Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835887

GI number: 15835887

Start: 396875

End: 398218

Strand: Direct

Name: Not Available

Synonym: CPj0354

Alternate gene names: NA

Gene position: 396875-398218 (Clockwise)

Preceding gene: 15835886

Following gene: 15835892

Centisome position: 32.36

GC content: 37.8

Gene sequence:

>1344_bases
ATGAGTAATATAACCTCGCCAGTTATTCAAAATAATCGCTCTTGTAATTATTATTTTGAATTAAAGAATTCAACCACTAT
TCATATTGTTATCAGTGCCATCTTACTCTGCGGAGCTTTGATAGCTTTCTTGTGTGTAGCAGCTCCTGTTTCCTATATTC
TAAGTGGCGCATTGTTAGGATTAGGATTATTAATAGCCTTGATTGGTGTGATTTTAGGAATAAAAAAAATCACGCCTATG
ATTTCATCAAAAGAACAAGTATTCCCCCAAGAACTCGTAAATAGAATCAGGGCGCACTATCCTAAATTTGTCTCTGATTT
TGTTTCAGAAGCTAAACCAAATCTTAAAGATCTCATAAGTTTTATTGATCTTCTAAATCAATTGCACTCTGAAGTTGGAT
CATCTACAAATTACAACGTATCTGAAGAACTACAACAGAAAATAGATACGTTCGAGGGTATCGCACGCTTAAAAAATGAA
GTCCGTACTGCTTCTCTTAAAAGACTTGAAAGCGCTGCTTCTTCCCGTCCCCTCTTCCCCTCTTTACCAAAAATCTTACA
AAAGGTATTTCCATTTTTCTGGTTAGGAGAGTTTATTTCTGCAGGCAGCAAGGTTGTAGAGCTCCATCGAGTTAAGAAAA
TTGGAGGCAGCCTCGAAGAAGACCTTAGTGATTATATAAAACCAGAGATGCTTCCTACCTATTGGTTGATTCCTTTAGAT
TTTAGACCAACAAATTCCTCTATTCTAAATCTACACACATTAGTTTTAGCTAGAGTCTTAACTCGTGATGTTTTTCAACA
TCTTAAGTATGCAGCATTAAATGGCGAGTGGAACCTGAATCATAGTGATCTAAATACTATGAAACAGCAGCTCTTTGCTA
AATATCATGCGGCGTATCAATCCTATAAACATCTATCTCAACCCTCTCTTCAAGAGGATGAATTCTATAACCTGCTCTTG
TGTATTTTTAAGCATAGGTACTCGTGGAAGCAGATGTCCTTAATAAAAACAGTCCCGGCTGATTTATGGGAAAACCTCTG
TTGCTTGACTTTAGACCATACAGGACGACCCCAAGACATGGAATTTGCCTCTCTAATTGGTACTCTCTACACACAAGGCC
TAATTCATAAAGAAAGCGAAGCATTTCTTTCTTCATTGACACTCCTTAGTTTAGATCAGTTTAAAACGATCCGTCGTCAG
TCAACCAATATAGCGATGTTCCTTGAGAATTTAGCAACTCATAATTCCACCTTTAGAAGCTTACCACCTATAACAGTCCA
TCCACTCAAGAGAAGCGTCTTCTCCCAACCTGAAGAAGACGAGTCCTCCCTGCTGATAGGTTAG

Upstream 100 bases:

>100_bases
AACAATTTCAATAAAAATTTTAAAAATAAAAACATTTCTATTAATAGGATTTTTGTTAAATTTACGATATAATACGCAAA
TTGATGAGCCTAGGAAATGT

Downstream 100 bases:

>100_bases
AGATTTCTATTTTGGAATAAGAAAAATTCTACTCCCTCTCGTAGCCCCTTTCGAGACTAAAAAGCTAGTTACCTGGTTTA
GTCTTTAAAGAAGATACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLGLGLLIALIGVILGIKKITPM
ISSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLISFIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNE
VRTASLKRLESAASSRPLFPSLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLD
FRPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQSYKHLSQPSLQEDEFYNLLL
CIFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDMEFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQ
STNIAMFLENLATHNSTFRSLPPITVHPLKRSVFSQPEEDESSLLIG

Sequences:

>Translated_447_residues
MSNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLGLGLLIALIGVILGIKKITPM
ISSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLISFIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNE
VRTASLKRLESAASSRPLFPSLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLD
FRPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQSYKHLSQPSLQEDEFYNLLL
CIFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDMEFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQ
STNIAMFLENLATHNSTFRSLPPITVHPLKRSVFSQPEEDESSLLIG
>Mature_446_residues
SNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLGLGLLIALIGVILGIKKITPMI
SSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLISFIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNEV
RTASLKRLESAASSRPLFPSLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLDF
RPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQSYKHLSQPSLQEDEFYNLLLC
IFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDMEFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQS
TNIAMFLENLATHNSTFRSLPPITVHPLKRSVFSQPEEDESSLLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50619; Mature: 50488

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLG
CCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLIALIGVILGIKKITPMISSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLIS
HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNEVRTASLKRLESAASSRPLFP
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEE
FRPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SYKHLSQPSLQEDEFYNLLLCIFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDM
HHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCH
EFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQSTNIAMFLENLATHNSTFRS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHC
LPPITVHPLKRSVFSQPEEDESSLLIG
CCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLG
CCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA