| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836127
GI number: 15836127
Start: 684279
End: 685250
Strand: Direct
Name: Not Available
Synonym: CPj0595
Alternate gene names: NA
Gene position: 684279-685250 (Clockwise)
Preceding gene: 15836126
Following gene: 15836128
Centisome position: 55.79
GC content: 42.7
Gene sequence:
>972_bases ATGAAACAATTACTTTTCTGTGTTTGCGTATTTGCTATGTCATGTTCTGCTTACGCATCCCCACGACGACAAGATCCTTC TGTTATGAAGGAAACATTCCGAAATAATTATGGCATTATTGTTTCCGGTCAAGAATGGGTAAAGCGTGGTTCTGACGGCA CCATCACCAAAGTACTCAAAAATGGAGCTACCCTGCATGAAGTTTATTCTGGAGGCCTCCTTCATGGGGAAATTACCTTA ACGTTTCCCCATACCACAGCATTGGACGTTGTTCAAATCTATGATCAAGGTAGACTCGTTTCTCGCAAAACCTTTTTTGT GAACGGTCTTCCATCTCAAGAAGAGCTGTTCAATGAAGATGGCACGTTTGTCCTCACACGATGGCCGGACAACAACGACA GTGATACCATCACAAAGCCTTACTTCATAGAAACGACATATCAAGGGCATGTCATAGAAGGAAGTTATACTTCCTTTAAT GGGAAATACTCCTCATCCATCCACAATGGAGAGGGAGTTCGTTCTGTGTTCTCCTCCAATAACATCCTTCTTTCTGAAGA GACCTTCAATGAAGGTGTCATGGTGAAATATACCACATTCTATCCGAATCGCGATCCCGAATCGATTACTCATTATCAAA ATGGACAGCCTCACGGCTTACGGCTAACATATCTACAAGGTGGCATCCCCAATACGATAGAGGAGTGGCGTTATGGCTTT CAAGACGGAACGACCATCGTATTTAAAAATGGTTGTAAGACATCTGAGATCGCTTATGTTAAGGGAGTGAAAGAAGGTTT AGAACTGCGCTACAATGAACAGGAAATTGTAGCTGAAGAAGTTTCTTGGCGTAATGATTTTCTGCATGGAGAACGTAAGA TCTATGCTGGAGGAATCCAAAAGCATGAATGGTATTACCGCGGGAGATCTGTATCTAAAGCCAAATTCGAGCGGCTAAAT GCTGCAGGATAG
Upstream 100 bases:
>100_bases ATGAGCGAACATTATCTAACCAAGACATTGAAGAAGAATACTGTCGTTTGGTAGCTTTACTTAACGAATTGCTAACAGAC ACTAAAGGGACTATCAATTC
Downstream 100 bases:
>100_bases TTTGCGGTAATGGCTGATGACACCCTCATTCCTAAACTTATGAAGAACTCGCTTTCGCAGGCGTGTTCTGAGGGTTTACT GATTGCTAAGTATCCTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKQLLFCVCVFAMSCSAYASPRRQDPSVMKETFRNNYGIIVSGQEWVKRGSDGTITKVLKNGATLHEVYSGGLLHGEITL TFPHTTALDVVQIYDQGRLVSRKTFFVNGLPSQEELFNEDGTFVLTRWPDNNDSDTITKPYFIETTYQGHVIEGSYTSFN GKYSSSIHNGEGVRSVFSSNNILLSEETFNEGVMVKYTTFYPNRDPESITHYQNGQPHGLRLTYLQGGIPNTIEEWRYGF QDGTTIVFKNGCKTSEIAYVKGVKEGLELRYNEQEIVAEEVSWRNDFLHGERKIYAGGIQKHEWYYRGRSVSKAKFERLN AAG
Sequences:
>Translated_323_residues MKQLLFCVCVFAMSCSAYASPRRQDPSVMKETFRNNYGIIVSGQEWVKRGSDGTITKVLKNGATLHEVYSGGLLHGEITL TFPHTTALDVVQIYDQGRLVSRKTFFVNGLPSQEELFNEDGTFVLTRWPDNNDSDTITKPYFIETTYQGHVIEGSYTSFN GKYSSSIHNGEGVRSVFSSNNILLSEETFNEGVMVKYTTFYPNRDPESITHYQNGQPHGLRLTYLQGGIPNTIEEWRYGF QDGTTIVFKNGCKTSEIAYVKGVKEGLELRYNEQEIVAEEVSWRNDFLHGERKIYAGGIQKHEWYYRGRSVSKAKFERLN AAG >Mature_323_residues MKQLLFCVCVFAMSCSAYASPRRQDPSVMKETFRNNYGIIVSGQEWVKRGSDGTITKVLKNGATLHEVYSGGLLHGEITL TFPHTTALDVVQIYDQGRLVSRKTFFVNGLPSQEELFNEDGTFVLTRWPDNNDSDTITKPYFIETTYQGHVIEGSYTSFN GKYSSSIHNGEGVRSVFSSNNILLSEETFNEGVMVKYTTFYPNRDPESITHYQNGQPHGLRLTYLQGGIPNTIEEWRYGF QDGTTIVFKNGCKTSEIAYVKGVKEGLELRYNEQEIVAEEVSWRNDFLHGERKIYAGGIQKHEWYYRGRSVSKAKFERLN AAG
Specific function: Unknown
COG id: COG2849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36683; Mature: 36683
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLFCVCVFAMSCSAYASPRRQDPSVMKETFRNNYGIIVSGQEWVKRGSDGTITKVLK CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECHHHHHCCCCCHHHHHHH NGATLHEVYSGGLLHGEITLTFPHTTALDVVQIYDQGRLVSRKTFFVNGLPSQEELFNED CCCHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHCCC GTFVLTRWPDNNDSDTITKPYFIETTYQGHVIEGSYTSFNGKYSSSIHNGEGVRSVFSSN CCEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEECCCCCCCCHHHHHHCCC NILLSEETFNEGVMVKYTTFYPNRDPESITHYQNGQPHGLRLTYLQGGIPNTIEEWRYGF CEEEECCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCC QDGTTIVFKNGCKTSEIAYVKGVKEGLELRYNEQEIVAEEVSWRNDFLHGERKIYAGGIQ CCCCEEEEECCCCCCHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHCCCCEEEEECCCC KHEWYYRGRSVSKAKFERLNAAG CCEEEECCCCCCHHHHHHHCCCC >Mature Secondary Structure MKQLLFCVCVFAMSCSAYASPRRQDPSVMKETFRNNYGIIVSGQEWVKRGSDGTITKVLK CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECHHHHHCCCCCHHHHHHH NGATLHEVYSGGLLHGEITLTFPHTTALDVVQIYDQGRLVSRKTFFVNGLPSQEELFNED CCCHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHCCC GTFVLTRWPDNNDSDTITKPYFIETTYQGHVIEGSYTSFNGKYSSSIHNGEGVRSVFSSN CCEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEECCCCCCCCHHHHHHCCC NILLSEETFNEGVMVKYTTFYPNRDPESITHYQNGQPHGLRLTYLQGGIPNTIEEWRYGF CEEEECCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCCC QDGTTIVFKNGCKTSEIAYVKGVKEGLELRYNEQEIVAEEVSWRNDFLHGERKIYAGGIQ CCCCEEEEECCCCCCHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHCCCCEEEEECCCC KHEWYYRGRSVSKAKFERLNAAG CCEEEECCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA