| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836018
GI number: 15836018
Start: 567428
End: 569059
Strand: Reverse
Name: Not Available
Synonym: CPj0487
Alternate gene names: NA
Gene position: 569059-567428 (Counterclockwise)
Preceding gene: 15836019
Following gene: 15836017
Centisome position: 46.39
GC content: 44.73
Gene sequence:
>1632_bases TTGTTCGGCTCGGAGTCCCTCCGTTATCAATTGTTGATCCAAGATTTTGCAAAAGTTTCAGAAGAGGGCATAGGCCTTTT GGAGTCTAAAGAGTATTCTTTACTTCAGGCTAAGCTAGTTTTAAGGGCTCTGGCTCAAAATTCTTCTTTTGATGATTGGT TTAGAAGTTTTAAGAAGTGTCAGATTTCCTATCCAGAGTTAGCTCATGATCGCGATGTCTTAGAAGAATTTGGGATTCAA GTTCTGCGTGAGGGAATCGAAAATCCTTCCGTGACCGTTCGTGCTGTGAGTGTCCTTGCTATTGGGCTTGCTAGAGATTT TCGCTTGGTCCCTCTCCTGCTCCAAAGTTGTAATGATGACAGTGCTATTGTTCGATCTTTGGCTCTTCAGGTTGCTGTGA ACTATGGCTCTGAAAGTTTAAAAAAGGCCATTGTAGAGCTTGCCCGTAATGATGATTCTATTCATGTTCGGATTACAGCA TATCAGGTGGTCGCTCTTTTACAGATAGAGGAGCTATTGCCATTTTTAAGAGAGCGTGCTGAGAACAAACTTGTAGATAG TGTAGAACGTCGAGAGGCGTGGAAGGCTTGCTTGGAACTCTCTTCTCAATTTCTAGAGACGGGTGTAGCTAAGGACGATA TTGATCAAGCGTTGTTCACTTGTGAAGTGTTGCGTAACGGTATGTTGCCAGAGACTACTGAGATTTTTACAGAACTCTTA TCTGTAGAGCATCCTGAAGTGCAGGAGTCTCTCTTACTTTCTGCTTTAGCTTGGAGTCATCAGCTACAGAATCACAAAGA GTTTCTTAGTAAAGTGCGCCATGTGATGTGCACTTCTCCATTTGCAAAAGTACGTTTTCAAGCTGCTGCACTTCTCCATC TGCATGGAGACCCTTTGGGCAGAGACTCTCTGGTTGAGGGCTTGCGCTCTCCTCAACCTCTTGTGTGTGAGGCAGCTTCG GCGGCTCTCTGCTCTTTAGGAATCCATGGAGTCCCTTTGGCAAAGGAGCATTTGGAGAGCCTTTCTTCTCGAAAGGCTGC TGCGAACCTCTCCATTTTGCTTCTTGTGAGCCGTGAAGATATTGAAAGAGCTGGAGATGTGATTGCTCGCTACCTCTCCA ATCCTGAAATGTGCTGGGCTATAGAGTATTTCTTATGGGATGCACAATGGAATTTACGTGGTGATACCTTCCCTCTATAT TCGGATATGATTAAACGTGAGATTGGTAGGAAGCTCATTCGCCTTTTGGCAGTAGCTCGCTATAGCCAAGCCAAGGCTGT AACAGCAACGTTCCTTTCAGGACAGCAAGCTCAGGGATGGAGCTTTTTTTCTGGAATGTTCTGGGAAGAGGGAGATGTGA AAACTTCTGAGGATTTGGTTACAGATGCTTGCTTTGCAGCAAAGTTGGAAGGAGCGTTAGCCTCGCTATGTCAGAAAAAA GATCAAGCTTCCCTACAGAGGGTCTCTCAACTTTATAATGACAGCCGTTGGCAAGATAAATTAGCAATCTTAGAGAGCGT TGCTTTTTCTGAGAATCTTGATGCTGTGCCTTTTCTTCTAGACTGCTGCCATCACGAAGCTCCTTCGCTGCGAAGTGCAG CAGCGGGTGCTCTTTTCTCTATTTTCAAATAA
Upstream 100 bases:
>100_bases GTGCTGAAGGAGGACAGGCGGTATTTCACTTACATATTCATCTTTTAGGTGGGCGTCCTTTAGGTGCTATAGCCTAATTT TCTTTTGTTTCTGTGGATCC
Downstream 100 bases:
>100_bases ATATTAATAAAATTATTCAAGATATAGAAGAAAAACCACGCAGTTGTAATTTCTATTTCTTAAAAATAATTTTTCAGACT GACTTTATTCTTTCATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MFGSESLRYQLLIQDFAKVSEEGIGLLESKEYSLLQAKLVLRALAQNSSFDDWFRSFKKCQISYPELAHDRDVLEEFGIQ VLREGIENPSVTVRAVSVLAIGLARDFRLVPLLLQSCNDDSAIVRSLALQVAVNYGSESLKKAIVELARNDDSIHVRITA YQVVALLQIEELLPFLRERAENKLVDSVERREAWKACLELSSQFLETGVAKDDIDQALFTCEVLRNGMLPETTEIFTELL SVEHPEVQESLLLSALAWSHQLQNHKEFLSKVRHVMCTSPFAKVRFQAAALLHLHGDPLGRDSLVEGLRSPQPLVCEAAS AALCSLGIHGVPLAKEHLESLSSRKAAANLSILLLVSREDIERAGDVIARYLSNPEMCWAIEYFLWDAQWNLRGDTFPLY SDMIKREIGRKLIRLLAVARYSQAKAVTATFLSGQQAQGWSFFSGMFWEEGDVKTSEDLVTDACFAAKLEGALASLCQKK DQASLQRVSQLYNDSRWQDKLAILESVAFSENLDAVPFLLDCCHHEAPSLRSAAAGALFSIFK
Sequences:
>Translated_543_residues MFGSESLRYQLLIQDFAKVSEEGIGLLESKEYSLLQAKLVLRALAQNSSFDDWFRSFKKCQISYPELAHDRDVLEEFGIQ VLREGIENPSVTVRAVSVLAIGLARDFRLVPLLLQSCNDDSAIVRSLALQVAVNYGSESLKKAIVELARNDDSIHVRITA YQVVALLQIEELLPFLRERAENKLVDSVERREAWKACLELSSQFLETGVAKDDIDQALFTCEVLRNGMLPETTEIFTELL SVEHPEVQESLLLSALAWSHQLQNHKEFLSKVRHVMCTSPFAKVRFQAAALLHLHGDPLGRDSLVEGLRSPQPLVCEAAS AALCSLGIHGVPLAKEHLESLSSRKAAANLSILLLVSREDIERAGDVIARYLSNPEMCWAIEYFLWDAQWNLRGDTFPLY SDMIKREIGRKLIRLLAVARYSQAKAVTATFLSGQQAQGWSFFSGMFWEEGDVKTSEDLVTDACFAAKLEGALASLCQKK DQASLQRVSQLYNDSRWQDKLAILESVAFSENLDAVPFLLDCCHHEAPSLRSAAAGALFSIFK >Mature_543_residues MFGSESLRYQLLIQDFAKVSEEGIGLLESKEYSLLQAKLVLRALAQNSSFDDWFRSFKKCQISYPELAHDRDVLEEFGIQ VLREGIENPSVTVRAVSVLAIGLARDFRLVPLLLQSCNDDSAIVRSLALQVAVNYGSESLKKAIVELARNDDSIHVRITA YQVVALLQIEELLPFLRERAENKLVDSVERREAWKACLELSSQFLETGVAKDDIDQALFTCEVLRNGMLPETTEIFTELL SVEHPEVQESLLLSALAWSHQLQNHKEFLSKVRHVMCTSPFAKVRFQAAALLHLHGDPLGRDSLVEGLRSPQPLVCEAAS AALCSLGIHGVPLAKEHLESLSSRKAAANLSILLLVSREDIERAGDVIARYLSNPEMCWAIEYFLWDAQWNLRGDTFPLY SDMIKREIGRKLIRLLAVARYSQAKAVTATFLSGQQAQGWSFFSGMFWEEGDVKTSEDLVTDACFAAKLEGALASLCQKK DQASLQRVSQLYNDSRWQDKLAILESVAFSENLDAVPFLLDCCHHEAPSLRSAAAGALFSIFK
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60682; Mature: 60682
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGSESLRYQLLIQDFAKVSEEGIGLLESKEYSLLQAKLVLRALAQNSSFDDWFRSFKKC CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC QISYPELAHDRDVLEEFGIQVLREGIENPSVTVRAVSVLAIGLARDFRLVPLLLQSCNDD CCCCCHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCH SAIVRSLALQVAVNYGSESLKKAIVELARNDDSIHVRITAYQVVALLQIEELLPFLRERA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH ENKLVDSVERREAWKACLELSSQFLETGVAKDDIDQALFTCEVLRNGMLPETTEIFTELL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SVEHPEVQESLLLSALAWSHQLQNHKEFLSKVRHVMCTSPFAKVRFQAAALLHLHGDPLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCC RDSLVEGLRSPQPLVCEAASAALCSLGIHGVPLAKEHLESLSSRKAAANLSILLLVSRED HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECHHH IERAGDVIARYLSNPEMCWAIEYFLWDAQWNLRGDTFPLYSDMIKREIGRKLIRLLAVAR HHHHHHHHHHHHCCCCCEEEEEEHEEECEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YSQAKAVTATFLSGQQAQGWSFFSGMFWEEGDVKTSEDLVTDACFAAKLEGALASLCQKK HHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DQASLQRVSQLYNDSRWQDKLAILESVAFSENLDAVPFLLDCCHHEAPSLRSAAAGALFS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH IFK HCC >Mature Secondary Structure MFGSESLRYQLLIQDFAKVSEEGIGLLESKEYSLLQAKLVLRALAQNSSFDDWFRSFKKC CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC QISYPELAHDRDVLEEFGIQVLREGIENPSVTVRAVSVLAIGLARDFRLVPLLLQSCNDD CCCCCHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCH SAIVRSLALQVAVNYGSESLKKAIVELARNDDSIHVRITAYQVVALLQIEELLPFLRERA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH ENKLVDSVERREAWKACLELSSQFLETGVAKDDIDQALFTCEVLRNGMLPETTEIFTELL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SVEHPEVQESLLLSALAWSHQLQNHKEFLSKVRHVMCTSPFAKVRFQAAALLHLHGDPLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCC RDSLVEGLRSPQPLVCEAASAALCSLGIHGVPLAKEHLESLSSRKAAANLSILLLVSRED HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECHHH IERAGDVIARYLSNPEMCWAIEYFLWDAQWNLRGDTFPLYSDMIKREIGRKLIRLLAVAR HHHHHHHHHHHHCCCCCEEEEEEHEEECEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YSQAKAVTATFLSGQQAQGWSFFSGMFWEEGDVKTSEDLVTDACFAAKLEGALASLCQKK HHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DQASLQRVSQLYNDSRWQDKLAILESVAFSENLDAVPFLLDCCHHEAPSLRSAAAGALFS HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH IFK HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA