCGCGATCTCGGCCTCTCGCCTGCCGCCGCGGGCAGCATCCTCGGCGCGTTCG GCGTCGGCTATGCGATCACCACCCTGCTCGGCGGCTTCGCGGTGGATCGCTACGGCGCCCGCCTCGTGCTCACCATCTCC GCCGTGCTGTGGAGCCTGTCCATCGGCGGCACCGCCATGGCCACCGGCTTTGCCAGCCTCTATGCGGCCCGCGTGCTGCT CGGCGTGTCCGAGGGGCCGAACTTCCCGGCGCTGACCGGGGCGGTGAGCCGCTGGCTCGCGCCCAACGAGCGGGCCACCG CGCTCGGCAACGCTCTGGTGGCGGTGCCAGTGGCCCTCGCCATCGGCGGGCCCATCGTCACGCAGCTTCTGGCCCATCTG GACTGGCGCACGGCCTTCGGCGTCCTGTTCGCGCTCTCCATCATGTGGGTGCCGCTCTGGCTGGTCTTCTTCCGCAACCG GCCGGAAGACTCCCGCTTCGTGAACGCTGCGGAACTCGCCCACATCCGCACGCCCGATGCGACTGGGCCCGCCAAGCCTG CGGCGGGACACGGCCCCGGCCTCGCGCGGCTGCTGCTGACCAATCCCACGCTGGTGTCCAATTACTGGGCCTTCTTCGTC TTCGGCTATTTCCTGTTCTTCTTCATGACCTGGCTGCCCAGCTATCTGGAGCAGGCCTATCATCTCAACCTGAAGCAGGT CGGCCTGTTCACCGTGCTGCCCTGGCTGGCAGCGGCGGTCGCCCTGTGGTCCATGGGCCGCTGGTCGGACCATCTGCTGC GCACCACGGGTCGCCTGCGGGTGGCGCGCTCCTATCTCATCGCCGGCTCGCAACTGGTGGCGGCGCTCGCCATCGTGCCG GTCGCACTCACGGACAATCTCGCGGTGGCTATCACCGGCATCACGGTGGCGGTGGCCGCCTCCATGGGATCTAACGCCGC TTATTATGCGGTGAATGTGGATGTGGTCCCTGAACGGGCGGCCTCGGCGCTCGGCATCATGGACTTCGCCTTCGCGCTTG CCGGCTTCCTCGCCCCCGCCATCACCGGCTGGGTGCTGGCGCTGCGGGGCTCCTTCACCGACGGCTTCGCGCTCATGGCG GCGCTGGCTCTATCCTCGGTCGTGGTCGTGCTGCTCTTCCACCATCCCGACCGCCACCGGGCCTGA
Upstream 100 bases:
>100_bases CATGCCGTCCGCCGCTGGTCCATGGCTGGCGCCCGCAACGTGCGACTGTTGCGCGCACGCCAGCTGTCCTATGGTGGCGC CGTGCGTAGGGGAGCGTTCG
Downstream 100 bases:
>100_bases GGCATCAGGCCGGACGGCCATGCGGAGGGGTGAGTTGAATCGCGGGGGCGAATCGCTATGACTGGTCCCTCGCATTCGAT GGTCAAGGCAAAGCGCAGGC
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MAPTRYRWFVIFLLFAITVVNYIDRAAIAYAITAMERDLGLSPAAAGSILGAFGVGYAITTLLGGFAVDRYGARLVLTIS AVLWSLSIGGTAMATGFASLYAARVLLGVSEGPNFPALTGAVSRWLAPNERATALGNALVAVPVALAIGGPIVTQLLAHL DWRTAFGVLFALSIMWVPLWLVFFRNRPEDSRFVNAAELAHIRTPDATGPAKPAAGHGPGLARLLLTNPTLVSNYWAFFV FGYFLFFFMTWLPSYLEQAYHLNLKQVGLFTVLPWLAAAVALWSMGRWSDHLLRTTGRLRVARSYLIAGSQLVAALAIVP VALTDNLAVAITGITVAVAASMGSNAAYYAVNVDVVPERAASALGIMDFAFALAGFLAPAITGWVLALRGSFTDGFALMA ALALSSVVVVLLFHHPDRHRA
Sequences:
>Translated_421_residues MAPTRYRWFVIFLLFAITVVNYIDRAAIAYAITAMERDLGLSPAAAGSILGAFGVGYAITTLLGGFAVDRYGARLVLTIS AVLWSLSIGGTAMATGFASLYAARVLLGVSEGPNFPALTGAVSRWLAPNERATALGNALVAVPVALAIGGPIVTQLLAHL DWRTAFGVLFALSIMWVPLWLVFFRNRPEDSRFVNAAELAHIRTPDATGPAKPAAGHGPGLARLLLTNPTLVSNYWAFFV FGYFLFFFMTWLPSYLEQAYHLNLKQVGLFTVLPWLAAAVALWSMGRWSDHLLRTTGRLRVARSYLIAGSQLVAALAIVP VALTDNLAVAITGITVAVAASMGSNAAYYAVNVDVVPERAASALGIMDFAFALAGFLAPAITGWVLALRGSFTDGFALMA ALALSSVVVVLLFHHPDRHRA >Mature_420_residues APTRYRWFVIFLLFAITVVNYIDRAAIAYAITAMERDLGLSPAAAGSILGAFGVGYAITTLLGGFAVDRYGARLVLTISA VLWSLSIGGTAMATGFASLYAARVLLGVSEGPNFPALTGAVSRWLAPNERATALGNALVAVPVALAIGGPIVTQLLAHLD WRTAFGVLFALSIMWVPLWLVFFRNRPEDSRFVNAAELAHIRTPDATGPAKPAAGHGPGLARLLLTNPTLVSNYWAFFVF GYFLFFFMTWLPSYLEQAYHLNLKQVGLFTVLPWLAAAVALWSMGRWSDHLLRTTGRLRVARSYLIAGSQLVAALAIVPV ALTDNLAVAITGITVAVAASMGSNAAYYAVNVDVVPERAASALGIMDFAFALAGFLAPAITGWVLALRGSFTDGFALMAA LALSSVVVVLLFHHPDRHRA
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI154350196, Length=406, Percent_Identity=24.8768472906404, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI9945322, Length=353, Percent_Identity=24.3626062322946, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI6912666, Length=402, Percent_Identity=22.636815920398, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI21322234, Length=385, Percent_Identity=21.038961038961, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI9966811, Length=385, Percent_Identity=21.8181818181818, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI148743791, Length=388, Percent_Identity=23.4536082474227, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI4885441, Length=394, Percent_Identity=23.6040609137056, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI2367379, Length=391, Percent_Identity=28.1329923273657, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI87082320, Length=409, Percent_Identity=28.1173594132029, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1789515, Length=420, Percent_Identity=27.8571428571429, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789152, Length=423, Percent_Identity=26.9503546099291, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI2367193, Length=413, Percent_Identity=26.634382566586, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082071, Length=431, Percent_Identity=25.9860788863109, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17535049, Length=421, Percent_Identity=23.9904988123515, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17554148, Length=372, Percent_Identity=21.7741935483871, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193205400, Length=338, Percent_Identity=23.6686390532544, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533556, Length=352, Percent_Identity=21.875, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI115533554, Length=358, Percent_Identity=21.7877094972067, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554962, Length=345, Percent_Identity=21.1594202898551, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17532009, Length=391, Percent_Identity=21.4833759590793, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17560030, Length=239, Percent_Identity=22.5941422594142, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193208223, Length=361, Percent_Identity=22.1606648199446, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17561498, Length=253, Percent_Identity=25.6916996047431, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17561502, Length=352, Percent_Identity=23.8636363636364, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32567120, Length=352, Percent_Identity=23.8636363636364, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573708, Length=372, Percent_Identity=23.6559139784946, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI28573707, Length=372, Percent_Identity=23.6559139784946, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24639764, Length=425, Percent_Identity=25.1764705882353, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24648416, Length=415, Percent_Identity=23.3734939759036, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI21356189, Length=415, Percent_Identity=23.3734939759036, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24658658, Length=412, Percent_Identity=25.9708737864078, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI19920686, Length=415, Percent_Identity=23.3734939759036, Blast_Score=95, Evalue=7e-20, Organism=Drosophila melanogaster, GI24584153, Length=363, Percent_Identity=23.9669421487603, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI24580790, Length=389, Percent_Identity=21.8508997429306, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI45550495, Length=421, Percent_Identity=24.2280285035629, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI28573299, Length=395, Percent_Identity=23.0379746835443, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI45552797, Length=421, Percent_Identity=26.1282660332542, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24658689, Length=442, Percent_Identity=26.0180995475113, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI20129235, Length=374, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24658666, Length=420, Percent_Identity=25, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24654215, Length=424, Percent_Identity=23.3490566037736, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI19922400, Length=424, Percent_Identity=23.3490566037736, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI20130167, Length=397, Percent_Identity=22.1662468513854, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI45550460, Length=414, Percent_Identity=23.1884057971014, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641682, Length=426, Percent_Identity=23.0046948356808, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24653727, Length=373, Percent_Identity=22.7882037533512, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24658674, Length=417, Percent_Identity=22.7817745803357, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24655255, Length=363, Percent_Identity=23.4159779614325, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24583789, Length=379, Percent_Identity=23.2189973614776, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI45550364, Length=442, Percent_Identity=23.3031674208145, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI62484226, Length=370, Percent_Identity=23.7837837837838, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24655271, Length=410, Percent_Identity=21.219512195122, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI20130135, Length=411, Percent_Identity=21.4111922141119, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24658696, Length=338, Percent_Identity=22.7810650887574, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44928; Mature: 44797
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTRYRWFVIFLLFAITVVNYIDRAAIAYAITAMERDLGLSPAAAGSILGAFGVGYAIT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLLGGFAVDRYGARLVLTISAVLWSLSIGGTAMATGFASLYAARVLLGVSEGPNFPALTG HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AVSRWLAPNERATALGNALVAVPVALAIGGPIVTQLLAHLDWRTAFGVLFALSIMWVPLW HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFFRNRPEDSRFVNAAELAHIRTPDATGPAKPAAGHGPGLARLLLTNPTLVSNYWAFFV HHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEHEECCCHHHHHHHHHHH FGYFLFFFMTWLPSYLEQAYHLNLKQVGLFTVLPWLAAAVALWSMGRWSDHLLRTTGRLR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VARSYLIAGSQLVAALAIVPVALTDNLAVAITGITVAVAASMGSNAAYYAVNVDVVPERA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEEECCHHH ASALGIMDFAFALAGFLAPAITGWVLALRGSFTDGFALMAALALSSVVVVLLFHHPDRHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC A C >Mature Secondary Structure APTRYRWFVIFLLFAITVVNYIDRAAIAYAITAMERDLGLSPAAAGSILGAFGVGYAIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLLGGFAVDRYGARLVLTISAVLWSLSIGGTAMATGFASLYAARVLLGVSEGPNFPALTG HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AVSRWLAPNERATALGNALVAVPVALAIGGPIVTQLLAHLDWRTAFGVLFALSIMWVPLW HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFFRNRPEDSRFVNAAELAHIRTPDATGPAKPAAGHGPGLARLLLTNPTLVSNYWAFFV HHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEHEECCCHHHHHHHHHHH FGYFLFFFMTWLPSYLEQAYHLNLKQVGLFTVLPWLAAAVALWSMGRWSDHLLRTTGRLR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VARSYLIAGSQLVAALAIVPVALTDNLAVAITGITVAVAASMGSNAAYYAVNVDVVPERA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEEECCHHH ASALGIMDFAFALAGFLAPAITGWVLALRGSFTDGFALMAALALSSVVVVLLFHHPDRHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]