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The map label for this gene is nlpD

Identifier: 15836435

GI number: 15836435

Start: 1033864

End: 1034565

Strand: Direct

Name: nlpD

Synonym: CPj0902

Alternate gene names: NA

Gene position: 1033864-1034565 (Clockwise)

Preceding gene: 15836434

Following gene: 15836436

Centisome position: 84.29

GC content: 43.87

Gene sequence:

>702_bases
ATGAATCGTAGAGACATGGTAATAACAGCTGTCGTAGTGAATGCTATATTGCTTGTGGCTCTTTTCGTCACATCAAAGCG
TATTGGCGTCAAGGACTATGACGAGGGATTCCGTAATTTTGCTTCTAGCAAGGTTACACAAGCAGTAGTTTCAGAAGAAA
AAGTCATAGAAAAGCCTGTAGTCGCAGAAGTGCCTAGCCGTCCTATCGCTAAAGAGACTCTAGCTGCACAGTTTATTGAA
AGTAAGCCGGTTATTGTAACCACACCACCCGTGCCTGTTGTTAGCGAAACCCCAGAAGTGCCTACTGTGGCAGTTCCGCC
TCAGCCTGTTCGTGAGACAGTAAAAGAGGAACAAGCTCCTTATGCTACTGTTGTAGTGAAAAAAGGAGATTTTCTCGAAC
GCATTGCGAGAGCAAATCATACTACCGTTGCAAAATTGATGCAGATCAATGATCTTACCACCACCCAACTTAAAATTGGT
CAGGTCATCAAAGTCCCTACGTCTCAAGATGTCAGCAACGAAAAAACTCCTCAAACACAGACCGCAAACCCTGAAAATTA
TTATATCGTCCAAGAAGGGGATAGCCCGTGGACAATAGCATTGCGTAACCATATTCGATTGGATGATTTGCTAAAAATGA
ATGATCTCGATGAATATAAAGCCCGGCGCCTTAAGCCTGGAGATCAGTTGCGCATACGTTGA

Upstream 100 bases:

>100_bases
TGTCTCCAGGATGCGCAAGCTTTGATCAGTTTCAAAGTTTTAAAGAACGCGGAGCTTACTTTAAGCTGTTGATCAGAGAA
ATGCAGGCAGTGAGGTAAAT

Downstream 100 bases:

>100_bases
TCTAAGCAGTCCCTTAGCATGAAATGGTTTGTTATTTCCTGTTTATTAGGAATCTTTTCTCTAGGGCTGATTATGGTTTT
TGATACTTCTTCAGCAGAAG

Product: muramidase

Products: NA

Alternate protein names: LysM Domain-Containing Protein; Lytic Murein Transglycosylase; Muropeptidase; Cell Wall Hydrolase

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNRRDMVITAVVVNAILLVALFVTSKRIGVKDYDEGFRNFASSKVTQAVVSEEKVIEKPVVAEVPSRPIAKETLAAQFIE
SKPVIVTTPPVPVVSETPEVPTVAVPPQPVRETVKEEQAPYATVVVKKGDFLERIARANHTTVAKLMQINDLTTTQLKIG
QVIKVPTSQDVSNEKTPQTQTANPENYYIVQEGDSPWTIALRNHIRLDDLLKMNDLDEYKARRLKPGDQLRIR

Sequences:

>Translated_233_residues
MNRRDMVITAVVVNAILLVALFVTSKRIGVKDYDEGFRNFASSKVTQAVVSEEKVIEKPVVAEVPSRPIAKETLAAQFIE
SKPVIVTTPPVPVVSETPEVPTVAVPPQPVRETVKEEQAPYATVVVKKGDFLERIARANHTTVAKLMQINDLTTTQLKIG
QVIKVPTSQDVSNEKTPQTQTANPENYYIVQEGDSPWTIALRNHIRLDDLLKMNDLDEYKARRLKPGDQLRIR
>Mature_233_residues
MNRRDMVITAVVVNAILLVALFVTSKRIGVKDYDEGFRNFASSKVTQAVVSEEKVIEKPVVAEVPSRPIAKETLAAQFIE
SKPVIVTTPPVPVVSETPEVPTVAVPPQPVRETVKEEQAPYATVVVKKGDFLERIARANHTTVAKLMQINDLTTTQLKIG
QVIKVPTSQDVSNEKTPQTQTANPENYYIVQEGDSPWTIALRNHIRLDDLLKMNDLDEYKARRLKPGDQLRIR

Specific function: Unknown

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26005; Mature: 26005

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRDMVITAVVVNAILLVALFVTSKRIGVKDYDEGFRNFASSKVTQAVVSEEKVIEKPV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VAEVPSRPIAKETLAAQFIESKPVIVTTPPVPVVSETPEVPTVAVPPQPVRETVKEEQAP
HHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCC
YATVVVKKGDFLERIARANHTTVAKLMQINDLTTTQLKIGQVIKVPTSQDVSNEKTPQTQ
EEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCCCCCCC
TANPENYYIVQEGDSPWTIALRNHIRLDDLLKMNDLDEYKARRLKPGDQLRIR
CCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHCCCCCCEECC
>Mature Secondary Structure
MNRRDMVITAVVVNAILLVALFVTSKRIGVKDYDEGFRNFASSKVTQAVVSEEKVIEKPV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VAEVPSRPIAKETLAAQFIESKPVIVTTPPVPVVSETPEVPTVAVPPQPVRETVKEEQAP
HHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCC
YATVVVKKGDFLERIARANHTTVAKLMQINDLTTTQLKIGQVIKVPTSQDVSNEKTPQTQ
EEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCCCCCCC
TANPENYYIVQEGDSPWTIALRNHIRLDDLLKMNDLDEYKARRLKPGDQLRIR
CCCCCEEEEEECCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA