Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835976

GI number: 15835976

Start: 488439

End: 489692

Strand: Direct

Name: Not Available

Synonym: CPj0443

Alternate gene names: NA

Gene position: 488439-489692 (Clockwise)

Preceding gene: 15835975

Following gene: 15835977

Centisome position: 39.82

GC content: 46.89

Gene sequence:

>1254_bases
ATGAGCCAACCCCCTATAAACCCTTTAGGTCAACCTCAAGTTCCTGCAGCAGCATCCCCATCAGGGCAGCCAAGCGTGGT
AAAACGTTTAAAAACGTCATCCACAGGGTTATTCAAAAGATTTATTACTGTTCCTGATAAATATCCTAAAATGCGCTATG
TCTATGACACAGGCATTATTGCCCTTGCGGCAATTGCGATCCTTTCGATTCTCCTGACTGCTTCAGGAAACAGCCTTATG
CTTTATGCTCTCGCTCCGGCACTTGCCCTGGGAGCTTTGGGAGTTACTCTACTTATTTCTGATATTCTGGACAGTCCGAA
GGCCAAGAAAATCGGTGAGGCAATCACTGCTATCGTCGTTCCTATCATTGTATTAGCGATTGCTGCGGGTCTTATTGCAG
GGGCTTTCGTTGCCTCTAGTGGGACGATGTTAGTCTTTGCCAACCCTATGTTTGTCATGGGATTGATTACGGTGGGGCTA
TACTTCATGTCCTTGAATAAGCTCACCTTAGATTATTTCCGTAGGGAACACCTCTTGAGGATGGAAAAGAAAACCCAAGA
GACCGCGGAGCCTATTCTAGTGACTCCATCCGCCGACGATGCAAAAAAAATCGCAGTGGAAAAGAAAAAAGATCTTTCTG
CATCTGCCCGCATGGAGGAACACGAAGCTTCACAACGCCAAGATGCCCGTCATCGTAGGATCGGTCGGGAGGCTCAAGGA
TCTTTCTTCTATTCGTCACGAAATCCTGAGCATAGACGCTCCTTCGGCAGCCTCTCACGTTTTAAAACAAAACCCTCAGA
TGCGGCTTCTACACGACCCGCATCTATAAGTCCTCCATTTAAGGACGATTTTCAGCCTTATCACTTCAAAGATTTAAGAA
GCAGTTCATTCGGTAGTGGAGCGAGCAGTGCGTTTACACCCATAATGCCTGCAAGTTCCCGCTCTCCTAATTTCTCCACG
GGGACGGTTCTACACCCTGAGCCGGTCTACCCTAAGGGAGGAAAAGAACCCTCAATTCCTCGAGTTTCTTCATCTTCCCG
CCGTTCCCCTCGTGATCGCCAAGATAAACAGCAGCAACAGCAAAATCAAGATGAAGAACAGAAACAGCAATCTAAGAAGA
AAAGCGGGAAATCGAATCAATCTCTTAAAACTCCGCCTCCAGACGGAAAAAGCACGGCTAACCTCAGCCCCTCCAATCCA
TTCTCTGACGGTTATGACGAAAGAGAAAAACGGAAACACAGAAAGAACAAATAA

Upstream 100 bases:

>100_bases
AAGAGAACTAACTAAATCCTATTAAATCTTATAATAGTATGAAATATATCCTATGAATGAAAATTCATGGGCCTAATGAT
AATTACAGTAAGTTGATAGT

Downstream 100 bases:

>100_bases
GGATCCGTGGTTTAGATAACCATCTTCCTTACTCTCTCCTTCTAAAATTCAAGAAGGTCTAAAAGCAAAACCGCTTGTAC
ACCTTCTCCCCTACCCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGIIALAAIAILSILLTASGNSLM
LYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVVPIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGL
YFMSLNKLTLDYFRREHLLRMEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG
SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSGASSAFTPIMPASSRSPNFST
GTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQQNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNP
FSDGYDEREKRKHRKNK

Sequences:

>Translated_417_residues
MSQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGIIALAAIAILSILLTASGNSLM
LYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVVPIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGL
YFMSLNKLTLDYFRREHLLRMEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG
SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSGASSAFTPIMPASSRSPNFST
GTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQQNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNP
FSDGYDEREKRKHRKNK
>Mature_416_residues
SQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGIIALAAIAILSILLTASGNSLML
YALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVVPIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGLY
FMSLNKLTLDYFRREHLLRMEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQGS
FFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSGASSAFTPIMPASSRSPNFSTG
TVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQQNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNPF
SDGYDEREKRKHRKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_0443/CT_005/TC_0273 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y443_CHLPN (Q9Z8A0)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A72078
- PIR:   A86546
- PIR:   B81590
- RefSeq:   NP_224643.1
- RefSeq:   NP_300500.1
- RefSeq:   NP_444859.1
- RefSeq:   NP_876733.1
- ProteinModelPortal:   Q9Z8A0
- GeneID:   1467140
- GeneID:   894892
- GeneID:   919177
- GeneID:   962881
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0310
- KEGG:   cpj:CPj0443
- KEGG:   cpn:CPn0443
- KEGG:   cpt:CpB0459
- TIGR:   CP_0310
- OMA:   MEEHEAS
- ProtClustDB:   CLSK871129
- BioCyc:   CPNE115711:CP_0310-MONOMER
- BioCyc:   CPNE115713:CPN0443-MONOMER
- BioCyc:   CPNE138677:CPJ0443-MONOMER
- BioCyc:   CPNE182082:CPB0459-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45558; Mature: 45426

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc670fc4)-; HASH(0xcc5c0f0)-; HASH(0xd02b328)-; HASH(0xcb18e18)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGII
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHH
ALAAIAILSILLTASGNSLMLYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVV
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGLYFMSLNKLTLDYFRREHLLR
HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG
HHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC
SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSG
CEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
ASSAFTPIMPASSRSPNFSTGTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQ
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNPFSDGYDEREKRKHRKNK
HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH
>Mature Secondary Structure 
SQPPINPLGQPQVPAAASPSGQPSVVKRLKTSSTGLFKRFITVPDKYPKMRYVYDTGII
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHH
ALAAIAILSILLTASGNSLMLYALAPALALGALGVTLLISDILDSPKAKKIGEAITAIVV
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PIIVLAIAAGLIAGAFVASSGTMLVFANPMFVMGLITVGLYFMSLNKLTLDYFRREHLLR
HHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEKKTQETAEPILVTPSADDAKKIAVEKKKDLSASARMEEHEASQRQDARHRRIGREAQG
HHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCC
SFFYSSRNPEHRRSFGSLSRFKTKPSDAASTRPASISPPFKDDFQPYHFKDLRSSSFGSG
CEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
ASSAFTPIMPASSRSPNFSTGTVLHPEPVYPKGGKEPSIPRVSSSSRRSPRDRQDKQQQQ
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
QNQDEEQKQQSKKKSGKSNQSLKTPPPDGKSTANLSPSNPFSDGYDEREKRKHRKNK
HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362