Click here to switch to the map view.

The map label for this gene is fer4

Identifier: 15835897

GI number: 15835897

Start: 409675

End: 409950

Strand: Direct

Name: fer4

Synonym: CPj0364

Alternate gene names: 15835897

Gene position: 409675-409950 (Clockwise)

Preceding gene: 15835892

Following gene: 15835898

Centisome position: 33.4

GC content: 44.2

Gene sequence:

>276_bases
ATGGCCAAGCTAGTCATTACCTCTGATGATGAACAACAAGAGTTCGAGTTAGAAGACAATAGTGAGATCGCAGAGCCTTG
TGAATCCATGGGCATTCCCTTTGCTTGTACAGAAGGTGTCTGTGGAACTTGTGTGATAGAGGTCTTAGAAGGACGTGAGA
ATCTTTCTGAGTTTACGGAACCAGAATACGATTTTCTAGGAGAACCCGAAGACTCTAACGAACGTCTTGCTTGTCAGTGC
CGCATCAAAGGTGGCTGTGTCAAAGTTACTTTCTAA

Upstream 100 bases:

>100_bases
GGTTAGCGCGGTTGCTTTGGGAGCAATAGGTCGGGGGTTCGAATCCCTCTACTCCGAACTTCATTTTAATCTATCCGACA
ATACGTAGAAGGAAAACTCC

Downstream 100 bases:

>100_bases
TCTTAGAAAATAAAAATTTTATATTAATACAACTTCTATTCTGACGAACTCTTTTCTAAGTAGTTATGCGACTCTTTGCA
TTCAGGAAAGGCTTGATTTA

Product: ferredoxin IV

Products: NA

Alternate protein names: Ferredoxin IV; FdIV; Ferredoxin, plant-type [H]

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MAKLVITSDDEQQEFELEDNSEIAEPCESMGIPFACTEGVCGTCVIEVLEGRENLSEFTEPEYDFLGEPEDSNERLACQC
RIKGGCVKVTF

Sequences:

>Translated_91_residues
MAKLVITSDDEQQEFELEDNSEIAEPCESMGIPFACTEGVCGTCVIEVLEGRENLSEFTEPEYDFLGEPEDSNERLACQC
RIKGGCVKVTF
>Mature_90_residues
AKLVITSDDEQQEFELEDNSEIAEPCESMGIPFACTEGVCGTCVIEVLEGRENLSEFTEPEYDFLGEPEDSNERLACQCR
IKGGCVKVTF

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin is required for nitrogen fixation [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 10104; Mature: 9973

Theoretical pI: Translated: 3.67; Mature: 3.67

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLVITSDDEQQEFELEDNSEIAEPCESMGIPFACTEGVCGTCVIEVLEGRENLSEFTE
CCEEEEECCCCCCEECCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHCHHHHHHHCC
PEYDFLGEPEDSNERLACQCRIKGGCVKVTF
CCCCCCCCCCCCCCEEEEEEEECCCEEEEEC
>Mature Secondary Structure 
AKLVITSDDEQQEFELEDNSEIAEPCESMGIPFACTEGVCGTCVIEVLEGRENLSEFTE
CEEEEECCCCCCEECCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHCHHHHHHHCC
PEYDFLGEPEDSNERLACQCRIKGGCVKVTF
CCCCCCCCCCCCCCEEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2315024; 1847145; 8264535; 2071578 [H]