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The map label for this gene is ompA

Identifier: 15836227

GI number: 15836227

Start: 779537

End: 780706

Strand: Direct

Name: ompA

Synonym: CPj0695

Alternate gene names: 15836227

Gene position: 779537-780706 (Clockwise)

Preceding gene: 15836220

Following gene: 15836228

Centisome position: 63.55

GC content: 42.82

Gene sequence:

>1170_bases
ATGAAAAAACTCTTAAAGTCGGCGTTATTATCCGCCGCATTTGCTGGTTCTGTCGGCTCCTTACAAGCCTTGCCTGTAGG
GAACCCTTCTGATCCAAGCTTATTAATTGATGGTACAATATGGGAAGGTGCTGCAGGAGATCCTTGCGATCCTTGCGCTA
CTTGGTGCGACGCTATTAGCTTACGTGCTGGATTTTACGGAGACTATGTTTTCGACCGTATCTTAAAAGTAGATGCACCT
AAAACATTTTCTATGGGAGCCAAGCCTACTGGATCCGCTGCTGCAAACTATACTACTGCCGTAGATAGACCTAACCCGGC
CTACAATAAGCATTTACACGATGCAGAGTGGTTCACTAATGCAGGCTTCATTGCCTTAAACATTTGGGATCGCTTTGATG
TTTTCTGTACTTTAGGAGCTTCTAATGGTTACATTAGAGGAAACTCTACAGCGTTCAATCTCGTTGGTTTATTCGGAGTT
AAAGGTACTACTGTAAATGCAAATGAACTACCAAACGTTTCTTTAAGTAACGGAGTTGTTGAACTTTACACAGACACCTC
TTTCTCTTGGAGCGTAGGCGCTCGTGGAGCCTTATGGGAATGCGGTTGTGCAACTTTGGGAGCTGAATTCCAATATGCAC
AGTCCAAACCTAAAGTTGAAGAACTTAATGTGATCTGTAACGTATCGCAATTCTCTGTAAACAAACCCAAGGGCTATAAA
GGCGTTGCTTTCCCCTTGCCAACAGACGCTGGCGTAGCAACAGCTACTGGAACAAAGTCTGCGACCATCAATTATCATGA
ATGGCAAGTAGGAGCCTCTCTATCTTACAGACTAAACTCTTTAGTGCCATACATTGGAGTACAATGGTCTCGAGCAACTT
TTGATGCTGATAACATCCGCATTGCTCAGCCAAAACTACCTACAGCTGTTTTAAACTTAACTGCATGGAACCCTTCTTTA
CTAGGAAATGCCACAGCATTGTCTACTACTGATTCGTTCTCAGACTTCATGCAAATTGTTTCCTGTCAGATCAACAAGTT
TAAATCTAGAAAAGCTTGTGGAGTTACTGTAGGAGCTACTTTAGTTGATGCTGATAAATGGTCACTTACTGCAGAAGCTC
GTTTAATTAACGAGAGAGCTGCTCACGTATCTGGTCAGTTCAGATTCTAA

Upstream 100 bases:

>100_bases
GATATCTTGTCTGGCTTTAATTTGGACGTCGTGTCGCCAAAATATGAGTAATAGCGAGCACATAAATAAAAGATACTAAG
CATAATCTTTAGAGGTGAGT

Downstream 100 bases:

>100_bases
AGATTTGCTTAGAATTTCTCCTCACCTTGTTATCAGAGTCTACATGTTAGGCTCTGATTTATGCTCAGAGCTTCTTAATT
TCTGAGCAATTTTTATTCCC

Product: major outer membrane protein

Products: NA

Alternate protein names: MOMP [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKKLLKSALLSAAFAGSVGSLQALPVGNPSDPSLLIDGTIWEGAAGDPCDPCATWCDAISLRAGFYGDYVFDRILKVDAP
KTFSMGAKPTGSAAANYTTAVDRPNPAYNKHLHDAEWFTNAGFIALNIWDRFDVFCTLGASNGYIRGNSTAFNLVGLFGV
KGTTVNANELPNVSLSNGVVELYTDTSFSWSVGARGALWECGCATLGAEFQYAQSKPKVEELNVICNVSQFSVNKPKGYK
GVAFPLPTDAGVATATGTKSATINYHEWQVGASLSYRLNSLVPYIGVQWSRATFDADNIRIAQPKLPTAVLNLTAWNPSL
LGNATALSTTDSFSDFMQIVSCQINKFKSRKACGVTVGATLVDADKWSLTAEARLINERAAHVSGQFRF

Sequences:

>Translated_389_residues
MKKLLKSALLSAAFAGSVGSLQALPVGNPSDPSLLIDGTIWEGAAGDPCDPCATWCDAISLRAGFYGDYVFDRILKVDAP
KTFSMGAKPTGSAAANYTTAVDRPNPAYNKHLHDAEWFTNAGFIALNIWDRFDVFCTLGASNGYIRGNSTAFNLVGLFGV
KGTTVNANELPNVSLSNGVVELYTDTSFSWSVGARGALWECGCATLGAEFQYAQSKPKVEELNVICNVSQFSVNKPKGYK
GVAFPLPTDAGVATATGTKSATINYHEWQVGASLSYRLNSLVPYIGVQWSRATFDADNIRIAQPKLPTAVLNLTAWNPSL
LGNATALSTTDSFSDFMQIVSCQINKFKSRKACGVTVGATLVDADKWSLTAEARLINERAAHVSGQFRF
>Mature_389_residues
MKKLLKSALLSAAFAGSVGSLQALPVGNPSDPSLLIDGTIWEGAAGDPCDPCATWCDAISLRAGFYGDYVFDRILKVDAP
KTFSMGAKPTGSAAANYTTAVDRPNPAYNKHLHDAEWFTNAGFIALNIWDRFDVFCTLGASNGYIRGNSTAFNLVGLFGV
KGTTVNANELPNVSLSNGVVELYTDTSFSWSVGARGALWECGCATLGAEFQYAQSKPKVEELNVICNVSQFSVNKPKGYK
GVAFPLPTDAGVATATGTKSATINYHEWQVGASLSYRLNSLVPYIGVQWSRATFDADNIRIAQPKLPTAVLNLTAWNPSL
LGNATALSTTDSFSDFMQIVSCQINKFKSRKACGVTVGATLVDADKWSLTAEARLINERAAHVSGQFRF

Specific function: Permits diffusion of specific solutes through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial porin (CP) (TC 1.B.2) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000604 [H]

Pfam domain/function: PF01308 Chlam_OMP [H]

EC number: NA

Molecular weight: Translated: 41620; Mature: 41620

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLKSALLSAAFAGSVGSLQALPVGNPSDPSLLIDGTIWEGAAGDPCDPCATWCDAIS
CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHH
LRAGFYGDYVFDRILKVDAPKTFSMGAKPTGSAAANYTTAVDRPNPAYNKHLHDAEWFTN
HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHCC
AGFIALNIWDRFDVFCTLGASNGYIRGNSTAFNLVGLFGVKGTTVNANELPNVSLSNGVV
CCEEEEEECCCEEEEEEECCCCCEEECCCCEEEEEEEEECCCCEECCCCCCCCCCCCCEE
ELYTDTSFSWSVGARGALWECGCATLGAEFQYAQSKPKVEELNVICNVSQFSVNKPKGYK
EEEECCCEEECCCCCCCEEECCHHHHCCCCHHHCCCCCCEEEEEEEEEHHCCCCCCCCCC
GVAFPLPTDAGVATATGTKSATINYHEWQVGASLSYRLNSLVPYIGVQWSRATFDADNIR
CEEECCCCCCCCEEECCCCCEEEEEEEEEECCCCEEHHHHCCHHHCCEEECEEECCCCEE
IAQPKLPTAVLNLTAWNPSLLGNATALSTTDSFSDFMQIVSCQINKFKSRKACGVTVGAT
EECCCCCEEEEEEECCCHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECEE
LVDADKWSLTAEARLINERAAHVSGQFRF
EEECCCCCEEHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKLLKSALLSAAFAGSVGSLQALPVGNPSDPSLLIDGTIWEGAAGDPCDPCATWCDAIS
CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHH
LRAGFYGDYVFDRILKVDAPKTFSMGAKPTGSAAANYTTAVDRPNPAYNKHLHDAEWFTN
HHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHCC
AGFIALNIWDRFDVFCTLGASNGYIRGNSTAFNLVGLFGVKGTTVNANELPNVSLSNGVV
CCEEEEEECCCEEEEEEECCCCCEEECCCCEEEEEEEEECCCCEECCCCCCCCCCCCCEE
ELYTDTSFSWSVGARGALWECGCATLGAEFQYAQSKPKVEELNVICNVSQFSVNKPKGYK
EEEECCCEEECCCCCCCEEECCHHHHCCCCHHHCCCCCCEEEEEEEEEHHCCCCCCCCCC
GVAFPLPTDAGVATATGTKSATINYHEWQVGASLSYRLNSLVPYIGVQWSRATFDADNIR
CEEECCCCCCCCEEECCCCCEEEEEEEEEECCCCEEHHHHCCHHHCCEEECEEECCCCEE
IAQPKLPTAVLNLTAWNPSLLGNATALSTTDSFSDFMQIVSCQINKFKSRKACGVTVGAT
EECCCCCEEEEEEECCCHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECEE
LVDADKWSLTAEARLINERAAHVSGQFRF
EEECCCCCEEHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125292; 8419295 [H]