| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is mutY
Identifier: 15835935
GI number: 15835935
Start: 447594
End: 448703
Strand: Reverse
Name: mutY
Synonym: CPj0402
Alternate gene names: 15835935
Gene position: 448703-447594 (Counterclockwise)
Preceding gene: 15835937
Following gene: 15835934
Centisome position: 36.58
GC content: 40.81
Gene sequence:
>1110_bases ATGACAAAGATAGCTTTTTCTGAAAAGGCAAAGAATTTTCCTGTAGAGGCATTAAAAAAATGGTTTGAAAAAAATAAACG ATCTCTTCCTTGGAGAGATAACCCGACTCCCTATAGTGTGTGGGTTTCCGAAGTTATGCTACAGCAAACGCGAGCTGAAG TTGTTATAGATTATTTTAATCAGTGGATGGAGAGATTTCCTACCATAGAGTCTTTAGCTGCAGCAAAAGAAGAAGATGTC ATTAAGTTATGGGAGGGATTGGGTTATTATTCTCGAGCGCGCCATCTTTTAGAGGGAGCTCGCATGGTTATGGAGGAGTT TCATGGAAAGATCCCTGATGATGCCATTTCCTTAGCTCAAATTCGTGGAGTTGGTCCTTATACGGTTCATGCTATTCTAG CCTTTGCTTTTAAGAGGCGTGCTGCTGCTGTGGATGGCAATGTCTTGCGTGTTCTTAGCCGGATATTTTTGATAGAAACT TCTATAGACTTAGAATCAACTCGTACTTGGGTTTCTAGGATTGCTCAAGCGCTTCTTCCTCATAAGAGTCCCGAGGTTAT AGCTGAGGCTCTGATAGAGTTGGGAGCTTGTATCTGTAAAAAAGTTCCTCAATGTCATCGTTGTCCTGTCCGTCAAGCAT GTGGAGCTTGGAGGGAGAACAAACAGTTCGTATTGCCGGTACGTCATGCCAGAAAAAAGGTCATCTTTTTGCATCGTTTG GTAGCGATTGTATTGTACGATGGCTCTTTGGTTGTCGAGAAGAGACGTCCTAAAGAAATGATGGCAGGCTTATATGAATT TCCTTATATTGAAGTTGAACCAGAGGAAGGTCTTCAAGATATAGAAGGATTTACTAAGAAGATGGAGCTTTCTTTAGAAA GCCCTTTGGAATTCTTAGGTAACCTTAAAGAACAGCGGCATGCGTTTACTAATCATAAGGTTCATTTGTGTCCTATAATT TTTAAAGCCACTTCTCTGCCTCAGTTCGGGGAATTGCATCTTTTGAGTGATATAGATCACTTAGCTTTTTCTTCAGGACA CAAAAAGATTAAAGATGCTTTGCTAATCTACCTCGGGGATGTCAGGTCTAGAGAATCAATAGGAGTATAG
Upstream 100 bases:
>100_bases CTTGAGACTTGTGTGGCAAGCCAGGAAAAATTTTCCATAAAATATTGTAAAGCAGCCCTTTTATCATTTGATAATTGCAT AAAATTTTAAGAGATTTTGT
Downstream 100 bases:
>100_bases ATGCGAGATCACGCTTTTTCTAAATTGATAGGGACTGTCCGTGCCATGGTAGTTGAAGGACGTTGTCCTTGGTCACTTCA GCAATCCCTAGTCTCTATGG
Product: adenine glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTKIAFSEKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQTRAEVVIDYFNQWMERFPTIESLAAAKEEDV IKLWEGLGYYSRARHLLEGARMVMEEFHGKIPDDAISLAQIRGVGPYTVHAILAFAFKRRAAAVDGNVLRVLSRIFLIET SIDLESTRTWVSRIAQALLPHKSPEVIAEALIELGACICKKVPQCHRCPVRQACGAWRENKQFVLPVRHARKKVIFLHRL VAIVLYDGSLVVEKRRPKEMMAGLYEFPYIEVEPEEGLQDIEGFTKKMELSLESPLEFLGNLKEQRHAFTNHKVHLCPII FKATSLPQFGELHLLSDIDHLAFSSGHKKIKDALLIYLGDVRSRESIGV
Sequences:
>Translated_369_residues MTKIAFSEKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQTRAEVVIDYFNQWMERFPTIESLAAAKEEDV IKLWEGLGYYSRARHLLEGARMVMEEFHGKIPDDAISLAQIRGVGPYTVHAILAFAFKRRAAAVDGNVLRVLSRIFLIET SIDLESTRTWVSRIAQALLPHKSPEVIAEALIELGACICKKVPQCHRCPVRQACGAWRENKQFVLPVRHARKKVIFLHRL VAIVLYDGSLVVEKRRPKEMMAGLYEFPYIEVEPEEGLQDIEGFTKKMELSLESPLEFLGNLKEQRHAFTNHKVHLCPII FKATSLPQFGELHLLSDIDHLAFSSGHKKIKDALLIYLGDVRSRESIGV >Mature_368_residues TKIAFSEKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQTRAEVVIDYFNQWMERFPTIESLAAAKEEDVI KLWEGLGYYSRARHLLEGARMVMEEFHGKIPDDAISLAQIRGVGPYTVHAILAFAFKRRAAAVDGNVLRVLSRIFLIETS IDLESTRTWVSRIAQALLPHKSPEVIAEALIELGACICKKVPQCHRCPVRQACGAWRENKQFVLPVRHARKKVIFLHRLV AIVLYDGSLVVEKRRPKEMMAGLYEFPYIEVEPEEGLQDIEGFTKKMELSLESPLEFLGNLKEQRHAFTNHKVHLCPIIF KATSLPQFGELHLLSDIDHLAFSSGHKKIKDALLIYLGDVRSRESIGV
Specific function: Involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine, 8- oxo-dGTP) from DNA and the nucleotide pool. 8-oxo-dGTP is inserted opposite dA and dC residues of template DNA with almost equal effici
COG id: COG1194
COG function: function code L; A/G-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HhH domain [H]
Homologues:
Organism=Homo sapiens, GI115298648, Length=355, Percent_Identity=34.6478873239437, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI6912520, Length=355, Percent_Identity=34.6478873239437, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI115298650, Length=355, Percent_Identity=34.6478873239437, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI190358497, Length=355, Percent_Identity=34.6478873239437, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI115298654, Length=355, Percent_Identity=34.6478873239437, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI115298652, Length=355, Percent_Identity=34.6478873239437, Blast_Score=177, Evalue=1e-44, Organism=Escherichia coli, GI1789331, Length=320, Percent_Identity=30.9375, Blast_Score=171, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011257 - InterPro: IPR003651 - InterPro: IPR003265 - InterPro: IPR023170 - InterPro: IPR005760 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00730 HhH-GPD [H]
EC number: 3.2.2.-
Molecular weight: Translated: 42273; Mature: 42142
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIAFSEKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQTRAEVVIDYFN CCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QWMERFPTIESLAAAKEEDVIKLWEGLGYYSRARHLLEGARMVMEEFHGKIPDDAISLAQ HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IRGVGPYTVHAILAFAFKRRAAAVDGNVLRVLSRIFLIETSIDLESTRTWVSRIAQALLP HCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC HKSPEVIAEALIELGACICKKVPQCHRCPVRQACGAWRENKQFVLPVRHARKKVIFLHRL CCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCHHCCCCEEEEHHHHHHHHHHHHHH VAIVLYDGSLVVEKRRPKEMMAGLYEFPYIEVEPEEGLQDIEGFTKKMELSLESPLEFLG HHHHHCCCCEEEECCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCHHHHHHHHH NLKEQRHAFTNHKVHLCPIIFKATSLPQFGELHLLSDIDHLAFSSGHKKIKDALLIYLGD HHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC VRSRESIGV CCCCCCCCC >Mature Secondary Structure TKIAFSEKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQTRAEVVIDYFN CCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QWMERFPTIESLAAAKEEDVIKLWEGLGYYSRARHLLEGARMVMEEFHGKIPDDAISLAQ HHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IRGVGPYTVHAILAFAFKRRAAAVDGNVLRVLSRIFLIETSIDLESTRTWVSRIAQALLP HCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC HKSPEVIAEALIELGACICKKVPQCHRCPVRQACGAWRENKQFVLPVRHARKKVIFLHRL CCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCHHCCCCEEEEHHHHHHHHHHHHHH VAIVLYDGSLVVEKRRPKEMMAGLYEFPYIEVEPEEGLQDIEGFTKKMELSLESPLEFLG HHHHHCCCCEEEECCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHCHHHHHHHHH NLKEQRHAFTNHKVHLCPIIFKATSLPQFGELHLLSDIDHLAFSSGHKKIKDALLIYLGD HHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC VRSRESIGV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: 4Fe-4S Cluster [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Glycosylases; Hydrolysing N-glycosyl compounds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]