| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
Click here to switch to the map view.
The map label for this gene is rpmJ
Identifier: 15836469
GI number: 15836469
Start: 1068685
End: 1068822
Strand: Direct
Name: rpmJ
Synonym: CPj0936
Alternate gene names: 15836469
Gene position: 1068685-1068822 (Clockwise)
Preceding gene: 15836466
Following gene: 15836470
Centisome position: 87.13
GC content: 39.86
Gene sequence:
>138_bases ATGAAAGTTAGTTCATCTGTTAAGGCTGATCCATCTAAGGGGGACAAATTAGTCCGCCGTAAAGGACGTCTTTATGTAAT TAATAAGAAAGATCCAAATCGAAAGCAGCGCCAAGCAGGACCTGCACGTAAAAAATAA
Upstream 100 bases:
>100_bases ACAGTCTGGTATTGTCAAAAAAGCTCCTAGGAGATTAAATTGGTTCCTTGTTGTAACTTAGTATGCTTCTCCTTTTTATG AGAAGTGAAGGTAATATCTC
Downstream 100 bases:
>100_bases TTTAAAAATTTAGGTAAAACGCATGGCGAAAAAATCATCAGTAGCAAGAGAAGCTAAGCGTCGACGATTGGTAGAGGCTA ATTTTAAAAAACGATCCGAC
Product: 50S ribosomal protein L36
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MKVSSSVKADPSKGDKLVRRKGRLYVINKKDPNRKQRQAGPARKK
Sequences:
>Translated_45_residues MKVSSSVKADPSKGDKLVRRKGRLYVINKKDPNRKQRQAGPARKK >Mature_45_residues MKVSSSVKADPSKGDKLVRRKGRLYVINKKDPNRKQRQAGPARKK
Specific function: Unknown
COG id: COG0257
COG function: function code J; Ribosomal protein L36
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L36P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000473 [H]
Pfam domain/function: PF00444 Ribosomal_L36 [H]
EC number: NA
Molecular weight: Translated: 5121; Mature: 5121
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSSSVKADPSKGDKLVRRKGRLYVINKKDPNRKQRQAGPARKK CCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHCCCCCCC >Mature Secondary Structure MKVSSSVKADPSKGDKLVRRKGRLYVINKKDPNRKQRQAGPARKK CCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA