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The map label for this gene is ssuC [C]

Identifier: 158421648

GI number: 158421648

Start: 25773

End: 26543

Strand: Reverse

Name: ssuC [C]

Synonym: AZC_0024

Alternate gene names: 158421648

Gene position: 26543-25773 (Counterclockwise)

Preceding gene: 158421649

Following gene: NA

Centisome position: 0.49

GC content: 66.28

Gene sequence:

>771_bases
ATGAAGATCACCGCCGAAGACATCACGCCCGTCGCCTTCACGGTTGGGCTTTTCGTCATCTGGGAAGCGGCCTGCCGCCT
GTTCCGTATCGACGCCTTCATCCTGCCCGCGCCGAGCGCCATCTTCGCCGCCGCCGCCCAATTCTGGTGGCCGCTGCTGC
GCAATTCCTTCGTCACGCTCTGGACCACGGTAGCAGGCTTCGCGCTGGCGGTGGTGTTCGGCATTGCGCTGGGCCTGGTG
GTGGGCTGGTCGCGGGCCATCTATCGCGGCCTCTATCCGGTGATGATCGGCTTCAACTCCATCCCCAAGGTGGCGGTGGT
GCCCATCCTCATCATGTGGTTCGGCATCGGCGAGATCCCGGCCATCCTCACCGCCTTCCTCATCTCCTTCTTCCCCATCG
TGGTGAATGTGGCCACCGGCCTTGCCACCACGGAGCCGGAGCTGGAGGACGTGCTGCGGGCGCTCGGCGCCTCCAAGCTC
GACATCATGCGCAAGGTGGGCATCCCGCGCACGGCGCCCTATCTGTTTGGCTCGCTGAAGGTGGCCATCACGCTGGCTTT
CGTCGGCGCGGTGGTCTCGGAGACCATCGGCGCCAATGCCGGCGTCGGGCACCTGATGGTGCAGGCGGGCTCGAACTTCC
AGATGCCGCTGGTGTTCGCCGGACTGCTGGCGCTCGCGGTGCAGGGCATATTCATGTACGCGGTCTTCGCAGTGCTGGAA
CGCCGCATGGCCGGCTGGGCCTTCCGGGCCTCCATGAGCGCCGCCGGCTGA

Upstream 100 bases:

>100_bases
TGGAGTTTCCTCGCCCGCGCCCGCTGGAGGTCTGCTACGAGCCGGCCTTCACCCAACTGGTCCACGAACTGCGCGGCAAG
ATCGCCGAGGTGCGTCAGGC

Downstream 100 bases:

>100_bases
GCCGGCCGCTCGCCTCATTCCCCGAGGCAAGGTACGGACAAGCTTGCGCTTGGCATGATGGCGGCCGCGACTGGCCCCGC
AGCGACAGCGCGCGTCCATT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKITAEDITPVAFTVGLFVIWEAACRLFRIDAFILPAPSAIFAAAAQFWWPLLRNSFVTLWTTVAGFALAVVFGIALGLV
VGWSRAIYRGLYPVMIGFNSIPKVAVVPILIMWFGIGEIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKL
DIMRKVGIPRTAPYLFGSLKVAITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVQGIFMYAVFAVLE
RRMAGWAFRASMSAAG

Sequences:

>Translated_256_residues
MKITAEDITPVAFTVGLFVIWEAACRLFRIDAFILPAPSAIFAAAAQFWWPLLRNSFVTLWTTVAGFALAVVFGIALGLV
VGWSRAIYRGLYPVMIGFNSIPKVAVVPILIMWFGIGEIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKL
DIMRKVGIPRTAPYLFGSLKVAITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVQGIFMYAVFAVLE
RRMAGWAFRASMSAAG
>Mature_256_residues
MKITAEDITPVAFTVGLFVIWEAACRLFRIDAFILPAPSAIFAAAAQFWWPLLRNSFVTLWTTVAGFALAVVFGIALGLV
VGWSRAIYRGLYPVMIGFNSIPKVAVVPILIMWFGIGEIPAILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKL
DIMRKVGIPRTAPYLFGSLKVAITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVQGIFMYAVFAVLE
RRMAGWAFRASMSAAG

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=245, Percent_Identity=26.9387755102041, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27375; Mature: 27375

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITAEDITPVAFTVGLFVIWEAACRLFRIDAFILPAPSAIFAAAAQFWWPLLRNSFVTL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
WTTVAGFALAVVFGIALGLVVGWSRAIYRGLYPVMIGFNSIPKVAVVPILIMWFGIGEIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH
AILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKLDIMRKVGIPRTAPYLFGSLK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHH
VAITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVQGIFMYAVFAVLE
HHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMAGWAFRASMSAAG
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKITAEDITPVAFTVGLFVIWEAACRLFRIDAFILPAPSAIFAAAAQFWWPLLRNSFVTL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
WTTVAGFALAVVFGIALGLVVGWSRAIYRGLYPVMIGFNSIPKVAVVPILIMWFGIGEIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH
AILTAFLISFFPIVVNVATGLATTEPELEDVLRALGASKLDIMRKVGIPRTAPYLFGSLK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHH
VAITLAFVGAVVSETIGANAGVGHLMVQAGSNFQMPLVFAGLLALAVQGIFMYAVFAVLE
HHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMAGWAFRASMSAAG
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA