| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835993
GI number: 15835993
Start: 528353
End: 530371
Strand: Reverse
Name: Not Available
Synonym: CPj0462
Alternate gene names: NA
Gene position: 530371-528353 (Counterclockwise)
Preceding gene: 15835994
Following gene: 15835992
Centisome position: 43.24
GC content: 43.44
Gene sequence:
>2019_bases ATGGCATGCTATATTTCTATTTGGATATCTACAGTTAAGCAGCATTTTATTAGGGCTTTTGATTTTACACGTCCTCTTGG TTCTCGGATTACAAATTTTGCTTTGGGGGTCATCAAGGCTATTCCCATTTTAGGATGCGTTGTTATAGGGGTAAGTTGGC TAGTTTCCACATGTTCTGCACGAAGGTTTGGGAAACCGGCATTTACTTCTGACGTTGCTAGTATCGTGAAAATAGAAAAA ACTCGAGGTTATAATCCCCTTGCTTGGGTGGAACAGTACTTGAGACAGCTTAGGGTTCGACTTCCTGAAGGAGATTTAGG AAAAATCCATGGGAAGGTCTCCAGAGATTATGTTTGCGACAGGACTCCCCAAGAAAATCTGAATATGGTTCCTCATCAAT ATCTGGGAGAGCTAGGTCGCGCGTTTTATGGAATCCGCAACCGAGTAACCAAGGCGTATCAACGAGTCACTCCTCTGGAA GTCCCTTGTCTTACGCTCGTCGGTTTTGACATTTTAGATCCCGAAGATCAGGTGAATTTCGTTCGTCTGGCTAACGGCAT ACAAACTCAGTACCCCCAAACTCAAATAAAACTTTATTTAATCTCTATCCAAAAGATATGGAATCAGTGTGACGGTACGA TTTCTCAAGAAAAAGAACAGCAACTCCGCTCTCTAGGTTTGGATGCTAAAATCAAATGTGTGTCGGCCCCCGCTCTCCTG CTCCAGAAATATCTTCAATCCGAGAACTTGCCTTCCTGTGATCTTCTCATTAATTATTACGGGAAACAACAGTCCGTCAG AGACGTGGACTCTATAAAGAGTCTACTCAATCTTTCTTCCGAACATATCCCTGCGATTTCTGTAACCTATAGACCTGACG ATCCTTTTTATAGCTACTATTTCTTTCCTGGTTCTCAAGGAGGAACGGCACCCGATCAGAGGATCCCTTGGAGTGAGCAG GAGCATCTTCAAACGTATACCACCCTGTCTAACCCTAGATGTGATAGATATGCTGTTCACTTGGGAATGGAAGATTTTGC CTCTGGAGTATTTTTAGATCCTCTTAGGGTTTCGGCTCCTTTATCTGGAGAGTATTCCTGCCCCTCATACCTCTTAGATT TAAAAAGTGAAGAGCTTCGTTGTTTCTTGTTATCCGCTTTTATAGATCCCAACAATTCTGGTCAGGGAAATCCGCGTCCT ATGTCCATAAACTTTGGAAACTCTCCTTTGGGTCAGAGGTGGTCTGAGTTTCTATCTCGTGTTCTACATGATGAAACAGA AAAGCATGTGGCTGTAGTCTGCAATAATCCACAACTTATAAAAAAGAGTTTTCCCTCACATTCTTTATCTCTATTAGAGA ACGAACTGGAAGAGTCAGGTTATTCTTATTTGAATATCGTTTCAGTGAGTCAGGAACGCACGTGTGTTAAGGAACGTAGA ATTTTAAGTTCTGATCCTTCGGGGAGGTCATTCACTGTAATCCTCACTGATCTTCCTGAAGGGAGTTCGGATATCCGCAA CTTGCAGCTAGCGTCAGATAGGATCTTAGTTTCTAGTGCTCTCGATGCTGCTGATGCCTGTGCTTCTGAATGTAAGATCT TAGAATATGAGGATCCCGAGCAAGAGTGGGCGCAACAGTATGCGTCGTTCTATAGAAACATCGACAGGGCAGGCGATCTT CAACGTCAGGGGATTCCAGGAGAGCCTTTAGGGGTCTCAGCATCTACGAGAGTAGTTTTAGAAAAGGACATCGTATTCAA TCTCAATGCGGTAATCCAACAGGCCATGTGGAAGTTTAAAAAACGGGATCTTTTTGCTGTAGAAAGTCAGGCTTTAGGAG ATGACATGCGACGTGCTTTAGAAGGTTATATCGGCAGCAGTCTCTTAGTTGAGGGGACTATACAGCCTCAAGTCGCATGT AATGTCAATGTGAGTTTTGCTACGTTAGACGAGGCTGTGTGTGCAGCTTGTGACTCAGCTCAAGATGCACCTTCTGAGGA GAACAATACAGATGACTAA
Upstream 100 bases:
>100_bases CTATCGTGTTGTTCTTATTAAAAGATAGTTAATTTTCTATCTTTTTTTAAATCTTTATATAGCCTGCGTACGCTTTCATT TTCAATGTTGGTTTGATCCT
Downstream 100 bases:
>100_bases AGATCGCAATCTTGTGAACGAAATCGCAGATTGATGGGAACTAATTAGACACACCTTTCTAAGGTGTTTGTTTTGATGAA CCTTTTTATTAGTCCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 672; Mature: 671
Protein sequence:
>672_residues MACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSARRFGKPAFTSDVASIVKIEK TRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCDRTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLE VPCLTLVGFDILDPEDQVNFVRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYYFFPGSQGGTAPDQRIPWSEQ EHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAPLSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRP MSINFGNSPLGQRWSEFLSRVLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPEQEWAQQYASFYRNIDRAGDL QRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFKKRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVAC NVNVSFATLDEAVCAACDSAQDAPSEENNTDD
Sequences:
>Translated_672_residues MACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSARRFGKPAFTSDVASIVKIEK TRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCDRTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLE VPCLTLVGFDILDPEDQVNFVRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYYFFPGSQGGTAPDQRIPWSEQ EHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAPLSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRP MSINFGNSPLGQRWSEFLSRVLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPEQEWAQQYASFYRNIDRAGDL QRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFKKRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVAC NVNVSFATLDEAVCAACDSAQDAPSEENNTDD >Mature_671_residues ACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSARRFGKPAFTSDVASIVKIEKT RGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCDRTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLEV PCLTLVGFDILDPEDQVNFVRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALLL QKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYYFFPGSQGGTAPDQRIPWSEQE HLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAPLSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRPM SINFGNSPLGQRWSEFLSRVLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERRI LSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPEQEWAQQYASFYRNIDRAGDLQ RQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFKKRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVACN VNVSFATLDEAVCAACDSAQDAPSEENNTDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75247; Mature: 75116
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSA CEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRFGKPAFTSDVASIVKIEKTRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCD HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC RTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLEVPCLTLVGFDILDPEDQVNF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHH VRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL HHHHCCHHCCCCCCEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHH LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYY HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEE FFPGSQGGTAPDQRIPWSEQEHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAP EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCEECCCEECCC LSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRPMSINFGNSPLGQRWSEFLSR CCCCCCCCHHHHHCCCCHHHEEEEEHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH VLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR HHHCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPE HHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCH QEWAQQYASFYRNIDRAGDLQRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFK HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHH KRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVACNVNVSFATLDEAVCAACDSA HCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC QDAPSEENNTDD CCCCCCCCCCCC >Mature Secondary Structure ACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSA EEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRFGKPAFTSDVASIVKIEKTRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCD HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC RTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLEVPCLTLVGFDILDPEDQVNF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHH VRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL HHHHCCHHCCCCCCEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHH LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYY HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEE FFPGSQGGTAPDQRIPWSEQEHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAP EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCEECCCEECCC LSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRPMSINFGNSPLGQRWSEFLSR CCCCCCCCHHHHHCCCCHHHEEEEEHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH VLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR HHHCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPE HHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCH QEWAQQYASFYRNIDRAGDLQRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFK HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHH KRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVACNVNVSFATLDEAVCAACDSA HCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC QDAPSEENNTDD CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA