Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15836541

GI number: 15836541

Start: 1155470

End: 1156078

Strand: Reverse

Name: Not Available

Synonym: CPj1010

Alternate gene names: 15836541

Gene position: 1156078-1155470 (Counterclockwise)

Preceding gene: 15836542

Following gene: 15836540

Centisome position: 94.25

GC content: 41.05

Gene sequence:

>609_bases
ATGCTCATCTTACTCAATCTTAGCCTACTATTTTATGTCCTGTTCGATTCTCCAGGCTCCATTCCTGTCTTTGTTGCTTT
GCTCAAAAACTTTTCTAGAAAGAAACAACAACGGGTGATCCTAAGAGAATGCCTTTTTGCTCTCGGAGCCCTCATCCTCT
TCGTTACTTTTGGAAGAAGCTTCTTCCAATTCTTGGATATTTCTCTCTACGCTTTTCAGATCATAGGCGGCTTTCTCCTC
TTTACAGTCTCTATAAAAATGATGCTGGCACCCATGCCAGAAAAAGCTAAAGATGATACTTCCAAAACAGAACCTATATT
TTTCCCCTTAGCTTTCCCAGTAATCACAGGCCCTGCTGTGATTACAGCACTCCTTAGCTACATGGAAGAGGGAATCTACT
CTAGGGAAATTATTTTTACTGCTATGATTATCGCCTGGGCATTTTCTTTATTTACTCTGCTATGCTCTAGCTTCTTTGAC
CGCCTTTCTGGAAATTTCGGACTCCTCGCACTCGAGAGACTCTTCGGTATTGCTTTACTACTTATGTCGGTAAACCTTAT
GTTGAAAGGGATCTCAATAGCGTTTAATATAGGCTTTTACATCGGGTGA

Upstream 100 bases:

>100_bases
TACTCCTAGCTACACAAACCGTTTTAGGACTTTTTGTAACAATTGTGGGTACCCAACTCCTAGTCTCAGGATTACAACAA
GCATTTTTATAGAATAAGTT

Downstream 100 bases:

>100_bases
TCCTTATGAAAAGAAACGACCCTTGCTGGTGCGGCAGTGGACGTAAATGGAAACAGTGCCACTACCCTCAACCCCCAAAA
ATGTCTCCAGAAGCCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLILLNLSLLFYVLFDSPGSIPVFVALLKNFSRKKQQRVILRECLFALGALILFVTFGRSFFQFLDISLYAFQIIGGFLL
FTVSIKMMLAPMPEKAKDDTSKTEPIFFPLAFPVITGPAVITALLSYMEEGIYSREIIFTAMIIAWAFSLFTLLCSSFFD
RLSGNFGLLALERLFGIALLLMSVNLMLKGISIAFNIGFYIG

Sequences:

>Translated_202_residues
MLILLNLSLLFYVLFDSPGSIPVFVALLKNFSRKKQQRVILRECLFALGALILFVTFGRSFFQFLDISLYAFQIIGGFLL
FTVSIKMMLAPMPEKAKDDTSKTEPIFFPLAFPVITGPAVITALLSYMEEGIYSREIIFTAMIIAWAFSLFTLLCSSFFD
RLSGNFGLLALERLFGIALLLMSVNLMLKGISIAFNIGFYIG
>Mature_202_residues
MLILLNLSLLFYVLFDSPGSIPVFVALLKNFSRKKQQRVILRECLFALGALILFVTFGRSFFQFLDISLYAFQIIGGFLL
FTVSIKMMLAPMPEKAKDDTSKTEPIFFPLAFPVITGPAVITALLSYMEEGIYSREIIFTAMIIAWAFSLFTLLCSSFFD
RLSGNFGLLALERLFGIALLLMSVNLMLKGISIAFNIGFYIG

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family

Homologues:

Organism=Escherichia coli, GI1789842, Length=190, Percent_Identity=30, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1010_CHLPN (Q9Z6P9)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A81533
- PIR:   F72008
- PIR:   G86616
- RefSeq:   NP_225204.1
- RefSeq:   NP_301065.1
- RefSeq:   NP_445381.1
- RefSeq:   NP_877320.1
- GeneID:   1467727
- GeneID:   895067
- GeneID:   919780
- GeneID:   963072
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0843
- KEGG:   cpj:CPj1010
- KEGG:   cpn:CPn1010
- KEGG:   cpt:CpB1048
- TIGR:   CP_0843
- HOGENOM:   HBG731519
- OMA:   FLFAGEA
- PhylomeDB:   Q9Z6P9
- ProtClustDB:   CLSK871633
- BioCyc:   CPNE115711:CP_0843-MONOMER
- BioCyc:   CPNE115713:CPN1010-MONOMER
- BioCyc:   CPNE138677:CPJ1010-MONOMER
- BioCyc:   CPNE182082:CPB1048-MONOMER
- InterPro:   IPR002771

Pfam domain/function: PF01914 MarC

EC number: NA

Molecular weight: Translated: 22653; Mature: 22653

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdd79530)-; HASH(0xddbe914)-; HASH(0xdcbd674)-; HASH(0xd60829c)-; HASH(0xd98528c)-; HASH(0xada11c8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILLNLSLLFYVLFDSPGSIPVFVALLKNFSRKKQQRVILRECLFALGALILFVTFGRS
CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQFLDISLYAFQIIGGFLLFTVSIKMMLAPMPEKAKDDTSKTEPIFFPLAFPVITGPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
ITALLSYMEEGIYSREIIFTAMIIAWAFSLFTLLCSSFFDRLSGNFGLLALERLFGIALL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LMSVNLMLKGISIAFNIGFYIG
HHHHHHHHHHHHHEEEECEECH
>Mature Secondary Structure
MLILLNLSLLFYVLFDSPGSIPVFVALLKNFSRKKQQRVILRECLFALGALILFVTFGRS
CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFQFLDISLYAFQIIGGFLLFTVSIKMMLAPMPEKAKDDTSKTEPIFFPLAFPVITGPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
ITALLSYMEEGIYSREIIFTAMIIAWAFSLFTLLCSSFFDRLSGNFGLLALERLFGIALL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LMSVNLMLKGISIAFNIGFYIG
HHHHHHHHHHHHHEEEECEECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362