| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835976
GI number: 15835976
Start: 488439
End: 489692
Strand: Direct
Name: Not Available
Synonym: CPj0443
Alternate gene names: NA
Gene position: 488439-489692 (Clockwise)
Preceding gene: 15835975
Following gene: 15835977
Centisome position: 39.82
GC content: 46.89
Gene sequence:
>1254_bases ATGAGCCAACCCCCTATAAACCCTTTAGGTCAACCTCAAGTTCCTGCAGCAGCATCCCCATCAGGGCAGCCAAGCGTGGT AAAACGTTTAAAAACGTCATCCACAGGGTTATTCAAAAGATTTATTACTGTTCCTGATAAATATCCTAAAATGCGCTATG TCTATGACACAGGCATTATTGCCCTTGCGGCAATTGCGATCCTTTCGATTCTCCTGACTGCTTCAGGAAACAGCCTTATG CTTTATGCTCTCGCTCCGGCACTTGCCCTGGGAGCTTTGGGAGTTACTCTACTTATTTCTGATATTCTGGACAGTCCGAA GGCCAAGAAAATCGGTGAGGCAATCACTGCTATCGTCGTTCCTATCATTGTATTAGCGATTGCTGCGGGTCTTATTGCAG GGGCTTTCGTTGCCTCTAGTGGGACGATGTTAGTCTTTGCCAACCCTATGTTTGTCATGGGATTGATTACGGTGGGGCTA TACTTCATGTCCTTGAATAAGCTCACCTTAGATTATTTCCGTAGGGAACACCTCTTGAGGATGGAAAAGAAAACCCAAGA GACCGCGGAGCCTATTCTAGTGACTCCATCCGCCGACGATGCAAAAAAAATCGCAGTGGAAAAGAAAAAAGATCTTTCTG CATCTGCCCGCATGGAGGAACACGAAGCTTCACAACGCCAAGATGCCCGTCATCGTAGGATCGGTCGGGAGGCTCAAGGA TCTTTCTTCTATTCGTCACGAAATCCTGAGCATAGACGCTCCTTCGGCAGCCTCTCACGTTTTAAAACAAAACCCTCAGA TGCGGCTTCTACACGACCCGCATCTATAAGTCCTCCATTTAAGGACGATTTTCAGCCTTATCACTTCAAAGATTTAAGAA GCAGTTCATTCGGTAGTGGAGCGAGCAGTGCGTTTACACCCATAATGCCTGCAAGTTCCCGCTCTCCTAATTTCTCCACG GGGACGGTTCTACACCCTGAGCCGGTCTACCCTAAGGGAGGAAAAGAACCCTCAATTCCTCGAGTTTCTTCATCTTCCCG CCGTTCCCCTCGTGATCGCCAAGATAAACAGCAGCAACAGCAAAATCAAGATGAAGAACAGAAACAGCAATCTAAGAAGA AAAGCGGGAAATCGAATCAATCTCTTAAAACTCCGCCTCCAGACGGAAAAAGCACGGCTAACCTCAGCCCCTCCAATCCA TTCTCTGACGGTTATGACGAAAGAGAAAAACGGAAACACAGAAAGAACAAATAA
Upstream 100 bases:
>100_bases AAGAGAACTAACTAAATCCTATTAAATCTTATAATAGTATGAAATATATCCTATGAATGAAAATTCATGGGCCTAATGAT AATTACAGTAAGTTGATAGT
Downstream 100 bases:
>100_bases GGATCCGTGGTTTAGATAACCATCTTCCTTACTCTCTCCTTCTAAAATTCAAGAAGGTCTAAAAGCAAAACCGCTTGTAC ACCTTCTCCCCTACCCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGIIALAAIAILSILLTASGNSLM LYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVVPIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGL YFMSLNKLTLDYFRREHLLRMEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSGASSAFTPIMPASSRSPNFST GTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQQNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNP FSDGYDEREKRKHRKNK
Sequences:
>Translated_417_residues MSQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGIIALAAIAILSILLTASGNSLM LYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVVPIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGL YFMSLNKLTLDYFRREHLLRMEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSGASSAFTPIMPASSRSPNFST GTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQQNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNP FSDGYDEREKRKHRKNK >Mature_416_residues SQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGIIALAAIAILSILLTASGNSLML YALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVVPIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGLY FMSLNKLTLDYFRREHLLRMEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQGS FFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSGASSAFTPIMPASSRSPNFSTG TVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQQNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNPF SDGYDEREKRKHRKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0443/CT_005/TC_0273 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y443_CHLPN (Q9Z8A0)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: A72078 - PIR: A86546 - PIR: B81590 - RefSeq: NP_224643.1 - RefSeq: NP_300500.1 - RefSeq: NP_444859.1 - RefSeq: NP_876733.1 - ProteinModelPortal: Q9Z8A0 - GeneID: 1467140 - GeneID: 894892 - GeneID: 919177 - GeneID: 962881 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0310 - KEGG: cpj:CPj0443 - KEGG: cpn:CPn0443 - KEGG: cpt:CpB0459 - TIGR: CP_0310 - OMA: MEEHEAS - ProtClustDB: CLSK871129 - BioCyc: CPNE115711:CP_0310-MONOMER - BioCyc: CPNE115713:CPN0443-MONOMER - BioCyc: CPNE138677:CPJ0443-MONOMER - BioCyc: CPNE182082:CPB0459-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45558; Mature: 45426
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc670fc4)-; HASH(0xcc5c0f0)-; HASH(0xd02b328)-; HASH(0xcb18e18)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGII CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHH ALAAIAILSILLTASGNSLMLYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVV HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH PIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGLYFMSLNKLTLDYFRREHLLR HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG HHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSG CEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC ASSAFTPIMPASSRSPNFSTGTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQ CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNPFSDGYDEREKRKHRKNK HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH >Mature Secondary Structure SQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGII CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHH ALAAIAILSILLTASGNSLMLYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVV HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH PIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGLYFMSLNKLTLDYFRREHLLR HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG HHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSG CEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC ASSAFTPIMPASSRSPNFSTGTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQ CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNPFSDGYDEREKRKHRKNK HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362