| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836294
GI number: 15836294
Start: 857025
End: 857699
Strand: Direct
Name: Not Available
Synonym: CPj0761
Alternate gene names: NA
Gene position: 857025-857699 (Clockwise)
Preceding gene: 15836293
Following gene: 15836300
Centisome position: 69.87
GC content: 38.81
Gene sequence:
>675_bases ATGACATCCTGGATAGAATTACTTGATAAGCAAATTGAAGATCAACATATGTTAAAGCACGAATTTTATCAGCGTTGGTC TGAAGGAAAGTTAGAAAAACAACAACTTCAAGCTTATGCCAAAGATTACTATTTACATATTAAAGCATTTCCTTGTTACC TTTCAGCGCTGCATGCTCGCTGTGATGACTTGCAGATTCGTAGACAAATTCTTGAGAATCTCATGGATGAAGAAGCTGGA AATCCTAATCACATAGATTTATGGAGACAGTTTGCTTTATCTCTTGGAGTTTCTGAAGAGGAGCTTGCCAATCATGAATT CAGTCAGGCTGCTCAAGATATGGTAGCGACATTTCGCCGCTTATGCGACATGCCACAACTTGCCGTGGGTTTAGGCGCTC TCTATACTTATGAGATTCAGATTCCTCAAGTCTGTGTAGAGAAAATCCGTGGTTTGAAAGAATATTTTGGAGTTTCTGCT CGAGGCTATGCATACTTTACTGTACATCAAGAAGCTGATATTAAACATGCCAGCGAAGAGAAAGAAATGCTACAAACTTT GGTAGGCAGAGAGAATCCTGATGCTGTTTTGCAAGGATCACAAGAAGTTTTAGATACTCTATGGAACTTTTTGAGCTCTT TTATTAATTCAACGGAGCCTTGTTCTTGTAAGTAG
Upstream 100 bases:
>100_bases AGATATGAGCACTTTAGCAATCGCTGAGGATGAAGATTTATATGGTCCTCTGCTACAATCTATGGCATGGGAAACTCCCG CACCAACCTCCTGAGGTATT
Downstream 100 bases:
>100_bases TATCTTGGCAGGTCTAGAATTTTTGGATCTTATTAGCTTAAAAAATAGGATCATGCATCTGTAAACAGAATCCCCCCTCC TAAAGTATTAGAAGGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Chlamydia protein associating with death domains; CADD
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTSWIELLDKQIEDQHMLKHEFYQRWSEGKLEKQQLQAYAKDYYLHIKAFPCYLSALHARCDDLQIRRQILENLMDEEAG NPNHIDLWRQFALSLGVSEEELANHEFSQAAQDMVATFRRLCDMPQLAVGLGALYTYEIQIPQVCVEKIRGLKEYFGVSA RGYAYFTVHQEADIKHASEEKEMLQTLVGRENPDAVLQGSQEVLDTLWNFLSSFINSTEPCSCK
Sequences:
>Translated_224_residues MTSWIELLDKQIEDQHMLKHEFYQRWSEGKLEKQQLQAYAKDYYLHIKAFPCYLSALHARCDDLQIRRQILENLMDEEAG NPNHIDLWRQFALSLGVSEEELANHEFSQAAQDMVATFRRLCDMPQLAVGLGALYTYEIQIPQVCVEKIRGLKEYFGVSA RGYAYFTVHQEADIKHASEEKEMLQTLVGRENPDAVLQGSQEVLDTLWNFLSSFINSTEPCSCK >Mature_223_residues TSWIELLDKQIEDQHMLKHEFYQRWSEGKLEKQQLQAYAKDYYLHIKAFPCYLSALHARCDDLQIRRQILENLMDEEAGN PNHIDLWRQFALSLGVSEEELANHEFSQAAQDMVATFRRLCDMPQLAVGLGALYTYEIQIPQVCVEKIRGLKEYFGVSAR GYAYFTVHQEADIKHASEEKEMLQTLVGRENPDAVLQGSQEVLDTLWNFLSSFINSTEPCSCK
Specific function: Chlamydia specific toxin inducing apoptosis in mammalian cell lines
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Secreted. Note=Secreted into the host cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqC family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PQQCL_CHLPN (Q9Z7E5)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: B72040 - PIR: G86585 - RefSeq: NP_224956.1 - RefSeq: NP_300818.1 - RefSeq: NP_445648.1 - RefSeq: NP_877061.1 - ProteinModelPortal: Q9Z7E5 - SMR: Q9Z7E5 - GeneID: 1467468 - GeneID: 894950 - GeneID: 919532 - GeneID: 963600 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP1111 - KEGG: cpj:CPj0761 - KEGG: cpn:CPn0761 - KEGG: cpt:CpB0789 - TIGR: CP_1111 - HOGENOM: HBG293036 - OMA: KGKSANK - ProtClustDB: CLSK871484 - BioCyc: CPNE115711:CP_1111-MONOMER - BioCyc: CPNE115713:CPN0761-MONOMER - BioCyc: CPNE138677:CPJ0761-MONOMER - BioCyc: CPNE182082:CPB0789-MONOMER - GO: GO:0009405 - InterPro: IPR016084 - InterPro: IPR004305 - Gene3D: G3DSA:1.20.910.10
Pfam domain/function: PF03070 TENA_THI-4; SSF48613 Heme_oxygenase
EC number: NA
Molecular weight: Translated: 25972; Mature: 25840
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSWIELLDKQIEDQHMLKHEFYQRWSEGKLEKQQLQAYAKDYYLHIKAFPCYLSALHAR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CDDLQIRRQILENLMDEEAGNPNHIDLWRQFALSLGVSEEELANHEFSQAAQDMVATFRR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LCDMPQLAVGLGALYTYEIQIPQVCVEKIRGLKEYFGVSARGYAYFTVHQEADIKHASEE HHCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH KEMLQTLVGRENPDAVLQGSQEVLDTLWNFLSSFINSTEPCSCK HHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TSWIELLDKQIEDQHMLKHEFYQRWSEGKLEKQQLQAYAKDYYLHIKAFPCYLSALHAR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CDDLQIRRQILENLMDEEAGNPNHIDLWRQFALSLGVSEEELANHEFSQAAQDMVATFRR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LCDMPQLAVGLGALYTYEIQIPQVCVEKIRGLKEYFGVSARGYAYFTVHQEADIKHASEE HHCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH KEMLQTLVGRENPDAVLQGSQEVLDTLWNFLSSFINSTEPCSCK HHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362