Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836354

GI number: 15836354

Start: 928988

End: 929992

Strand: Direct

Name: Not Available

Synonym: CPj0821

Alternate gene names: NA

Gene position: 928988-929992 (Clockwise)

Preceding gene: 15836353

Following gene: 15836355

Centisome position: 75.74

GC content: 42.19

Gene sequence:

>1005_bases
ATGCAACCTTTTATCTTTACTTTACTGTGCTTGACATCTTTGGTTTCTTTAGTCGCCTTTGATGCTGCGAATGCTCGTAA
ACGTTGTGCCTGTGCTCAAACTATAGAACGTGGAGAGAACTTCTTTTCCATAAAACGCTCTGCTTGTGCTGAAATCGAAT
ATCAAGAAAAATCTCGCCACGCCTCAGCAATTGAAAGAATCTCAAAAGATAAAGGCAAAGTCACTCCAAAGCAGATTGCG
AAAGTAGCTACTAAGAAAAAGCAAAGATACCGTTTATTGCAGGTTCCTTTTTCAAGGCCTCCGAATAACTCAAGGTATAA
CCTCTATGCTTTGCTTAGTGAACCTCCCGAATGCTATAGCGATACAGCATCATGGTATGCTATTTTTATTCGGTTACTTC
GACGTGCTTATGTAGACACGGGAAATGTACCTCCTGGATCTGAGTATGCCATCGCTAATGCTTTGATAAGTAACAAACAA
GAGATTTTAGAGAGGGGAGCGCAGCTTGGACCCGATGTTATTGAAACTCTAACATTGCCTGAGGAACAAGCCGAGATTTT
TTATAAAATGCTCAAAGGGTCGTCAAACTCTCAGTCGCTACTGAATTTTCTGCATTATGAAGAGAAAAGCTTAGGCCACT
GTAAGCTAAATCTGATCTTCATGGATCCCCTACTGTTAGAAGCTGTTCTAGATCATCCCGATGCTTATAGGGAAACGTCG
CTCCTGCGCGATGGCATTTGGGAAGCGGTGAAGCGTCAAGAACATGCCATCCAAGAACATGGCCAGGCAGCTGCTTTGGA
GCTTTTTAAAACACGCACCGACTTCCGCCTGGAGCTGCGAGATAAGATGCAGTTACTTCTAAGTCGATACGATTTGCTCC
CCTTATTAAATAAAAAAATGTTCGACTACACCTTAGGAAGTGCCGGAGATTACTTATTTTTGGTAGACCCAGATACTAAG
GCAATTTCTCGATGTCGCTGCCCTTCAAAGAGTATTAAATTATAA

Upstream 100 bases:

>100_bases
GAAAAACTTCCTGAAACAATTGCTTTAACTATAACACGGGAACCTAAAGCATATCCTCCAAGGACGTTAACATACCAATT
TGCGGTTGGGAAATAAGCCT

Downstream 100 bases:

>100_bases
TTTAATTTTAATATTTATTTTAAATAGTTTTTTTTGATAATTGTCTTAATAAGTACTATAAAAAATATTTCTATAGGTAG
GACCATGGCAGACGAGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQPFIFTLLCLTSLVSLVAFDAANARKRCACAQTIERGENFFSIKRSACAEIEYQEKSRHASAIERISKDKGKVTPKQIA
KVATKKKQRYRLLQVPFSRPPNNSRYNLYALLSEPPECYSDTASWYAIFIRLLRRAYVDTGNVPPGSEYAIANALISNKQ
EILERGAQLGPDVIETLTLPEEQAEIFYKMLKGSSNSQSLLNFLHYEEKSLGHCKLNLIFMDPLLLEAVLDHPDAYRETS
LLRDGIWEAVKRQEHAIQEHGQAAALELFKTRTDFRLELRDKMQLLLSRYDLLPLLNKKMFDYTLGSAGDYLFLVDPDTK
AISRCRCPSKSIKL

Sequences:

>Translated_334_residues
MQPFIFTLLCLTSLVSLVAFDAANARKRCACAQTIERGENFFSIKRSACAEIEYQEKSRHASAIERISKDKGKVTPKQIA
KVATKKKQRYRLLQVPFSRPPNNSRYNLYALLSEPPECYSDTASWYAIFIRLLRRAYVDTGNVPPGSEYAIANALISNKQ
EILERGAQLGPDVIETLTLPEEQAEIFYKMLKGSSNSQSLLNFLHYEEKSLGHCKLNLIFMDPLLLEAVLDHPDAYRETS
LLRDGIWEAVKRQEHAIQEHGQAAALELFKTRTDFRLELRDKMQLLLSRYDLLPLLNKKMFDYTLGSAGDYLFLVDPDTK
AISRCRCPSKSIKL
>Mature_334_residues
MQPFIFTLLCLTSLVSLVAFDAANARKRCACAQTIERGENFFSIKRSACAEIEYQEKSRHASAIERISKDKGKVTPKQIA
KVATKKKQRYRLLQVPFSRPPNNSRYNLYALLSEPPECYSDTASWYAIFIRLLRRAYVDTGNVPPGSEYAIANALISNKQ
EILERGAQLGPDVIETLTLPEEQAEIFYKMLKGSSNSQSLLNFLHYEEKSLGHCKLNLIFMDPLLLEAVLDHPDAYRETS
LLRDGIWEAVKRQEHAIQEHGQAAALELFKTRTDFRLELRDKMQLLLSRYDLLPLLNKKMFDYTLGSAGDYLFLVDPDTK
AISRCRCPSKSIKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38107; Mature: 38107

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPFIFTLLCLTSLVSLVAFDAANARKRCACAQTIERGENFFSIKRSACAEIEYQEKSRH
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHH
ASAIERISKDKGKVTPKQIAKVATKKKQRYRLLQVPFSRPPNNSRYNLYALLSEPPECYS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCHHHH
DTASWYAIFIRLLRRAYVDTGNVPPGSEYAIANALISNKQEILERGAQLGPDVIETLTLP
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHCCC
EEQAEIFYKMLKGSSNSQSLLNFLHYEEKSLGHCKLNLIFMDPLLLEAVLDHPDAYRETS
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHH
LLRDGIWEAVKRQEHAIQEHGQAAALELFKTRTDFRLELRDKMQLLLSRYDLLPLLNKKM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FDYTLGSAGDYLFLVDPDTKAISRCRCPSKSIKL
HHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQPFIFTLLCLTSLVSLVAFDAANARKRCACAQTIERGENFFSIKRSACAEIEYQEKSRH
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHH
ASAIERISKDKGKVTPKQIAKVATKKKQRYRLLQVPFSRPPNNSRYNLYALLSEPPECYS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCHHHH
DTASWYAIFIRLLRRAYVDTGNVPPGSEYAIANALISNKQEILERGAQLGPDVIETLTLP
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHCCC
EEQAEIFYKMLKGSSNSQSLLNFLHYEEKSLGHCKLNLIFMDPLLLEAVLDHPDAYRETS
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHH
LLRDGIWEAVKRQEHAIQEHGQAAALELFKTRTDFRLELRDKMQLLLSRYDLLPLLNKKM
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FDYTLGSAGDYLFLVDPDTKAISRCRCPSKSIKL
HHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA