Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836602

GI number: 15836602

Start: 1222217

End: 1223659

Strand: Reverse

Name: Not Available

Synonym: CPj1071

Alternate gene names: NA

Gene position: 1223659-1222217 (Counterclockwise)

Preceding gene: NA

Following gene: 15836601

Centisome position: 99.76

GC content: 41.09

Gene sequence:

>1443_bases
ATGGTTTGCCCAAATAATTCTTGGTTCAGAATGTGTGGAAATTTCAACTGCGAATGGGTTGAAGTAACAACAACAGAAGA
AACAACGCGGCAATCGGCTTCAGATATAAGCGAAGAAGCTGGTTCGAGTGGAGGAGCTGCTCCTATAACTACGCAACCTA
CTAAAATTACAAAAGTAGAGAAACGTGTCCAATTTAATACTGCTCAAGGTGATGAAAGTACAATACACATGATCCAAGAA
GCAGGAGAATTGGTAGACTCCATTCTATCACATAGACGAACGCAAGGATGTACAGAGTATTGTTATGACAGTTACGCAAC
TGGATGTGGTCAGCGTTGCGGATCTTTTGGAAGACTCATTTGTGGAACGTATAAAGCGTGTTGCTTAGACAGAGAGGATA
ATCAGGTTGCTGGACTTGTCCATGAATGCGAACAGACCCATGGTCCTATTGCCGTTGCTTTAGCTGCTAAAACTATGGGC
CTCAACTTAATGGAACTTGTAGAAAAAAACACTATTTTGTCTGAAGAACAGAAAAATGAATTTAGACAGCATTGCTCGGA
AGCTAAAACCCAGCTCTATGGAACGATGCAGAGCCTTTCTCAAAACTTTTTCCTTGAAGGAGTCAACAGCATTAGAGAAC
GCGGTCTAGACGATTCACTAGTCCAAGCCGTGCTAAGCTTTATTGCTACAAGGTCTTGGGAAAAAACTATAGAATCAGAG
GAAGCCTCAGGAACATCTTCTGCTTCTAATTCTACACGCATTCCTGCGTGCTATATCTTAAATACGAGCCCCTTAACGAC
GTCACGCCTATCCTGTGGATCAAGAGATGCGCGACGCCCATCTTCAGTCGGTGCAGAGCCCCAGTACGTAGCAAAAAAAT
ACAATGACAATGGCATGGCCAGACAATTAGGAAAAATCCAAGTCACCAATCTAAAAACAGGAGATTTTTCAGCTTTAGGT
CCTTTTGGTCTCCTGATTGTGAAAATGCTGAATAGCTTTCTCTTATCTGCATCACAAAGCACATCTTCTATTCTAAAGCA
CACAGGTGGAGAAATATGTTATACGTGCCCAAATTTTCGTGATATCGTCGTTTTATTGATGTTAGCGATTGGCTATTGCC
CTGCAAATACCGATGAGACATCTGTCGTAGATATACACATGATAGATGATCCGATTATGACCATCTTCTATCGACTACAA
TACAGCTATAGAACAGGGAAAACTTCAGCATCGTTTTTAAAAAAGAAACCCTCATTAGTAAGACAGGAAAGTCTTGATTG
TCCTACCCCTGCAGAATCTGTCCCTCTCATGTCAAGTCTCGAAGAAGAAGATGAAAATGAAGATGATGATGAGGATGGGA
ATTTGGCGTATCAACAGCGTATCCTTGAATGCTCGGGTCATTTACAAACTCTATTTTTAGGGATAAAAATAAACAAAGAA
TAA

Upstream 100 bases:

>100_bases
ACAGTCGCAAGCAGAGCATACCGACTCTTTTCCTGTTCTTAGAGAGTTCTTTTCAACTCTCTAAAACCTAAATAAATCTA
AATATTAAAAAGGTACGACT

Downstream 100 bases:

>100_bases
GATTCCTATTTTTTGCCGCGAAGCTTTTGTTCTATCCAAGAATCTATGTTTTCTTGAAAAGTTTGAGAACTTAGAAAAAA
TTTTGCGGCATTTCTTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVEKRVQFNTAQGDESTIHMIQE
AGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLICGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMG
LNLMELVEKNTILSEEQKNEFRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE
EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMARQLGKIQVTNLKTGDFSALG
PFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFRDIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQ
YSYRTGKTSASFLKKKPSLVRQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE

Sequences:

>Translated_480_residues
MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVEKRVQFNTAQGDESTIHMIQE
AGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLICGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMG
LNLMELVEKNTILSEEQKNEFRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE
EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMARQLGKIQVTNLKTGDFSALG
PFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFRDIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQ
YSYRTGKTSASFLKKKPSLVRQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE
>Mature_480_residues
MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVEKRVQFNTAQGDESTIHMIQE
AGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLICGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMG
LNLMELVEKNTILSEEQKNEFRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE
EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMARQLGKIQVTNLKTGDFSALG
PFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFRDIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQ
YSYRTGKTSASFLKKKPSLVRQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52917; Mature: 52917

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVE
CCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
KRVQFNTAQGDESTIHMIQEAGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
CGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMGLNLMELVEKNTILSEEQKNE
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCHHHHHH
FRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMA
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHH
RQLGKIQVTNLKTGDFSALGPFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFR
HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHH
DIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQYSYRTGKTSASFLKKKPSLV
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHCHHHH
RQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE
HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCC
>Mature Secondary Structure
MVCPNNSWFRMCGNFNCEWVEVTTTEETTRQSASDISEEAGSSGGAAPITTQPTKITKVE
CCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
KRVQFNTAQGDESTIHMIQEAGELVDSILSHRRTQGCTEYCYDSYATGCGQRCGSFGRLI
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
CGTYKACCLDREDNQVAGLVHECEQTHGPIAVALAAKTMGLNLMELVEKNTILSEEQKNE
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHHCHHHHHH
FRQHCSEAKTQLYGTMQSLSQNFFLEGVNSIRERGLDDSLVQAVLSFIATRSWEKTIESE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
EASGTSSASNSTRIPACYILNTSPLTTSRLSCGSRDARRPSSVGAEPQYVAKKYNDNGMA
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCHHH
RQLGKIQVTNLKTGDFSALGPFGLLIVKMLNSFLLSASQSTSSILKHTGGEICYTCPNFR
HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHH
DIVVLLMLAIGYCPANTDETSVVDIHMIDDPIMTIFYRLQYSYRTGKTSASFLKKKPSLV
HHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHCHHHH
RQESLDCPTPAESVPLMSSLEEEDENEDDDEDGNLAYQQRILECSGHLQTLFLGIKINKE
HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA