| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835914
GI number: 15835914
Start: 427743
End: 429518
Strand: Reverse
Name: Not Available
Synonym: CPj0381
Alternate gene names: NA
Gene position: 429518-427743 (Counterclockwise)
Preceding gene: 15835915
Following gene: 15835911
Centisome position: 35.02
GC content: 44.54
Gene sequence:
>1776_bases ATGACAGCACCCACAGAATCTCGATCTTCACCACCAACACTACTCGAAGAAACGGAACCTCTATCCCCAAATCCTATTCC CGCCGATATCCAAATCCCGAGAATTACAATATCTCCTCCTTCTCTAGACGTATCAACAGTTGCATCTTCGGCTGAAGATA TCTCGGTCTTCATTGCAGGAGGCCCTAGAAGTTCTTCATCTGCTTCTGTGGCTTCGGATGTGTATGAGTTGGTTTGCCTT TGTGGCGGTGATGAGGATCCTGAGCCCCCAGATTCTGAGGTACGTACTCTCTATGTAAATGGAAGTTGGCAAACGCATCA AGAAGCTGTACAGGAATTGCTGTATATTAGTGAAGTACGGGGAGAGGCCGTTCGTCTTCTCTATAACGATGGAAGCGGCA TGTCTCCTTGGCCCATCAGTCCTTGTCGTACTCTTCCTACTCTCGATCATCCTTTATGTCAGGCCCTTTTGACGGTTTGG GAACAGTTTTTCTCTGCTCCTGAAAATCAGCATCGTGAGTTTCTAGTGATTTTCTATGGGGATGCATCGCCTTATATACA ACAGGCGTTAACGCAATCTAGGCATAGTCCACGTATTGTTGTTGTAGGGATTTCCCCGACGGTCTTTATTCAAGGAGACT TTAGGGTCCATAATTACCGTGTTTCTGGAGACTTCTTTAGTTCTCTGGATTGTCGGGGAACTAGGGCGGAGAACACCACG ATACTGCCGTATTCTTCGGGTCTTGAGGGTGTTTTTCTGCCTTCTATCCGTTGTCCTTCTTTTACTTGGGCGGTGCGTTT TGGAGAGCAATGCTTGGTTGCGAATAGGGGTGAGGATGTAGAAGATAGGGGAGGTCTTTCTCAAGATGCCGAAAGATCAC AGTTACCACACAGTGAAAGAGATCTAGCTGTTGTCATTGATTCTACGGATCCTAGTTCTATGAGTAGGCTTGTAGAATGG TTGAATCAAGGATCGCCTTCATCAGATATGGAAATCAATCCCTATCCCCAACGGTGTCCTGATGTAGCTCTTTCTGCGCT TTATGCAATTTCTAGAGTTTCAGGACTTGCGCAGGAATGGATCCTAGCCTCTGTTCATGAGGGCTTAGACTTGCAGATCT GTTACTCTTTAATTTTGATGCACACGACGTTTGCGGTCCGGTATTTTTTCTTACTCTTTACAAATTATCCTCAGTCTAGA GAGAGATTCCGTACTGCACGAATCGTAGCACAATCTCTATATTTACCAAGCATCCTTGTTCTTGTTTTTGATTGTGGCAA CGTCCTGCGTAAACTATGGATGCCTCAGGAAATCTTACGAGCAATTTTTATTTCTGCGTCTACAATTTCAGGGAGTATTG TCTTTGTAGAGTGCACTCGCTGGATGGGGCGAGGTCTTAGACATCGTGTACAACAATTTGTGCAGCAACGAGTTATAGGA AGTGGCCTGCCTGTAGGAACAGTACGAGCTTCTTATCGCGATCGTGCAGGCTTTATCATAGGCTTTTTACAAACTGTACA TGGAGGACTTTATTTGCCGGTATCCATTATGGTGCTTAACCAGATTGCAATACAAGTTCCACGTATCTTAGTACGTCCAA ATAACACTGCTGTTTATGATCTACATAATAAAAGTGCTGAAGAAAATTGGAGCAGTGGTGATGTATTAGCTGTTGGCCAA ACATTAAACTTCATCTTATGTGCTTTCGTCTTGTTCGTAAATCTATGGTTCTTTGTGAAGTCCGTATTACGCCATTCTAG GCGTCGTCGTCGCTAA
Upstream 100 bases:
>100_bases CATAATCATAGGTTTGCGTCTTTTTAAAATAATCGTAATCCTCTATTGCGTGTTATCAATACTTATTTTATAATCTTTGC CAAATAAGTTTAGAGCGTTG
Downstream 100 bases:
>100_bases TGTATCTTTGGAGACATCTTGGTATTTTTAACATAAGAGCACGGCAAAAAAAAGAAAGACCGAGAAAGAAGCTTTACCTT TAAGAGTTCTCTGATGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTAPTESRSSPPTLLEETEPLSPNPIPADIQIPRITISPPSLDVSTVASSAEDISVFIAGGPRSSSSASVASDVYELVCL CGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYNDGSGMSPWPISPCRTLPTLDHPLCQALLTVW EQFFSAPENQHREFLVIFYGDASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLDCRGTRAENTT ILPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDSTDPSSMSRLVEW LNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGLDLQICYSLILMHTTFAVRYFFLLFTNYPQSR ERFRTARIVAQSLYLPSILVLVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRVQQFVQQRVIG SGLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEENWSSGDVLAVGQ TLNFILCAFVLFVNLWFFVKSVLRHSRRRRR
Sequences:
>Translated_591_residues MTAPTESRSSPPTLLEETEPLSPNPIPADIQIPRITISPPSLDVSTVASSAEDISVFIAGGPRSSSSASVASDVYELVCL CGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYNDGSGMSPWPISPCRTLPTLDHPLCQALLTVW EQFFSAPENQHREFLVIFYGDASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLDCRGTRAENTT ILPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDSTDPSSMSRLVEW LNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGLDLQICYSLILMHTTFAVRYFFLLFTNYPQSR ERFRTARIVAQSLYLPSILVLVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRVQQFVQQRVIG SGLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEENWSSGDVLAVGQ TLNFILCAFVLFVNLWFFVKSVLRHSRRRRR >Mature_590_residues TAPTESRSSPPTLLEETEPLSPNPIPADIQIPRITISPPSLDVSTVASSAEDISVFIAGGPRSSSSASVASDVYELVCLC GGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVRGEAVRLLYNDGSGMSPWPISPCRTLPTLDHPLCQALLTVWE QFFSAPENQHREFLVIFYGDASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLDCRGTRAENTTI LPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSERDLAVVIDSTDPSSMSRLVEWL NQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEWILASVHEGLDLQICYSLILMHTTFAVRYFFLLFTNYPQSRE RFRTARIVAQSLYLPSILVLVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRVQQFVQQRVIGS GLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYDLHNKSAEENWSSGDVLAVGQT LNFILCAFVLFVNLWFFVKSVLRHSRRRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65965; Mature: 65834
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTESRSSPPTLLEETEPLSPNPIPADIQIPRITISPPSLDVSTVASSAEDISVFIAG CCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEECEEEECCCCCCHHHHHCCCCCEEEEEEC GPRSSSSASVASDVYELVCLCGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVR CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC GEAVRLLYNDGSGMSPWPISPCRTLPTLDHPLCQALLTVWEQFFSAPENQHREFLVIFYG CCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC DASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLDCRGTRAENTT CCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECEEEEEEEECCCHHCCCCCCCCCCCCCE ILPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSER EEEECCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCCHHCCCCCCCCHHHHCCCCCC DLAVVIDSTDPSSMSRLVEWLNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEW CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILASVHEGLDLQICYSLILMHTTFAVRYFFLLFTNYPQSRERFRTARIVAQSLYLPSILV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRVQQFVQQRVIG HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC SGLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYD CCCCCHHHHHCHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCEEEECCCCCEEEE LHNKSAEENWSSGDVLAVGQTLNFILCAFVLFVNLWFFVKSVLRHSRRRRR ECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAPTESRSSPPTLLEETEPLSPNPIPADIQIPRITISPPSLDVSTVASSAEDISVFIAG CCCCCCCCCCCCHHCCCCCCCCCCCCCCEEECEEEECCCCCCHHHHHCCCCCEEEEEEC GPRSSSSASVASDVYELVCLCGGDEDPEPPDSEVRTLYVNGSWQTHQEAVQELLYISEVR CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC GEAVRLLYNDGSGMSPWPISPCRTLPTLDHPLCQALLTVWEQFFSAPENQHREFLVIFYG CCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC DASPYIQQALTQSRHSPRIVVVGISPTVFIQGDFRVHNYRVSGDFFSSLDCRGTRAENTT CCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECEEEEEEEECCCHHCCCCCCCCCCCCCE ILPYSSGLEGVFLPSIRCPSFTWAVRFGEQCLVANRGEDVEDRGGLSQDAERSQLPHSER EEEECCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCCHHCCCCCCCCHHHHCCCCCC DLAVVIDSTDPSSMSRLVEWLNQGSPSSDMEINPYPQRCPDVALSALYAISRVSGLAQEW CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILASVHEGLDLQICYSLILMHTTFAVRYFFLLFTNYPQSRERFRTARIVAQSLYLPSILV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LVFDCGNVLRKLWMPQEILRAIFISASTISGSIVFVECTRWMGRGLRHRVQQFVQQRVIG HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC SGLPVGTVRASYRDRAGFIIGFLQTVHGGLYLPVSIMVLNQIAIQVPRILVRPNNTAVYD CCCCCHHHHHCHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCEEEECCCCCEEEE LHNKSAEENWSSGDVLAVGQTLNFILCAFVLFVNLWFFVKSVLRHSRRRRR ECCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA