| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835933
GI number: 15835933
Start: 446245
End: 447018
Strand: Direct
Name: Not Available
Synonym: CPj0400
Alternate gene names: NA
Gene position: 446245-447018 (Clockwise)
Preceding gene: 15835932
Following gene: 15835936
Centisome position: 36.38
GC content: 41.21
Gene sequence:
>774_bases ATGTCCAAGTTTATTCTTCTCTTGTCCCTTGGCGTCGCTGCTCTAGCTTCCAAAAACTTCTTTATCTGGCCAGCACCCTC TGGGAAAACACCTTTAAAGCTCCGCCAAGTTTTATTTGGTGGTGCTCTTCTTGTTTTTTCTTCCCTTGTAGCTCTTAGCG TGAGCTCACAAACTGCGGAATTACTTTCCACCATGACAGGAATTAGCCTTGCCTTTGCATTTCTGTTCTACCTGCTTTTT CTCCCCAAGGATATCACACGTGCTATACTTTTCTCTGGAGAAAGACCGGTTAAAACTTCATGGCGTGCTCTAGGATCTGC CATCAGAATGTGGATCATCATCATCCCAGTAACACAACTGATTGGGATTATGATGAGTAAATTTTTAACTTTGGTTCTTC CTACGCAAGAGATTCACACACAAGAAGTCACTCAAGAAGTTCAGAACTCTCTGCCTATAACAGGACACTACATTAGCATG ATTCTAAATTTAGGCGTCCTCACTCCATTTGGAGAAGAGGTATTTTTTAGAGGAATTCTACAGACATTCTTGAAAAACAA AATGACGCGCATAGCTGCGGTACTATGCTCTTCTATTATTTTCTCTTTCATTCACATTGAACACTCTTTAGGAAGTTGGG TCTTTGTCCCCGTGCTCTTTGTTTTTTCCTTATCTGCAGGGTTTCTATATGAAAAAGATCGGCACATTCTTTCTCCCATT GCACTGCACGGGTTGTTTAACCTCACCTCATTGCTATTTTTGGGAATAAAGTAA
Upstream 100 bases:
>100_bases TGATTCAACGCCCATGGGCTTAATGCATAGCCGTCTTTTCCGCGAAGTTGTTGCCAGAGTTGAGGGCTATGTTTGTGCTA ACTACTCGTAGTCTAAGGAA
Downstream 100 bases:
>100_bases AAAGAGTAAGTTGGAGAACATTCTTTTAGCAAAAGAAAACTCTCCTTAGGGCTGCTACCTTCCAGTCCTGACCCGATTCG CAGGTTCCTTCTCTTAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSKFILLLSLGVAALASKNFFIWPAPSGKTPLKLRQVLFGGALLVFSSLVALSVSSQTAELLSTMTGISLAFAFLFYLLF LPKDITRAILFSGERPVKTSWRALGSAIRMWIIIIPVTQLIGIMMSKFLTLVLPTQEIHTQEVTQEVQNSLPITGHYISM ILNLGVLTPFGEEVFFRGILQTFLKNKMTRIAAVLCSSIIFSFIHIEHSLGSWVFVPVLFVFSLSAGFLYEKDRHILSPI ALHGLFNLTSLLFLGIK
Sequences:
>Translated_257_residues MSKFILLLSLGVAALASKNFFIWPAPSGKTPLKLRQVLFGGALLVFSSLVALSVSSQTAELLSTMTGISLAFAFLFYLLF LPKDITRAILFSGERPVKTSWRALGSAIRMWIIIIPVTQLIGIMMSKFLTLVLPTQEIHTQEVTQEVQNSLPITGHYISM ILNLGVLTPFGEEVFFRGILQTFLKNKMTRIAAVLCSSIIFSFIHIEHSLGSWVFVPVLFVFSLSAGFLYEKDRHILSPI ALHGLFNLTSLLFLGIK >Mature_256_residues SKFILLLSLGVAALASKNFFIWPAPSGKTPLKLRQVLFGGALLVFSSLVALSVSSQTAELLSTMTGISLAFAFLFYLLFL PKDITRAILFSGERPVKTSWRALGSAIRMWIIIIPVTQLIGIMMSKFLTLVLPTQEIHTQEVTQEVQNSLPITGHYISMI LNLGVLTPFGEEVFFRGILQTFLKNKMTRIAAVLCSSIIFSFIHIEHSLGSWVFVPVLFVFSLSAGFLYEKDRHILSPIA LHGLFNLTSLLFLGIK
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28510; Mature: 28378
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFILLLSLGVAALASKNFFIWPAPSGKTPLKLRQVLFGGALLVFSSLVALSVSSQTAE CCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSTMTGISLAFAFLFYLLFLPKDITRAILFSGERPVKTSWRALGSAIRMWIIIIPVTQL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGIMMSKFLTLVLPTQEIHTQEVTQEVQNSLPITGHYISMILNLGVLTPFGEEVFFRGIL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QTFLKNKMTRIAAVLCSSIIFSFIHIEHSLGSWVFVPVLFVFSLSAGFLYEKDRHILSPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHCCHHHHHHH ALHGLFNLTSLLFLGIK HHHHHHHHHHHHHHCCC >Mature Secondary Structure SKFILLLSLGVAALASKNFFIWPAPSGKTPLKLRQVLFGGALLVFSSLVALSVSSQTAE CHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSTMTGISLAFAFLFYLLFLPKDITRAILFSGERPVKTSWRALGSAIRMWIIIIPVTQL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGIMMSKFLTLVLPTQEIHTQEVTQEVQNSLPITGHYISMILNLGVLTPFGEEVFFRGIL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QTFLKNKMTRIAAVLCSSIIFSFIHIEHSLGSWVFVPVLFVFSLSAGFLYEKDRHILSPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHCCHHHHHHH ALHGLFNLTSLLFLGIK HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA