| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is yzeB
Identifier: 15836543
GI number: 15836543
Start: 1156824
End: 1158599
Strand: Reverse
Name: yzeB
Synonym: CPj1012
Alternate gene names: 15836543
Gene position: 1158599-1156824 (Counterclockwise)
Preceding gene: 15836545
Following gene: 15836542
Centisome position: 94.46
GC content: 42.34
Gene sequence:
>1776_bases ATGAAAAAAAAATTTATTTTCTACTTTGTTATCGTTTTTTCCCTGCTATTTCTTTGGGAGATGACGTCACGCCACCGACC CACGTTTTCCTTTTTCTGCCCTCCCCCCTCGAGCATTGCCTCTAGTACTCTCCAATCCCTTCCACTCTTGTTAACATCTG CTTGGCACACCTTAAAAGCGATTCTAGGAGGGTTCTTCCTTGCGATTACTCTCTCCATTGTTCTAGCAACAATTATGTTG TCTTATAAATCAGCTAAAGATCTCCTACAACCTCTTTTCATCCTGCTACAGTGCACTCCTATGTTTGCTCTGGCTCCACT GATTGTACTTTGGTTTGGCTGGGGAATCGGTGCTGTAATCGTCCCTACAGCACTCACCATATTCTTTCCGCTCACCCTGA CTATCTATCAGGGCATCTTATCAACACCAGAAGAACTTATAGAGCAATTCGTCCTTTGCGGAGCTACAAAATTCCAACTC CTGATCAAACTCCGGATTCCCCACGCTCTCCCCCACATATTCTCGGGATTAAAAATTGCTATAGGATCTGCAGGATTTGC TGCCATTGCAGGAGAATGGGTAGCCTCCCAATCGGGTCTCGGCATCCTTATGCTCGAAAGCCGCAGAAATTATGAAATGG AATTAGCATTCGCAGGACTCGCGACTCTCTCAATTCTCACCCTCAGCCTCTTCCAAATCACCTTGTTAATTGAAAAATTG ATTTTTTCACTATTCCGAGTAAAACGGATGAGCCTTAAGCACAAATCCGTAGCTAAAAAAGCTTTATCCGTACTCGCCTT AATTCCTATAATGCTTATTCCCTGGAAAGGAAACTCTAAATCTCCTCCTGACAAAAAAAATCTTACTTCACTAACACTTT TACTCGATTGGACCCCCAATCCTAACCATATTCCCCTCTATGCAGGAGTAGCCAAAGGATACTTCAAACAACACGGTTTG GATCTACAACTTCAAAAAAATACAGACTCAAGTTCTGCTGTTCCCCACGTTCTATTTGAACAAGTAGATATGGCCCTTTA CCATGCTCTCGGCATCATGAAGACCTCCATAAAAGGCATGCCAATACAAATCGTAGGGAGATTGATAGACAGTTCCCTGC AAGGATTTCTCTACAGAAGTCAGGACCCCATCTACAAATTTGAAGACCTAAATGGCAAAGTCTTAGGTTTCTGCTTAAAC AACTCCAGAGATCTAAATCGTCTACTTGAAACCTTAAATCGTAACGGTGTGGTTCCCTCTGAAGTCAAAAATGTAAGTTC TGATCTCATCTCTCCGATGTTATTAAACAAAATTGATTTCCTCTACGGCGCTTTCTACAATATTGAAGGAGTAAAATTAC AAACTTTAGGCATGCCCGTGAAATGCTTTCTCTCCGATACCTGTGATCTTCCCACAGGCCCCCAGTTGATTGTCTTTACT AAAAAGGGAACGAAAGCTAGCGAACCCGAAATTGTTGAAGCTTTCCAAAAAGCTCTTCAAGAAAGCATCATATTCTCAAA AGACCACCCCGAAGATGCTTTTAAACTCTACGCTAAAGAAACTAAAAGCATACCTAAAAATCTCTATCAGGAGTATCTCC AATGGGAGGAAACTTTCCCCCTCCTAGCTCAGTCCCAAGATCCCTTAAGCAAAGACCTTGTAGACAAACTCCTCGAAACA ATCATTAAACGGTATCCCGAACTTGCTTCAGAAGTCGCGAAGTTTTCTCTAAACGACCTCTACAATCCGTCACTACCAGA AGAACAGAGTGTGTAA
Upstream 100 bases:
>100_bases TATCCTCAGGAACTTCTACGATTCCTAAACTATCCTTTTCTTGTCGCATATCTATATTTCCCCTATGATTTAGGCTATTT TCTCGTTAATTACTTCAAAA
Downstream 100 bases:
>100_bases CTCACACCCTGTTCTAAAAAATATTACCTATAAATAAAATTTATACAAACCTCGATAAACTCTCCCAATTCCGAAGTATC CTCTAGAGGATTCCCTTGAA
Product: ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MKKKFIFYFVIVFSLLFLWEMTSRHRPTFSFFCPPPSSIASSTLQSLPLLLTSAWHTLKAILGGFFLAITLSIVLATIML SYKSAKDLLQPLFILLQCTPMFALAPLIVLWFGWGIGAVIVPTALTIFFPLTLTIYQGILSTPEELIEQFVLCGATKFQL LIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVASQSGLGILMLESRRNYEMELAFAGLATLSILTLSLFQITLLIEKL IFSLFRVKRMSLKHKSVAKKALSVLALIPIMLIPWKGNSKSPPDKKNLTSLTLLLDWTPNPNHIPLYAGVAKGYFKQHGL DLQLQKNTDSSSAVPHVLFEQVDMALYHALGIMKTSIKGMPIQIVGRLIDSSLQGFLYRSQDPIYKFEDLNGKVLGFCLN NSRDLNRLLETLNRNGVVPSEVKNVSSDLISPMLLNKIDFLYGAFYNIEGVKLQTLGMPVKCFLSDTCDLPTGPQLIVFT KKGTKASEPEIVEAFQKALQESIIFSKDHPEDAFKLYAKETKSIPKNLYQEYLQWEETFPLLAQSQDPLSKDLVDKLLET IIKRYPELASEVAKFSLNDLYNPSLPEEQSV
Sequences:
>Translated_591_residues MKKKFIFYFVIVFSLLFLWEMTSRHRPTFSFFCPPPSSIASSTLQSLPLLLTSAWHTLKAILGGFFLAITLSIVLATIML SYKSAKDLLQPLFILLQCTPMFALAPLIVLWFGWGIGAVIVPTALTIFFPLTLTIYQGILSTPEELIEQFVLCGATKFQL LIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVASQSGLGILMLESRRNYEMELAFAGLATLSILTLSLFQITLLIEKL IFSLFRVKRMSLKHKSVAKKALSVLALIPIMLIPWKGNSKSPPDKKNLTSLTLLLDWTPNPNHIPLYAGVAKGYFKQHGL DLQLQKNTDSSSAVPHVLFEQVDMALYHALGIMKTSIKGMPIQIVGRLIDSSLQGFLYRSQDPIYKFEDLNGKVLGFCLN NSRDLNRLLETLNRNGVVPSEVKNVSSDLISPMLLNKIDFLYGAFYNIEGVKLQTLGMPVKCFLSDTCDLPTGPQLIVFT KKGTKASEPEIVEAFQKALQESIIFSKDHPEDAFKLYAKETKSIPKNLYQEYLQWEETFPLLAQSQDPLSKDLVDKLLET IIKRYPELASEVAKFSLNDLYNPSLPEEQSV >Mature_591_residues MKKKFIFYFVIVFSLLFLWEMTSRHRPTFSFFCPPPSSIASSTLQSLPLLLTSAWHTLKAILGGFFLAITLSIVLATIML SYKSAKDLLQPLFILLQCTPMFALAPLIVLWFGWGIGAVIVPTALTIFFPLTLTIYQGILSTPEELIEQFVLCGATKFQL LIKLRIPHALPHIFSGLKIAIGSAGFAAIAGEWVASQSGLGILMLESRRNYEMELAFAGLATLSILTLSLFQITLLIEKL IFSLFRVKRMSLKHKSVAKKALSVLALIPIMLIPWKGNSKSPPDKKNLTSLTLLLDWTPNPNHIPLYAGVAKGYFKQHGL DLQLQKNTDSSSAVPHVLFEQVDMALYHALGIMKTSIKGMPIQIVGRLIDSSLQGFLYRSQDPIYKFEDLNGKVLGFCLN NSRDLNRLLETLNRNGVVPSEVKNVSSDLISPMLLNKIDFLYGAFYNIEGVKLQTLGMPVKCFLSDTCDLPTGPQLIVFT KKGTKASEPEIVEAFQKALQESIIFSKDHPEDAFKLYAKETKSIPKNLYQEYLQWEETFPLLAQSQDPLSKDLVDKLLET IIKRYPELASEVAKFSLNDLYNPSLPEEQSV
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=204, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI87081802, Length=144, Percent_Identity=28.4722222222222, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323997, Length=108, Percent_Identity=34.2592592592593, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321050, Length=108, Percent_Identity=34.2592592592593, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319957, Length=108, Percent_Identity=34.2592592592593, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322616, Length=108, Percent_Identity=34.2592592592593, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 66090; Mature: 66090
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFIFYFVIVFSLLFLWEMTSRHRPTFSFFCPPPSSIASSTLQSLPLLLTSAWHTLKA CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ILGGFFLAITLSIVLATIMLSYKSAKDLLQPLFILLQCTPMFALAPLIVLWFGWGIGAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH VPTALTIFFPLTLTIYQGILSTPEELIEQFVLCGATKFQLLIKLRIPHALPHIFSGLKIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHEEEECCCHHHHHHHCCCEEE IGSAGFAAIAGEWVASQSGLGILMLESRRNYEMELAFAGLATLSILTLSLFQITLLIEKL ECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IFSLFRVKRMSLKHKSVAKKALSVLALIPIMLIPWKGNSKSPPDKKNLTSLTLLLDWTPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCC PNHIPLYAGVAKGYFKQHGLDLQLQKNTDSSSAVPHVLFEQVDMALYHALGIMKTSIKGM CCCEEEEHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PIQIVGRLIDSSLQGFLYRSQDPIYKFEDLNGKVLGFCLNNSRDLNRLLETLNRNGVVPS HHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCHH EVKNVSSDLISPMLLNKIDFLYGAFYNIEGVKLQTLGMPVKCFLSDTCDLPTGPQLIVFT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHCCCCCCCCCCCEEEEEE KKGTKASEPEIVEAFQKALQESIIFSKDHPEDAFKLYAKETKSIPKNLYQEYLQWEETFP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LLAQSQDPLSKDLVDKLLETIIKRYPELASEVAKFSLNDLYNPSLPEEQSV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKKKFIFYFVIVFSLLFLWEMTSRHRPTFSFFCPPPSSIASSTLQSLPLLLTSAWHTLKA CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ILGGFFLAITLSIVLATIMLSYKSAKDLLQPLFILLQCTPMFALAPLIVLWFGWGIGAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH VPTALTIFFPLTLTIYQGILSTPEELIEQFVLCGATKFQLLIKLRIPHALPHIFSGLKIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHEEEECCCHHHHHHHCCCEEE IGSAGFAAIAGEWVASQSGLGILMLESRRNYEMELAFAGLATLSILTLSLFQITLLIEKL ECCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IFSLFRVKRMSLKHKSVAKKALSVLALIPIMLIPWKGNSKSPPDKKNLTSLTLLLDWTPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCC PNHIPLYAGVAKGYFKQHGLDLQLQKNTDSSSAVPHVLFEQVDMALYHALGIMKTSIKGM CCCEEEEHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PIQIVGRLIDSSLQGFLYRSQDPIYKFEDLNGKVLGFCLNNSRDLNRLLETLNRNGVVPS HHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCHH EVKNVSSDLISPMLLNKIDFLYGAFYNIEGVKLQTLGMPVKCFLSDTCDLPTGPQLIVFT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHCCCCCCCCCCCEEEEEE KKGTKASEPEIVEAFQKALQESIIFSKDHPEDAFKLYAKETKSIPKNLYQEYLQWEETFP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LLAQSQDPLSKDLVDKLLETIIKRYPELASEVAKFSLNDLYNPSLPEEQSV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]