Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836327

GI number: 15836327

Start: 896495

End: 897328

Strand: Direct

Name: Not Available

Synonym: CPj0794

Alternate gene names: NA

Gene position: 896495-897328 (Clockwise)

Preceding gene: 15836323

Following gene: 15836328

Centisome position: 73.09

GC content: 43.88

Gene sequence:

>834_bases
GTGAGTCTATATCAAAAATGGTGGAACAGTCAGTTAAAGAAGAGCCTCTGCTATTCGACTGTTGCTGCTCTAATATTTAT
GATTCCTTCTCAAGAATCCTTTGCAGATAGTCTTATAGATTTAAATTTAGGTTTAGATCCTTCGGTCGAATGTCTGTCAG
GAGATGGTGCATTTTCTGTTGGGTATTTTACTAAGGCGGGATCGACTCCCGTAGAATATCAGCCGTTTAAATACGACGTA
TCTAAGAAGACATTCACAATCCTTTCCGTAGAAACGGCAAATCAGAGCGGCTATGCTTACGGAATCTCCTACGATGGCAC
GATCACTGTAGGAACGTGTAGCCTAGGTGCAGGAAAATATAACGGCGCAAAATGGAGTGCGGATGGCACTTTAACACCCT
TAACTGGAATCACGGGGGGGACGTCACATACGGAAGCGCGTGCGATTTCTAAGGATACTCAGGTGATCGAGGGTTTCTCA
TATGATGCTTCAGGGCAACCCAAGGCTGTGCAGTGGGCAAGCGGAGCGACTACAGTAACACAATTAGCAGATATTTCAGG
AGGCTCTAGAAGCTCTTATGCGTATGCTATATCTGATGATGGCACGATTATTGTTGGGTCTATGGAGAGCACGATAACAA
GGAAAACTACAGCTGTAAAATGGGTAAATAATGTTCCTACGTATCTGGGAACCTTAGGAGGAGATGCTTCTACAGGTCTT
TATATTTCTGGAGACGGCACCGTGATTGTAGGTGCGGCAAATACAGCAACTGTAACCAATGGGAATCAGGAATCCCACGC
CTATATGTATAAAGATAACCAAATGAAAGATTGA

Upstream 100 bases:

>100_bases
CAATAAAAATTGTTAAAGCTTTTGTTTTTTACTCACAATACTTATGTAGAAATCTTCTAAACACAGAAGCTTTCTACTAA
AAAAGAGCGGAGGGAATCAA

Downstream 100 bases:

>100_bases
GGAACTTTAGGAGGGGCGAATTCTTCAGCAACTGGAGTTTCTTCAGACGGTTCTGTGATTGTTGGTCAGGCGCAGACAGC
CGATAAATCCGTGCATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSLYQKWWNSQLKKSLCYSTVAALIFMIPSQESFADSLIDLNLGLDPSVECLSGDGAFSVGYFTKAGSTPVEYQPFKYDV
SKKTFTILSVETANQSGYAYGISYDGTITVGTCSLGAGKYNGAKWSADGTLTPLTGITGGTSHTEARAISKDTQVIEGFS
YDASGQPKAVQWASGATTVTQLADISGGSRSSYAYAISDDGTIIVGSMESTITRKTTAVKWVNNVPTYLGTLGGDASTGL
YISGDGTVIVGAANTATVTNGNQESHAYMYKDNQMKD

Sequences:

>Translated_277_residues
MSLYQKWWNSQLKKSLCYSTVAALIFMIPSQESFADSLIDLNLGLDPSVECLSGDGAFSVGYFTKAGSTPVEYQPFKYDV
SKKTFTILSVETANQSGYAYGISYDGTITVGTCSLGAGKYNGAKWSADGTLTPLTGITGGTSHTEARAISKDTQVIEGFS
YDASGQPKAVQWASGATTVTQLADISGGSRSSYAYAISDDGTIIVGSMESTITRKTTAVKWVNNVPTYLGTLGGDASTGL
YISGDGTVIVGAANTATVTNGNQESHAYMYKDNQMKD
>Mature_276_residues
SLYQKWWNSQLKKSLCYSTVAALIFMIPSQESFADSLIDLNLGLDPSVECLSGDGAFSVGYFTKAGSTPVEYQPFKYDVS
KKTFTILSVETANQSGYAYGISYDGTITVGTCSLGAGKYNGAKWSADGTLTPLTGITGGTSHTEARAISKDTQVIEGFSY
DASGQPKAVQWASGATTVTQLADISGGSRSSYAYAISDDGTIIVGSMESTITRKTTAVKWVNNVPTYLGTLGGDASTGLY
ISGDGTVIVGAANTATVTNGNQESHAYMYKDNQMKD

Specific function: Unknown

COG id: COG5563

COG function: function code S; Predicted integral membrane proteins containing uncharacterized repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29212; Mature: 29080

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYQKWWNSQLKKSLCYSTVAALIFMIPSQESFADSLIDLNLGLDPSVECLSGDGAFSV
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHEEEEECCCCCCCEEECCCCCEEE
GYFTKAGSTPVEYQPFKYDVSKKTFTILSVETANQSGYAYGISYDGTITVGTCSLGAGKY
EEEECCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCC
NGAKWSADGTLTPLTGITGGTSHTEARAISKDTQVIEGFSYDASGQPKAVQWASGATTVT
CCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCEEH
QLADISGGSRSSYAYAISDDGTIIVGSMESTITRKTTAVKWVNNVPTYLGTLGGDASTGL
HHHHCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCE
YISGDGTVIVGAANTATVTNGNQESHAYMYKDNQMKD
EECCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SLYQKWWNSQLKKSLCYSTVAALIFMIPSQESFADSLIDLNLGLDPSVECLSGDGAFSV
CHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHEEEEECCCCCCCEEECCCCCEEE
GYFTKAGSTPVEYQPFKYDVSKKTFTILSVETANQSGYAYGISYDGTITVGTCSLGAGKY
EEEECCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCC
NGAKWSADGTLTPLTGITGGTSHTEARAISKDTQVIEGFSYDASGQPKAVQWASGATTVT
CCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCEEH
QLADISGGSRSSYAYAISDDGTIIVGSMESTITRKTTAVKWVNNVPTYLGTLGGDASTGL
HHHHCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHEEEECCCCCHHHHHCCCCCCCCE
YISGDGTVIVGAANTATVTNGNQESHAYMYKDNQMKD
EECCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA