| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836602
GI number: 15836602
Start: 1222217
End: 1223659
Strand: Reverse
Name: Not Available
Synonym: CPj1071
Alternate gene names: NA
Gene position: 1223659-1222217 (Counterclockwise)
Preceding gene: NA
Following gene: 15836601
Centisome position: 99.76
GC content: 41.09
Gene sequence:
>1443_bases ATGGTTTGCCCAAATAATTCTTGGTTCAGAATGTGTGGAAATTTCAACTGCGAATGGGTTGAAGTAACAACAACAGAAGA AACAACGCGGCAATCGGCTTCAGATATAAGCGAAGAAGCTGGTTCGAGTGGAGGAGCTGCTCCTATAACTACGCAACCTA CTAAAATTACAAAAGTAGAGAAACGTGTCCAATTTAATACTGCTCAAGGTGATGAAAGTACAATACACATGATCCAAGAA GCAGGAGAATTGGTAGACTCCATTCTATCACATAGACGAACGCAAGGATGTACAGAGTATTGTTATGACAGTTACGCAAC TGGATGTGGTCAGCGTTGCGGATCTTTTGGAAGACTCATTTGTGGAACGTATAAAGCGTGTTGCTTAGACAGAGAGGATA ATCAGGTTGCTGGACTTGTCCATGAATGCGAACAGACCCATGGTCCTATTGCCGTTGCTTTAGCTGCTAAAACTATGGGC CTCAACTTAATGGAACTTGTAGAAAAAAACACTATTTTGTCTGAAGAACAGAAAAATGAATTTAGACAGCATTGCTCGGA AGCTAAAACCCAGCTCTATGGAACGATGCAGAGCCTTTCTCAAAACTTTTTCCTTGAAGGAGTCAACAGCATTAGAGAAC GCGGTCTAGACGATTCACTAGTCCAAGCCGTGCTAAGCTTTATTGCTACAAGGTCTTGGGAAAAAACTATAGAATCAGAG GAAGCCTCAGGAACATCTTCTGCTTCTAATTCTACACGCATTCCTGCGTGCTATATCTTAAATACGAGCCCCTTAACGAC GTCACGCCTATCCTGTGGATCAAGAGATGCGCGACGCCCATCTTCAGTCGGTGCAGAGCCCCAGTACGTAGCAAAAAAAT ACAATGACAATGGCATGGCCAGACAATTAGGAAAAATCCAAGTCACCAATCTAAAAACAGGAGATTTTTCAGCTTTAGGT CCTTTTGGTCTCCTGATTGTGAAAATGCTGAATAGCTTTCTCTTATCTGCATCACAAAGCACATCTTCTATTCTAAAGCA CACAGGTGGAGAAATATGTTATACGTGCCCAAATTTTCGTGATATCGTCGTTTTATTGATGTTAGCGATTGGCTATTGCC CTGCAAATACCGATGAGACATCTGTCGTAGATATACACATGATAGATGATCCGATTATGACCATCTTCTATCGACTACAA TACAGCTATAGAACAGGGAAAACTTCAGCATCGTTTTTAAAAAAGAAACCCTCATTAGTAAGACAGGAAAGTCTTGATTG TCCTACCCCTGCAGAATCTGTCCCTCTCATGTCAAGTCTCGAAGAAGAAGATGAAAATGAAGATGATGATGAGGATGGGA ATTTGGCGTATCAACAGCGTATCCTTGAATGCTCGGGTCATTTACAAACTCTATTTTTAGGGATAAAAATAAACAAAGAA TAA
Upstream 100 bases:
>100_bases ACAGTCGCAAGCAGAGCATACCGACTCTTTTCCTGTTCTTAGAGAGTTCTTTTCAACTCTCTAAAACCTAAATAAATCTA AATATTAAAAAGGTACGACT
Downstream 100 bases:
>100_bases GATTCCTATTTTTTGCCGCGAAGCTTTTGTTCTATCCAAGAATCTATGTTTTCTTGAAAAGTTTGAGAACTTAGAAAAAA TTTTGCGGCATTTCTTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVEKRVQFNTAQGDESTIHMIQE AGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLICGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMG LNLMELVEKNTILSEEQKNEFRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMARQLGKIQVTNLKTGDFSALG PFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFRDIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQ YSYRTGKTSASFLKKKPSLVRQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE
Sequences:
>Translated_480_residues MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVEKRVQFNTAQGDESTIHMIQE AGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLICGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMG LNLMELVEKNTILSEEQKNEFRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMARQLGKIQVTNLKTGDFSALG PFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFRDIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQ YSYRTGKTSASFLKKKPSLVRQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE >Mature_480_residues MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVEKRVQFNTAQGDESTIHMIQE AGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLICGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMG LNLMELVEKNTILSEEQKNEFRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMARQLGKIQVTNLKTGDFSALG PFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFRDIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQ YSYRTGKTSASFLKKKPSLVRQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52917; Mature: 52917
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVE CCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH KRVQFNTAQGDESTIHMIQEAGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMGLNLMELVEKNTILSEEQKNE HHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCHHHHHH FRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMA CCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHH RQLGKIQVTNLKTGDFSALGPFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFR HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHH DIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQYSYRTGKTSASFLKKKPSLV HHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHCHHHH RQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCC >Mature Secondary Structure MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVE CCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH KRVQFNTAQGDESTIHMIQEAGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLI HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMGLNLMELVEKNTILSEEQKNE HHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCHHHHHH FRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMA CCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHH RQLGKIQVTNLKTGDFSALGPFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFR HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHH DIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQYSYRTGKTSASFLKKKPSLV HHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHCHHHH RQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA