Click here to switch to the map view.

The map label for this gene is nrdR

Identifier: 15836064

GI number: 15836064

Start: 614250

End: 614708

Strand: Direct

Name: nrdR

Synonym: CPj0533

Alternate gene names: 15836064

Gene position: 614250-614708 (Clockwise)

Preceding gene: 15836056

Following gene: 15836065

Centisome position: 50.08

GC content: 38.13

Gene sequence:

>459_bases
ATGCAGTGTCCTTTTTGCAATCATGGGGAGTTGAAAGTTATAGATTCAAGAAACGCTCCAGAAGCTAATGCAATAAAACG
CCGTCGGGAATGCTTAAAGTGCTCCCAACGTTTTACGACCTTTGAAACCGTTGAACTTACTTTACAAGTACTAAAACGTG
ATGGTCGCTACGAAAATTTTCAAGAATCTAAATTAATTCACGGTCTGAACGCAGCTTCTAGCCACACACGGATTGGTCAA
GACCAAGTTCATGCTATAGCTTCTAATGTTAAATCTGAACTCTTAGGTAAACAAAATAGGGAAATTTCTACCAAAGAAAT
TGGCGAACTAGTAATGAAATATCTTAAAAAGGCTGATATGATTGCCTACATCCGATTTGCCTGCGTTTATCGTCGATTCA
AGGACGTTGGTGAATTAATGGAAGTTTTATTGTCAGCAACTCCAGATATGGAAAAATAG

Upstream 100 bases:

>100_bases
GATTTCCTAGAAAAAAACTTTGCAACTATAGTCTCTTATATTTATCCTGATCTAAAAATTCGGTTTTTCTTAGACTACCT
TAACCTAGGAGGTAGCTCCC

Downstream 100 bases:

>100_bases
TTGAATTTTATAAGGAGCAAGGTTGTGCCGTTATCAGATGACGAAATAGAACAGTTTAAAAAAAGACTTTTGGAGATGAA
GGCAAAGTTATCGCATACTC

Product: NrdR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLKCSQRFTTFETVELTLQVLKRDGRYENFQESKLIHGLNAASSHTRIGQ
DQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDMEK

Sequences:

>Translated_152_residues
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLKCSQRFTTFETVELTLQVLKRDGRYENFQESKLIHGLNAASSHTRIGQ
DQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDMEK
>Mature_152_residues
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLKCSQRFTTFETVELTLQVLKRDGRYENFQESKLIHGLNAASSHTRIGQ
DQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADMIAYIRFACVYRRFKDVGELMEVLLSATPDMEK

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=142, Percent_Identity=45.7746478873239, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17467; Mature: 17467

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLKCSQRFTTFETVELTLQVLKRDGRYENF
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
QESKLIHGLNAASSHTRIGQDQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADM
HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IAYIRFACVYRRFKDVGELMEVLLSATPDMEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQCPFCNHGELKVIDSRNAPEANAIKRRRECLKCSQRFTTFETVELTLQVLKRDGRYENF
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH
QESKLIHGLNAASSHTRIGQDQVHAIASNVKSELLGKQNREISTKEIGELVMKYLKKADM
HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
IAYIRFACVYRRFKDVGELMEVLLSATPDMEK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA