| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836461
GI number: 15836461
Start: 1059229
End: 1060356
Strand: Reverse
Name: Not Available
Synonym: CPj0928
Alternate gene names: NA
Gene position: 1060356-1059229 (Counterclockwise)
Preceding gene: 15836462
Following gene: 15836460
Centisome position: 86.45
GC content: 41.4
Gene sequence:
>1128_bases TTGAATCTTTCAAACAGGTCTGATATTTTGTCAGGAATATTTTCAAATCCTCATCCAGTTTCCTATTTTTCGTCAACACA CGCCAAGCAGTTAAGTGACTTTAGTAAGAAGCACCCCATACTCACCAAAATTGTTACGATCATTGTTAAAATTTTCAAAC TCTTAATCGGTCTGATTATTCCGCCCCTGGGAATTTATTGGTTATGTCAATTAGTATGTTCCTTGGCTCTTTTCCCCCGT TCTTCGATGCTTTACAGCGTCTTGAAAACCTGCTTTAAAAAGTATCGTTTGGAACAGGAAATACAAGATTATTTTGTAAA GAATCTAGATCCCTCTTTCAAAGACCCAGCAGTCTCGGAAAGTAAAAGAATCACGATCCAACAAGACCATCTTACCATTG ATACTTTAGCAATACATTTCAGTACGGCAAGGCCTAAACGTTGGCTGCTGATTTCTCTAGGAAGTGGAGATTTCCTCGAA GACATGATAGGCCTGAAAGATTCCTTGTTTCTCTCCTGGAAAGAGTTAGCTAAACTGCTAGGCGCTAATATCCTAATTTA CAACTATCCTGGGGTTAAGTCGAGCACAGGAAAATTGAACTTAGAGAACCTAGCGACAGCTCATAATCTATGTGCAAAGT ACCTACAAGATAAAATTCAGGGCCCTGGGGCTAACGAAATCATCACCTACGGATATTCCTTAGGAGGGGTAGTCCAGTCT GCAGCTTTGCAAAAAAATCCTTTTACAAATAGCGAGACTTCTTGGGTAGCAGTCAAAGACCGTGCTCCCCACTCTTTACC CGCAGCTGCTAATAGTTTCTTCGGGCCAATAGGAAAACTCATCGCAGTCCTCGCTCGATGGAAAATGGATGCGGAAAAAA ACAGCCGAGAGCTTCCTTGCCCAGAAATTCTTGTTTATTCTGCGGATCGATTTCGCCCTTCAGAAGTTGGTGATGATACC GCATTGCTCCCGGAGTTTACTCTTGCTCATGCAATAAAACGAACCCCATTTGCCAGGAGTAAAAAATTTATAGGAGAGGT AAATCTACTCCACTCAAGCCCTCTGAAACACCCTACAATACAAAAGCTTGCTGAAGCAATCCTTGAGAGTCTCTCTAGAA AAAATTAA
Upstream 100 bases:
>100_bases TATAAGCGCGAAAAACAGCCGCCGATAACACTGAACTTTGTTTGACCTGACGTCCCCAGTCCCTTGAGATTAGAGACGTA AGGATTTCGCATTCACTCTT
Downstream 100 bases:
>100_bases AAAATTATAATGCGTATTCTTTTTCTTCTGTTCTCTTTATACTCTGTGTACCTAAAATTTAGGACTCTTGTATGATCCCA TCCCCTACCCCAATAAACTT
Product: CHLPS 43 kDa protein homolog_3
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNLSNRSDILSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLCQLVCSLALFPR SSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLE DMIGLKDSLFLSWKELAKLLGANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQS AALQKNPFTNSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSADRFRPSEVGDDT ALLPEFTLAHAIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILESLSRKN
Sequences:
>Translated_375_residues MNLSNRSDILSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLCQLVCSLALFPR SSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLE DMIGLKDSLFLSWKELAKLLGANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQS AALQKNPFTNSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSADRFRPSEVGDDT ALLPEFTLAHAIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILESLSRKN >Mature_375_residues MNLSNRSDILSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLIIPPLGIYWLCQLVCSLALFPR SSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSESKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLE DMIGLKDSLFLSWKELAKLLGANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQS AALQKNPFTNSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPCPEILVYSADRFRPSEVGDDT ALLPEFTLAHAIKRTPFARSKKFIGEVNLLHSSPLKHPTIQKLAEAILESLSRKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41841; Mature: 41841
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSNRSDILSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLII CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH PPLGIYWLCQLVCSLALFPRSSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSE CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLEDMIGLKDSLFLSWKELAKLL CCCEEEEECCEEEEHEEEEEECCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHH GANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQS CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH AALQKNPFTNSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPC HHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PEILVYSADRFRPSEVGDDTALLPEFTLAHAIKRTPFARSKKFIGEVNLLHSSPLKHPTI CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH QKLAEAILESLSRKN HHHHHHHHHHHHCCC >Mature Secondary Structure MNLSNRSDILSGIFSNPHPVSYFSSTHAKQLSDFSKKHPILTKIVTIIVKIFKLLIGLII CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH PPLGIYWLCQLVCSLALFPRSSMLYSVLKTCFKKYRLEQEIQDYFVKNLDPSFKDPAVSE CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SKRITIQQDHLTIDTLAIHFSTARPKRWLLISLGSGDFLEDMIGLKDSLFLSWKELAKLL CCCEEEEECCEEEEHEEEEEECCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHH GANILIYNYPGVKSSTGKLNLENLATAHNLCAKYLQDKIQGPGANEIITYGYSLGGVVQS CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH AALQKNPFTNSETSWVAVKDRAPHSLPAAANSFFGPIGKLIAVLARWKMDAEKNSRELPC HHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PEILVYSADRFRPSEVGDDTALLPEFTLAHAIKRTPFARSKKFIGEVNLLHSSPLKHPTI CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH QKLAEAILESLSRKN HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA