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The map label for this gene is pmp_17.3

Identifier: 15836001

GI number: 15836001

Start: 540676

End: 541854

Strand: Direct

Name: pmp_17.3

Synonym: CPj0470

Alternate gene names: 15836001

Gene position: 540676-541854 (Clockwise)

Preceding gene: 15836000

Following gene: 15836002

Centisome position: 44.08

GC content: 44.87

Gene sequence:

>1179_bases
ATCTCTCTGAACCTCGAAAGGATATCCCCCCTCCTCTACCTCCTCGATGTGACTGCAAAAAAAATCGATACTTCGAATCT
CATTGTAGAAGCCATGAACTTAGATGAGCACTATGGATATCAGGGAATCTGGTCTCCCTATTGGATGGAAACTACGACTA
CAACAAGCTCTACAGTACCGGAACAGACCAATACAAACCACAGGCAGCTCTACGTAGACTGGACTCCTGTAGGATACCGC
CCTAACCCGGAACGTCACGGAGAATTTATTGCTAATACCTTATGGCAGTCTGCCTATAACGCTCTGTTAGGAATCCGCAT
CTTACCTCCACAAAACCTCAAAGAGCATGACCTTGAAGCCTCTCTGCAAGGACTCGGGCTTCTAATTAACCAACATAATC
GCGAGGGACGCAAAGGCTTCCGAAACCATACTACGGGCTATGCAGCAACAACCTCAGCAAAAACTGCAGCACGACATAGT
TTCTCTTTAGGATTCGCACAAATGTTCTCCAAAACTAGAGAACGTCAATCTCCAAGTACGACTTCCTCCCACAACTACTT
TGCAGGACTCCGCTTCGACAGTCTCCTCTTCAGGGACTTCATCTCTACAGGGCTATCCCTAGGTTATAGCTACGGAGATC
ACCATATGCTTTGCCACTATACAGAAATCTTAAAAGGGTCGTCCAAAGCCTTCTTTAATAACCACACTTTGGTAGCCTCT
CTAGACTGCACATTCTTACCAGCTAGAATCACCCGCACTCTCGAACTCCAGCCCTTTATCAGTGCCATTGCTCTGCGCTG
TTCCCAGGCCTCGTTCCAAGAAACTGGAGACCATATAAGAAAATTCCATCCAAAACATCCCCTTACAGATCTTTCCTCTC
CCATAGGCTTCCGTTCTGAATGGAAAACTTCACATCATATCCCCATGCTATGGACTACGGAAATATCCTACGTACCTACC
CTATACAGAAAAAATCCAGAAATGTTCACGACACTACTCATCAGCAATGGAACATGGACAACACAAGCAACTCCCGTCTC
CTATAATTCCGTAGCTGCAAAAATAAAAAATACTTCCCAACTTTTCTCAAGAGTAACCTTATCCTTAGATTATTCAGCTC
AAGTCTCCTCGTCAACTGTAGGTCAATACCTTAAAGCTGAGAGTCATTGCACATTTTAA

Upstream 100 bases:

>100_bases
ACAGGATCCACCTATTCTGAAGACACTTCTTCTACTATCACTCTCTCAGGACCCTTGACTTTTCTAAACGATGAAAATGA
AAACCCCTATGATAGCTTAG

Downstream 100 bases:

>100_bases
CCACAAAGAAAACATCAAGGAATAAACAGTGCAAAATAACAGATCCCTTAGTAAATCTTCCTTCTTTGTTGGAGCCTTAA
TTTTAGGTAAAACTACAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Polymorphic membrane protein 15 [H]

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSLNLERISPLLYLLDVTAKKIDTSNLIVEAMNLDEHYGYQGIWSPYWMETTTTTSSTVPEQTNTNHRQLYVDWTPVGYR
PNPERHGEFIANTLWQSAYNALLGIRILPPQNLKEHDLEASLQGLGLLINQHNREGRKGFRNHTTGYAATTSAKTAARHS
FSLGFAQMFSKTRERQSPSTTSSHNYFAGLRFDSLLFRDFISTGLSLGYSYGDHHMLCHYTEILKGSSKAFFNNHTLVAS
LDCTFLPARITRTLELQPFISAIALRCSQASFQETGDHIRKFHPKHPLTDLSSPIGFRSEWKTSHHIPMLWTTEISYVPT
LYRKNPEMFTTLLISNGTWTTQATPVSYNSVAAKIKNTSQLFSRVTLSLDYSAQVSSSTVGQYLKAESHCTF

Sequences:

>Translated_392_residues
MSLNLERISPLLYLLDVTAKKIDTSNLIVEAMNLDEHYGYQGIWSPYWMETTTTTSSTVPEQTNTNHRQLYVDWTPVGYR
PNPERHGEFIANTLWQSAYNALLGIRILPPQNLKEHDLEASLQGLGLLINQHNREGRKGFRNHTTGYAATTSAKTAARHS
FSLGFAQMFSKTRERQSPSTTSSHNYFAGLRFDSLLFRDFISTGLSLGYSYGDHHMLCHYTEILKGSSKAFFNNHTLVAS
LDCTFLPARITRTLELQPFISAIALRCSQASFQETGDHIRKFHPKHPLTDLSSPIGFRSEWKTSHHIPMLWTTEISYVPT
LYRKNPEMFTTLLISNGTWTTQATPVSYNSVAAKIKNTSQLFSRVTLSLDYSAQVSSSTVGQYLKAESHCTF
>Mature_391_residues
SLNLERISPLLYLLDVTAKKIDTSNLIVEAMNLDEHYGYQGIWSPYWMETTTTTSSTVPEQTNTNHRQLYVDWTPVGYRP
NPERHGEFIANTLWQSAYNALLGIRILPPQNLKEHDLEASLQGLGLLINQHNREGRKGFRNHTTGYAATTSAKTAARHSF
SLGFAQMFSKTRERQSPSTTSSHNYFAGLRFDSLLFRDFISTGLSLGYSYGDHHMLCHYTEILKGSSKAFFNNHTLVASL
DCTFLPARITRTLELQPFISAIALRCSQASFQETGDHIRKFHPKHPLTDLSSPIGFRSEWKTSHHIPMLWTTEISYVPTL
YRKNPEMFTTLLISNGTWTTQATPVSYNSVAAKIKNTSQLFSRVTLSLDYSAQVSSSTVGQYLKAESHCTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Cell outer membrane; Peripheral membrane protein; Extracellular side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003368
- InterPro:   IPR011427 [H]

Pfam domain/function: PF03797 Autotransporter; PF02415 Chlam_PMP; PF07548 ChlamPMP_M [H]

EC number: NA

Molecular weight: Translated: 44365; Mature: 44234

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNLERISPLLYLLDVTAKKIDTSNLIVEAMNLDEHYGYQGIWSPYWMETTTTTSSTVP
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEEEECCCCCCCC
EQTNTNHRQLYVDWTPVGYRPNPERHGEFIANTLWQSAYNALLGIRILPPQNLKEHDLEA
CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHH
SLQGLGLLINQHNREGRKGFRNHTTGYAATTSAKTAARHSFSLGFAQMFSKTRERQSPST
HHHHHEEEEECCCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TSSHNYFAGLRFDSLLFRDFISTGLSLGYSYGDHHMLCHYTEILKGSSKAFFNNHTLVAS
CCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCEEECCCEEEEE
LDCTFLPARITRTLELQPFISAIALRCSQASFQETGDHIRKFHPKHPLTDLSSPIGFRSE
CCCEEECHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCC
WKTSHHIPMLWTTEISYVPTLYRKNPEMFTTLLISNGTWTTQATPVSYNSVAAKIKNTSQ
CCCCCCCCEEEECCCCCCCHHHHCCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHH
LFSRVTLSLDYSAQVSSSTVGQYLKAESHCTF
HHHHEEEEECCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLNLERISPLLYLLDVTAKKIDTSNLIVEAMNLDEHYGYQGIWSPYWMETTTTTSSTVP
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEEEECCCCCCCC
EQTNTNHRQLYVDWTPVGYRPNPERHGEFIANTLWQSAYNALLGIRILPPQNLKEHDLEA
CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHH
SLQGLGLLINQHNREGRKGFRNHTTGYAATTSAKTAARHSFSLGFAQMFSKTRERQSPST
HHHHHEEEEECCCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TSSHNYFAGLRFDSLLFRDFISTGLSLGYSYGDHHMLCHYTEILKGSSKAFFNNHTLVAS
CCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCEEECCCEEEEE
LDCTFLPARITRTLELQPFISAIALRCSQASFQETGDHIRKFHPKHPLTDLSSPIGFRSE
CCCEEECHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCC
WKTSHHIPMLWTTEISYVPTLYRKNPEMFTTLLISNGTWTTQATPVSYNSVAAKIKNTSQ
CCCCCCCCEEEECCCCCCCHHHHCCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHH
LFSRVTLSLDYSAQVSSSTVGQYLKAESHCTF
HHHHEEEEECCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]