| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is tsp
Identifier: 15836086
GI number: 15836086
Start: 637619
End: 639565
Strand: Direct
Name: tsp
Synonym: CPj0555
Alternate gene names: 15836086
Gene position: 637619-639565 (Clockwise)
Preceding gene: 15836085
Following gene: 15836090
Centisome position: 51.98
GC content: 40.68
Gene sequence:
>1947_bases ATGTTCGTAATGAAAAAACTTGTCCGTCTATGCGTAGTTCTTCTTTCTTTACTTCCGAATGTATTATTTTCTTCGGATCT TTTACGAGAAGAGGGCATCAAAAAGATGATGGACAAGCTGATCGAGTATCATGTCGATGCTCAAGAGGTTTCTACGGATA TACTCTCGCGTTCTTTATCTAGTTACATTCAATCTTTTGATCCTCATAAATCTTATCTTTCAAACCAAGAGGTTGCAGTT TTTCTACAGTCTCCGGAAACAAAGAAACGTCTCTTAAAGAATTATAAGGCAGGCAACTTTGCTATTTATCGCAACATCAA TCAATTGATTCATGAGAGTATTCTTCGTGCCAGGCAGTGGAGAAACGAATGGGTTAAGAATCCAAAAGAGCTTGTATTGG AGGCATCCTCATATCAGATATCGAAGCAACCTATGCAATGGAGCAAATCTTTAGACGAAGTGAAGCAGAGACAACGCGCT CTACTCCTTTCCTATCTTTCTTTACATCTTGCTGGAGCTTCTTCCTCTCGTTATGAGGGTAAAGAAGAGCAGCTTGCTGC TCTGTGTCTACGTCAAATCGAGAACCATGAGAATGTATATTTAGGTATCAACGATCATGGTGTTGCTATGGATCGGGATG AAGAAGCCTACCAATTCCATATCCGTGTTGTTAAAGCTTTAGCTCATAGCTTAGATGCACATACGGCGTATTTCAGTAAG GACGAAGCGTTGGCGATGCGAATCCAACTAGAAAAAGGCATGTGTGGAATTGGTGTTGTTCTGAAGGAAGATATTGATGG AGTTGTTGTTAGAGAAATCATTCCTGGGGGACCTGCGGCTAAATCTGGGGATCTTCAGCTTGGAGATATCATCTATCGGG TGGATGGCAAGGATATCGAGCATCTTTCTTTCCGCGGTGTTTTAGATTGTTTACGTGGAGGTCATGGCTCTACTGTAGTC TTAGATATCCATCGTGGGGAGAGCGATCATACGATCGCCTTGAGAAGGGAGAAAATCCTTTTAGAAGACCGTCGTGTGGA TGTTTCCTATGAGCCTTATGGAGATGGTGTGATTGGGAAAGTTACGTTACATTCTTTTTATGAAGGAGAAAATCAGGTTT CTAGTGAACAAGATCTACGTCGAGCGATTCAGGGATTAAAGGAGAAGAACCTTCTTGGATTAGTTTTAGATATCCGAGAA AATACGGGTGGATTTTTATCTCAAGCGATCAAAGTTTCTGGTTTATTTATGACCAATGGCGTTGTGGTTGTATCTCGCTA TGCTGATGGTACCATGAAGTGCTACCGCACAGTATCTCCTAAAAAATTCTATGATGGTCCTTTGGCTATTTTAGTATCTA AAAGTTCCGCATCAGCAGCGGAGATTGTAGCACAAACTCTCCAAGATTATGGAGTTGCTTTAGTTGTTGGAGATGAGCAG ACCTATGGGAAGGGAACGATTCAGCATCAAACAATTACTGGAGATGCCTCTCAGGACGATTGTTTTAAGGTTACTGTAGG GAAATATTATTCCCCTTCTGGGAAATCGACTCAACTTCAGGGAGTAAAATCCGATATTTTAATTCCTTCTCTCTATGCTG AAGATCGTCTAGGAGAGCGTTTTCTAGAGCATCCCTTACCTGCAGATTGCTGTGATAATGTACTTCACGATCCTCTCACG GACTTGGATACTCAAACACGTCCTTGGTTTCAAAAATACTATCTTCCTAATCTACAAAAGCAAGAGACTCTTTGGAGAGA GATGCTACCTCAGCTTACGAAAAACAGTGAGCAAAGGCTTTCTGAGAATTCGAATTTTCAGGCATTTTTGTCGCAGATAA AATCATCTGAAAAAACGGACCTATCCTATGGTTCCAATGATTTACAATTGGAAGAGTCGATAAACATTTTGAAGGACATG ATTTTATTACAACAGTGTAGAAAATAA
Upstream 100 bases:
>100_bases AGCTGTTTGTAATAAATTAGTTTCTCACATCTATAAGAAATCTGTGCTAAAGCCCTTGGGCTTCGTGCCGATGTTACGAA TATCCATTAACATTAAATAG
Downstream 100 bases:
>100_bases TTACTGTTGCTCTTTACATCTGATCTCGTACGTGGAAAGTAGCATCCCAAGTTCTAGGATGCTTGTGAGATGAACGTCTA AACGCGAGCTATTTTACTTA
Product: tail-specific protease
Products: NA
Alternate protein names: C-terminal-processing peptidase; PRC protein; Protease Re [H]
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MFVMKKLVRLCVVLLSLLPNVLFSSDLLREEGIKKMMDKLIEYHVDAQEVSTDILSRSLSSYIQSFDPHKSYLSNQEVAV FLQSPETKKRLLKNYKAGNFAIYRNINQLIHESILRARQWRNEWVKNPKELVLEASSYQISKQPMQWSKSLDEVKQRQRA LLLSYLSLHLAGASSSRYEGKEEQLAALCLRQIENHENVYLGINDHGVAMDRDEEAYQFHIRVVKALAHSLDAHTAYFSK DEALAMRIQLEKGMCGIGVVLKEDIDGVVVREIIPGGPAAKSGDLQLGDIIYRVDGKDIEHLSFRGVLDCLRGGHGSTVV LDIHRGESDHTIALRREKILLEDRRVDVSYEPYGDGVIGKVTLHSFYEGENQVSSEQDLRRAIQGLKEKNLLGLVLDIRE NTGGFLSQAIKVSGLFMTNGVVVVSRYADGTMKCYRTVSPKKFYDGPLAILVSKSSASAAEIVAQTLQDYGVALVVGDEQ TYGKGTIQHQTITGDASQDDCFKVTVGKYYSPSGKSTQLQGVKSDILIPSLYAEDRLGERFLEHPLPADCCDNVLHDPLT DLDTQTRPWFQKYYLPNLQKQETLWREMLPQLTKNSEQRLSENSNFQAFLSQIKSSEKTDLSYGSNDLQLEESINILKDM ILLQQCRK
Sequences:
>Translated_648_residues MFVMKKLVRLCVVLLSLLPNVLFSSDLLREEGIKKMMDKLIEYHVDAQEVSTDILSRSLSSYIQSFDPHKSYLSNQEVAV FLQSPETKKRLLKNYKAGNFAIYRNINQLIHESILRARQWRNEWVKNPKELVLEASSYQISKQPMQWSKSLDEVKQRQRA LLLSYLSLHLAGASSSRYEGKEEQLAALCLRQIENHENVYLGINDHGVAMDRDEEAYQFHIRVVKALAHSLDAHTAYFSK DEALAMRIQLEKGMCGIGVVLKEDIDGVVVREIIPGGPAAKSGDLQLGDIIYRVDGKDIEHLSFRGVLDCLRGGHGSTVV LDIHRGESDHTIALRREKILLEDRRVDVSYEPYGDGVIGKVTLHSFYEGENQVSSEQDLRRAIQGLKEKNLLGLVLDIRE NTGGFLSQAIKVSGLFMTNGVVVVSRYADGTMKCYRTVSPKKFYDGPLAILVSKSSASAAEIVAQTLQDYGVALVVGDEQ TYGKGTIQHQTITGDASQDDCFKVTVGKYYSPSGKSTQLQGVKSDILIPSLYAEDRLGERFLEHPLPADCCDNVLHDPLT DLDTQTRPWFQKYYLPNLQKQETLWREMLPQLTKNSEQRLSENSNFQAFLSQIKSSEKTDLSYGSNDLQLEESINILKDM ILLQQCRK >Mature_648_residues MFVMKKLVRLCVVLLSLLPNVLFSSDLLREEGIKKMMDKLIEYHVDAQEVSTDILSRSLSSYIQSFDPHKSYLSNQEVAV FLQSPETKKRLLKNYKAGNFAIYRNINQLIHESILRARQWRNEWVKNPKELVLEASSYQISKQPMQWSKSLDEVKQRQRA LLLSYLSLHLAGASSSRYEGKEEQLAALCLRQIENHENVYLGINDHGVAMDRDEEAYQFHIRVVKALAHSLDAHTAYFSK DEALAMRIQLEKGMCGIGVVLKEDIDGVVVREIIPGGPAAKSGDLQLGDIIYRVDGKDIEHLSFRGVLDCLRGGHGSTVV LDIHRGESDHTIALRREKILLEDRRVDVSYEPYGDGVIGKVTLHSFYEGENQVSSEQDLRRAIQGLKEKNLLGLVLDIRE NTGGFLSQAIKVSGLFMTNGVVVVSRYADGTMKCYRTVSPKKFYDGPLAILVSKSSASAAEIVAQTLQDYGVALVVGDEQ TYGKGTIQHQTITGDASQDDCFKVTVGKYYSPSGKSTQLQGVKSDILIPSLYAEDRLGERFLEHPLPADCCDNVLHDPLT DLDTQTRPWFQKYYLPNLQKQETLWREMLPQLTKNSEQRLSENSNFQAFLSQIKSSEKTDLSYGSNDLQLEESINILKDM ILLQQCRK
Specific function: Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). May be involved in protection of the bacterium from thermal and osmotic stresses [H]
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=427, Percent_Identity=32.0843091334895, Blast_Score=198, Evalue=9e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR020992 [H]
Pfam domain/function: PF11818 DUF3340; PF00595 PDZ; PF03572 Peptidase_S41 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 73162; Mature: 73162
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVMKKLVRLCVVLLSLLPNVLFSSDLLREEGIKKMMDKLIEYHVDAQEVSTDILSRSLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SYIQSFDPHKSYLSNQEVAVFLQSPETKKRLLKNYKAGNFAIYRNINQLIHESILRARQW HHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH RNEWVKNPKELVLEASSYQISKQPMQWSKSLDEVKQRQRALLLSYLSLHLAGASSSRYEG HHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEEQLAALCLRQIENHENVYLGINDHGVAMDRDEEAYQFHIRVVKALAHSLDAHTAYFSK HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DEALAMRIQLEKGMCGIGVVLKEDIDGVVVREIIPGGPAAKSGDLQLGDIIYRVDGKDIE CCEEEEEEEECCCCCCCCEEEECCCCCEEEEHHCCCCCCCCCCCEEECCEEEEECCCCCH HLSFRGVLDCLRGGHGSTVVLDIHRGESDHTIALRREKILLEDRRVDVSYEPYGDGVIGK HHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHCCCCCEEECCCCCCCEEE VTLHSFYEGENQVSSEQDLRRAIQGLKEKNLLGLVLDIRENTGGFLSQAIKVSGLFMTNG EEHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCEEEEECC VVVVSRYADGTMKCYRTVSPKKFYDGPLAILVSKSSASAAEIVAQTLQDYGVALVVGDEQ EEEEEECCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCC TYGKGTIQHQTITGDASQDDCFKVTVGKYYSPSGKSTQLQGVKSDILIPSLYAEDRLGER CCCCCCEEEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHH FLEHPLPADCCDNVLHDPLTDLDTQTRPWFQKYYLPNLQKQETLWREMLPQLTKNSEQRL HHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH SENSNFQAFLSQIKSSEKTDLSYGSNDLQLEESINILKDMILLQQCRK HCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFVMKKLVRLCVVLLSLLPNVLFSSDLLREEGIKKMMDKLIEYHVDAQEVSTDILSRSLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SYIQSFDPHKSYLSNQEVAVFLQSPETKKRLLKNYKAGNFAIYRNINQLIHESILRARQW HHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH RNEWVKNPKELVLEASSYQISKQPMQWSKSLDEVKQRQRALLLSYLSLHLAGASSSRYEG HHHHHCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEEQLAALCLRQIENHENVYLGINDHGVAMDRDEEAYQFHIRVVKALAHSLDAHTAYFSK HHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DEALAMRIQLEKGMCGIGVVLKEDIDGVVVREIIPGGPAAKSGDLQLGDIIYRVDGKDIE CCEEEEEEEECCCCCCCCEEEECCCCCEEEEHHCCCCCCCCCCCEEECCEEEEECCCCCH HLSFRGVLDCLRGGHGSTVVLDIHRGESDHTIALRREKILLEDRRVDVSYEPYGDGVIGK HHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHCCCCCEEECCCCCCCEEE VTLHSFYEGENQVSSEQDLRRAIQGLKEKNLLGLVLDIRENTGGFLSQAIKVSGLFMTNG EEHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCEEEEECC VVVVSRYADGTMKCYRTVSPKKFYDGPLAILVSKSSASAAEIVAQTLQDYGVALVVGDEQ EEEEEECCCCHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCC TYGKGTIQHQTITGDASQDDCFKVTVGKYYSPSGKSTQLQGVKSDILIPSLYAEDRLGER CCCCCCEEEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHH FLEHPLPADCCDNVLHDPLTDLDTQTRPWFQKYYLPNLQKQETLWREMLPQLTKNSEQRL HHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH SENSNFQAFLSQIKSSEKTDLSYGSNDLQLEESINILKDMILLQQCRK HCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856173; 1729701; 9097040; 9278503; 1447154; 10049386; 7499412; 8576225 [H]