| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is atoS
Identifier: 15836116
GI number: 15836116
Start: 672028
End: 673122
Strand: Direct
Name: atoS
Synonym: CPj0584
Alternate gene names: 15836116
Gene position: 672028-673122 (Clockwise)
Preceding gene: 15836115
Following gene: 15836118
Centisome position: 54.79
GC content: 42.47
Gene sequence:
>1095_bases ATGAACGTCCCTGATTCCAAGAACCTCCATCCTCCTGCATACGAACTCCTAGAGATCAAGGCTCGCATCACACAATCTTA TAAAGAAGCGAGTGCTATACTGACAGCGATTCCTGATGGTATCCTATTACTTTCTGAAACAGGACACTTTCTTATCTGCA ATTCACAAGCACGTGAAATTCTAGGAATTGATGAAAATCTAGAAATTCTTAATAGATCCTTTACCGATGTTCTCCCCGAT ACGTGTCTTGGATTTTCTATTCAAGAGGCTCTTGAATCTCTAAAAGTCCCTAAAACTCTTAGACTCTCTCTCTGTAAAGA ATCTAAAGAAAAAGAAGTGGAACTCTTCATCCGTAAAAACGAGATCAGTGGATACCTGTTTATCCAAATCCGCGATCGGT CCGACTATAAACAACTAGAAAACGCTATAGAAAGATATAGAAATATCGCAGAACTTGGGAAAATGACGGCTACCCTAGCT CACGAAATCCGCAATCCGCTAAGTGGAATCGTTGGATTTGCCTCTATCCTAAAGAAAGAGATTTCCTCTCCTCGCCACCA ACGAATGCTCTCCTCAATCATCTCCGGCACAAGGTCTCTAAATAACCTTGTCTCTTCTATGTTAGAATATACAAAATCAC AACCGTTGAACCTAAAGATTATAAATTTACAAGACTTCTTCTCTTCTCTTATCCCTCTGCTCTCCGTCTCTTTCCCGAAT TGCAAGTTTGTAAGAGAGGGCGCACAACCTCTATTCAGATCTATAGATCCTGATCGGATGAACAGTGTCGTTTGGAACCT AGTGAAAAATGCTGTAGAAACAGGGAACTCTCCGATCACTCTGACCCTGCATACATCGGGAGACATCTCGGTAACGAACC CCGGAACGATTCCTTCCGAGATCATGGACAAGCTCTTCACTCCATTCTTCACAACAAAGAGAGAGGGAAATGGTTTGGGA CTTGCTGAAGCTCAAAAAATTATAAGACTCCATGGAGGAGATATCCAATTAAAAACAAGCGACTCCGCCGTTAGCTTCTT CATAATCATCCCCGAACTTCTAGCGGCCCTACCCAAAGAAAGAGCCGCTAGCTAG
Upstream 100 bases:
>100_bases GATATCCAAGAAGAGCTGGAAGAAATCCGTGATGTTATTATTCGTATTCTAGATACGGATAAACGCAACTATGCACAGAA AAAAAAGGAATTTGGTATTT
Downstream 100 bases:
>100_bases AACGCGTTCTTGAATCTTCAAGACCACTTAGGGTTCTCAAAGATCATCTACGATGTTTTCTTATCCTTGAAATTGCTCTT GCTCTAGTCTTTCAACCTCC
Product: 2-component sensor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MNVPDSKNLHPPAYELLEIKARITQSYKEASAILTAIPDGILLLSETGHFLICNSQAREILGIDENLEILNRSFTDVLPD TCLGFSIQEALESLKVPKTLRLSLCKESKEKEVELFIRKNEISGYLFIQIRDRSDYKQLENAIERYRNIAELGKMTATLA HEIRNPLSGIVGFASILKKEISSPRHQRMLSSIISGTRSLNNLVSSMLEYTKSQPLNLKIINLQDFFSSLIPLLSVSFPN CKFVREGAQPLFRSIDPDRMNSVVWNLVKNAVETGNSPITLTLHTSGDISVTNPGTIPSEIMDKLFTPFFTTKREGNGLG LAEAQKIIRLHGGDIQLKTSDSAVSFFIIIPELLAALPKERAAS
Sequences:
>Translated_364_residues MNVPDSKNLHPPAYELLEIKARITQSYKEASAILTAIPDGILLLSETGHFLICNSQAREILGIDENLEILNRSFTDVLPD TCLGFSIQEALESLKVPKTLRLSLCKESKEKEVELFIRKNEISGYLFIQIRDRSDYKQLENAIERYRNIAELGKMTATLA HEIRNPLSGIVGFASILKKEISSPRHQRMLSSIISGTRSLNNLVSSMLEYTKSQPLNLKIINLQDFFSSLIPLLSVSFPN CKFVREGAQPLFRSIDPDRMNSVVWNLVKNAVETGNSPITLTLHTSGDISVTNPGTIPSEIMDKLFTPFFTTKREGNGLG LAEAQKIIRLHGGDIQLKTSDSAVSFFIIIPELLAALPKERAAS >Mature_364_residues MNVPDSKNLHPPAYELLEIKARITQSYKEASAILTAIPDGILLLSETGHFLICNSQAREILGIDENLEILNRSFTDVLPD TCLGFSIQEALESLKVPKTLRLSLCKESKEKEVELFIRKNEISGYLFIQIRDRSDYKQLENAIERYRNIAELGKMTATLA HEIRNPLSGIVGFASILKKEISSPRHQRMLSSIISGTRSLNNLVSSMLEYTKSQPLNLKIINLQDFFSSLIPLLSVSFPN CKFVREGAQPLFRSIDPDRMNSVVWNLVKNAVETGNSPITLTLHTSGDISVTNPGTIPSEIMDKLFTPFFTTKREGNGLG LAEAQKIIRLHGGDIQLKTSDSAVSFFIIIPELLAALPKERAAS
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788549, Length=336, Percent_Identity=26.4880952380952, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1790300, Length=353, Percent_Identity=23.5127478753541, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI48994928, Length=242, Percent_Identity=28.099173553719, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=26.5625, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 40526; Mature: 40526
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVPDSKNLHPPAYELLEIKARITQSYKEASAILTAIPDGILLLSETGHFLICNSQAREI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHH LGIDENLEILNRSFTDVLPDTCLGFSIQEALESLKVPKTLRLSLCKESKEKEVELFIRKN HCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEC EISGYLFIQIRDRSDYKQLENAIERYRNIAELGKMTATLAHEIRNPLSGIVGFASILKKE CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSPRHQRMLSSIISGTRSLNNLVSSMLEYTKSQPLNLKIINLQDFFSSLIPLLSVSFPN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCC CKFVREGAQPLFRSIDPDRMNSVVWNLVKNAVETGNSPITLTLHTSGDISVTNPGTIPSE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCHHH IMDKLFTPFFTTKREGNGLGLAEAQKIIRLHGGDIQLKTSDSAVSFFIIIPELLAALPKE HHHHHHCCHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHCCHH RAAS HCCC >Mature Secondary Structure MNVPDSKNLHPPAYELLEIKARITQSYKEASAILTAIPDGILLLSETGHFLICNSQAREI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCHHH LGIDENLEILNRSFTDVLPDTCLGFSIQEALESLKVPKTLRLSLCKESKEKEVELFIRKN HCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEC EISGYLFIQIRDRSDYKQLENAIERYRNIAELGKMTATLAHEIRNPLSGIVGFASILKKE CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSPRHQRMLSSIISGTRSLNNLVSSMLEYTKSQPLNLKIINLQDFFSSLIPLLSVSFPN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCC CKFVREGAQPLFRSIDPDRMNSVVWNLVKNAVETGNSPITLTLHTSGDISVTNPGTIPSE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCHHH IMDKLFTPFFTTKREGNGLGLAEAQKIIRLHGGDIQLKTSDSAVSFFIIIPELLAALPKE HHHHHHCCHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHCCHH RAAS HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]