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Identifier: 15836020

GI number: 15836020

Start: 569412

End: 570284

Strand: Reverse

Name: Not Available

Synonym: CPj0489

Alternate gene names: NA

Gene position: 570284-569412 (Counterclockwise)

Preceding gene: 15836022

Following gene: 15836019

Centisome position: 46.49

GC content: 39.63

Gene sequence:

>873_bases
ATGCAGATTCCAAGAAGCATTGGTACTCACGATGGTTCTTTCCATGCGGATGAGGTCACAGCGTGTGCTCTCCTTATTAT
TTTCGATCTTGTGGATGAAAATAAAATTATACGCTCTCGAGATCCTGTCGTATTATCGAAATGTGAATATGTTTGTGATG
TCGGTGGTGTTTATTCTATAGAAAACAAGCGTTTTGATCATCATCAAGTCTCTTATGATGGATCTTGGAGTAGTGCAGGT
ATGATTCTGCATTATCTTAAAGAGTTTGGTTATATGGATTGTGAAGAATATCATTTCCTTAACAACACTTTGGTACATGG
TGTGGATGAACAAGATAATGGCAGATTCTTCTCTAAGGAGGGATTTTGTTCGTTTTCTGATATTATTAAAATTTATAATC
CTCGCGAGGAAGAAGAAACTAATTCGGATGCGGATTTTTCTTGTGCTTTGCATTTTACCATCGACTTTTTGTGTCGGCTA
AGGAAGAAGTTTCAGTATGATCGAGTTTGTAGGGGGATTGTCAGAGAAGCCATGGAAACCGAGGATATGTGTTTATATTT
TGATCGTCCTTTAGCATGGCAAGAAAATTTCTTTTTTTTAGGGGGAGAGAAGCACCCTGCAGCTTTTGTTTGTTTTCCTT
CCTGCGATCAATGGATTTTACGAGGGATTCCTCCGAATTTAGATCGCCGTATGGAAGTTCGTGTTCCTTTCCCTGAGAAT
TGGGCAGGTTTGTTAGGTAAAGAGTTGTCCAAAGTATCAGGGATTCCTGGGGCTGTGTTCTGCCATAAAGGTCTTTTCCT
TTCTGTATGGACAAATAGAGAAAGTTGCCAACGTGCTTTGCGGTTAACGTTACAAGATCGAGGGATCATATGA

Upstream 100 bases:

>100_bases
TCTCTTGGAGAGATTGAGTAAAATGTAAAGAATAGTCTTTGCAATTGAGAATTATTTCTCTCTGGTTACAATGGAGGATT
GGCTAAGGAGGATAGTAGGT

Downstream 100 bases:

>100_bases
CAGTATTCAAACAAATTATCGATGGATTGATAGATTGTGAAAAGGTATTTGAAAACGAAAATTTCATAGCTATAAAAGAT
CGTTTTCCTCAAGCTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQVSYDGSWSSAG
MILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRL
RKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMEVRVPFPEN
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII

Sequences:

>Translated_290_residues
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQVSYDGSWSSAG
MILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRL
RKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMEVRVPFPEN
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
>Mature_290_residues
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSIENKRFDHHQVSYDGSWSSAG
MILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKEGFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRL
RKKFQYDRVCRGIVREAMETEDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMEVRVPFPEN
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII

Specific function: Unknown

COG id: COG4286

COG function: function code S; Uncharacterized conserved protein related to MYG1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0160 (MYG1) family

Homologues:

Organism=Homo sapiens, GI145275185, Length=334, Percent_Identity=30.5389221556886, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25150283, Length=324, Percent_Identity=29.0123456790123, Blast_Score=115, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6321004, Length=330, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24645226, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24645224, Length=77, Percent_Identity=45.4545454545455, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45551849, Length=77, Percent_Identity=45.4545454545455, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y489_CHLPN (Q9Z862)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A81597
- PIR:   E86551
- PIR:   H72071
- RefSeq:   NP_224685.1
- RefSeq:   NP_300544.1
- RefSeq:   NP_444816.1
- RefSeq:   NP_876781.1
- PHCI-2DPAGE:   Q9Z862
- GeneID:   1467188
- GeneID:   895221
- GeneID:   919232
- GeneID:   962908
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0265
- KEGG:   cpj:CPj0489
- KEGG:   cpn:CPn0489
- KEGG:   cpt:CpB0509
- TIGR:   CP_0265
- HOGENOM:   HBG415136
- OMA:   KLAECEY
- PhylomeDB:   Q9Z862
- ProtClustDB:   CLSK2517364
- BioCyc:   CPNE115711:CP_0265-MONOMER
- BioCyc:   CPNE115713:CPN0489-MONOMER
- BioCyc:   CPNE138677:CPJ0489-MONOMER
- BioCyc:   CPNE182082:CPB0509-MONOMER
- InterPro:   IPR003226
- PANTHER:   PTHR11215

Pfam domain/function: PF03690 UPF0160

EC number: NA

Molecular weight: Translated: 33488; Mature: 33488

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHCCCCEEEE
ENKRFDHHQVSYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKE
CCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCEECCC
GFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRLRKKFQYDRVCRGIVREAMET
CCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMEVRVPFPEN
CCEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCC
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
HHHHHHHHHHHHCCCCCHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIPRSIGTHDGSFHADEVTACALLIIFDLVDENKIIRSRDPVVLSKCEYVCDVGGVYSI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHCCCCEEEE
ENKRFDHHQVSYDGSWSSAGMILHYLKEFGYMDCEEYHFLNNTLVHGVDEQDNGRFFSKE
CCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCEECCC
GFCSFSDIIKIYNPREEEETNSDADFSCALHFTIDFLCRLRKKFQYDRVCRGIVREAMET
CCCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EDMCLYFDRPLAWQENFFFLGGEKHPAAFVCFPSCDQWILRGIPPNLDRRMEVRVPFPEN
CCEEEEECCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCC
WAGLLGKELSKVSGIPGAVFCHKGLFLSVWTNRESCQRALRLTLQDRGII
HHHHHHHHHHHHCCCCCHHEECCCEEEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362