Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835993

GI number: 15835993

Start: 528353

End: 530371

Strand: Reverse

Name: Not Available

Synonym: CPj0462

Alternate gene names: NA

Gene position: 530371-528353 (Counterclockwise)

Preceding gene: 15835994

Following gene: 15835992

Centisome position: 43.24

GC content: 43.44

Gene sequence:

>2019_bases
ATGGCATGCTATATTTCTATTTGGATATCTACAGTTAAGCAGCATTTTATTAGGGCTTTTGATTTTACACGTCCTCTTGG
TTCTCGGATTACAAATTTTGCTTTGGGGGTCATCAAGGCTATTCCCATTTTAGGATGCGTTGTTATAGGGGTAAGTTGGC
TAGTTTCCACATGTTCTGCACGAAGGTTTGGGAAACCGGCATTTACTTCTGACGTTGCTAGTATCGTGAAAATAGAAAAA
ACTCGAGGTTATAATCCCCTTGCTTGGGTGGAACAGTACTTGAGACAGCTTAGGGTTCGACTTCCTGAAGGAGATTTAGG
AAAAATCCATGGGAAGGTCTCCAGAGATTATGTTTGCGACAGGACTCCCCAAGAAAATCTGAATATGGTTCCTCATCAAT
ATCTGGGAGAGCTAGGTCGCGCGTTTTATGGAATCCGCAACCGAGTAACCAAGGCGTATCAACGAGTCACTCCTCTGGAA
GTCCCTTGTCTTACGCTCGTCGGTTTTGACATTTTAGATCCCGAAGATCAGGTGAATTTCGTTCGTCTGGCTAACGGCAT
ACAAACTCAGTACCCCCAAACTCAAATAAAACTTTATTTAATCTCTATCCAAAAGATATGGAATCAGTGTGACGGTACGA
TTTCTCAAGAAAAAGAACAGCAACTCCGCTCTCTAGGTTTGGATGCTAAAATCAAATGTGTGTCGGCCCCCGCTCTCCTG
CTCCAGAAATATCTTCAATCCGAGAACTTGCCTTCCTGTGATCTTCTCATTAATTATTACGGGAAACAACAGTCCGTCAG
AGACGTGGACTCTATAAAGAGTCTACTCAATCTTTCTTCCGAACATATCCCTGCGATTTCTGTAACCTATAGACCTGACG
ATCCTTTTTATAGCTACTATTTCTTTCCTGGTTCTCAAGGAGGAACGGCACCCGATCAGAGGATCCCTTGGAGTGAGCAG
GAGCATCTTCAAACGTATACCACCCTGTCTAACCCTAGATGTGATAGATATGCTGTTCACTTGGGAATGGAAGATTTTGC
CTCTGGAGTATTTTTAGATCCTCTTAGGGTTTCGGCTCCTTTATCTGGAGAGTATTCCTGCCCCTCATACCTCTTAGATT
TAAAAAGTGAAGAGCTTCGTTGTTTCTTGTTATCCGCTTTTATAGATCCCAACAATTCTGGTCAGGGAAATCCGCGTCCT
ATGTCCATAAACTTTGGAAACTCTCCTTTGGGTCAGAGGTGGTCTGAGTTTCTATCTCGTGTTCTACATGATGAAACAGA
AAAGCATGTGGCTGTAGTCTGCAATAATCCACAACTTATAAAAAAGAGTTTTCCCTCACATTCTTTATCTCTATTAGAGA
ACGAACTGGAAGAGTCAGGTTATTCTTATTTGAATATCGTTTCAGTGAGTCAGGAACGCACGTGTGTTAAGGAACGTAGA
ATTTTAAGTTCTGATCCTTCGGGGAGGTCATTCACTGTAATCCTCACTGATCTTCCTGAAGGGAGTTCGGATATCCGCAA
CTTGCAGCTAGCGTCAGATAGGATCTTAGTTTCTAGTGCTCTCGATGCTGCTGATGCCTGTGCTTCTGAATGTAAGATCT
TAGAATATGAGGATCCCGAGCAAGAGTGGGCGCAACAGTATGCGTCGTTCTATAGAAACATCGACAGGGCAGGCGATCTT
CAACGTCAGGGGATTCCAGGAGAGCCTTTAGGGGTCTCAGCATCTACGAGAGTAGTTTTAGAAAAGGACATCGTATTCAA
TCTCAATGCGGTAATCCAACAGGCCATGTGGAAGTTTAAAAAACGGGATCTTTTTGCTGTAGAAAGTCAGGCTTTAGGAG
ATGACATGCGACGTGCTTTAGAAGGTTATATCGGCAGCAGTCTCTTAGTTGAGGGGACTATACAGCCTCAAGTCGCATGT
AATGTCAATGTGAGTTTTGCTACGTTAGACGAGGCTGTGTGTGCAGCTTGTGACTCAGCTCAAGATGCACCTTCTGAGGA
GAACAATACAGATGACTAA

Upstream 100 bases:

>100_bases
CTATCGTGTTGTTCTTATTAAAAGATAGTTAATTTTCTATCTTTTTTTAAATCTTTATATAGCCTGCGTACGCTTTCATT
TTCAATGTTGGTTTGATCCT

Downstream 100 bases:

>100_bases
AGATCGCAATCTTGTGAACGAAATCGCAGATTGATGGGAACTAATTAGACACACCTTTCTAAGGTGTTTGTTTTGATGAA
CCTTTTTATTAGTCCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 672; Mature: 671

Protein sequence:

>672_residues
MACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSARRFGKPAFTSDVASIVKIEK
TRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCDRTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLE
VPCLTLVGFDILDPEDQVNFVRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL
LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYYFFPGSQGGTAPDQRIPWSEQ
EHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAPLSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRP
MSINFGNSPLGQRWSEFLSRVLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR
ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPEQEWAQQYASFYRNIDRAGDL
QRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFKKRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVAC
NVNVSFATLDEAVCAACDSAQDAPSEENNTDD

Sequences:

>Translated_672_residues
MACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSARRFGKPAFTSDVASIVKIEK
TRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCDRTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLE
VPCLTLVGFDILDPEDQVNFVRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL
LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYYFFPGSQGGTAPDQRIPWSEQ
EHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAPLSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRP
MSINFGNSPLGQRWSEFLSRVLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR
ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPEQEWAQQYASFYRNIDRAGDL
QRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFKKRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVAC
NVNVSFATLDEAVCAACDSAQDAPSEENNTDD
>Mature_671_residues
ACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSARRFGKPAFTSDVASIVKIEKT
RGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCDRTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLEV
PCLTLVGFDILDPEDQVNFVRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALLL
QKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYYFFPGSQGGTAPDQRIPWSEQE
HLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAPLSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRPM
SINFGNSPLGQRWSEFLSRVLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERRI
LSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPEQEWAQQYASFYRNIDRAGDLQ
RQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFKKRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVACN
VNVSFATLDEAVCAACDSAQDAPSEENNTDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75247; Mature: 75116

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSA
CEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFGKPAFTSDVASIVKIEKTRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCD
HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC
RTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLEVPCLTLVGFDILDPEDQVNF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHH
VRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL
HHHHCCHHCCCCCCEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHH
LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYY
HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEE
FFPGSQGGTAPDQRIPWSEQEHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAP
EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCEECCCEECCC
LSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRPMSINFGNSPLGQRWSEFLSR
CCCCCCCCHHHHHCCCCHHHEEEEEHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
VLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR
HHHCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPE
HHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCH
QEWAQQYASFYRNIDRAGDLQRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFK
HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHH
KRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVACNVNVSFATLDEAVCAACDSA
HCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC
QDAPSEENNTDD
CCCCCCCCCCCC
>Mature Secondary Structure 
ACYISIWISTVKQHFIRAFDFTRPLGSRITNFALGVIKAIPILGCVVIGVSWLVSTCSA
EEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFGKPAFTSDVASIVKIEKTRGYNPLAWVEQYLRQLRVRLPEGDLGKIHGKVSRDYVCD
HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCC
RTPQENLNMVPHQYLGELGRAFYGIRNRVTKAYQRVTPLEVPCLTLVGFDILDPEDQVNF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHH
VRLANGIQTQYPQTQIKLYLISIQKIWNQCDGTISQEKEQQLRSLGLDAKIKCVSAPALL
HHHHCCHHCCCCCCEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHH
LQKYLQSENLPSCDLLINYYGKQQSVRDVDSIKSLLNLSSEHIPAISVTYRPDDPFYSYY
HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEE
FFPGSQGGTAPDQRIPWSEQEHLQTYTTLSNPRCDRYAVHLGMEDFASGVFLDPLRVSAP
EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCEECCCEECCC
LSGEYSCPSYLLDLKSEELRCFLLSAFIDPNNSGQGNPRPMSINFGNSPLGQRWSEFLSR
CCCCCCCCHHHHHCCCCHHHEEEEEHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
VLHDETEKHVAVVCNNPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERR
HHHCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
ILSSDPSGRSFTVILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPE
HHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCH
QEWAQQYASFYRNIDRAGDLQRQGIPGEPLGVSASTRVVLEKDIVFNLNAVIQQAMWKFK
HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHH
KRDLFAVESQALGDDMRRALEGYIGSSLLVEGTIQPQVACNVNVSFATLDEAVCAACDSA
HCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCC
QDAPSEENNTDD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA