| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835887
GI number: 15835887
Start: 396875
End: 398218
Strand: Direct
Name: Not Available
Synonym: CPj0354
Alternate gene names: NA
Gene position: 396875-398218 (Clockwise)
Preceding gene: 15835886
Following gene: 15835892
Centisome position: 32.36
GC content: 37.8
Gene sequence:
>1344_bases ATGAGTAATATAACCTCGCCAGTTATTCAAAATAATCGCTCTTGTAATTATTATTTTGAATTAAAGAATTCAACCACTAT TCATATTGTTATCAGTGCCATCTTACTCTGCGGAGCTTTGATAGCTTTCTTGTGTGTAGCAGCTCCTGTTTCCTATATTC TAAGTGGCGCATTGTTAGGATTAGGATTATTAATAGCCTTGATTGGTGTGATTTTAGGAATAAAAAAAATCACGCCTATG ATTTCATCAAAAGAACAAGTATTCCCCCAAGAACTCGTAAATAGAATCAGGGCGCACTATCCTAAATTTGTCTCTGATTT TGTTTCAGAAGCTAAACCAAATCTTAAAGATCTCATAAGTTTTATTGATCTTCTAAATCAATTGCACTCTGAAGTTGGAT CATCTACAAATTACAACGTATCTGAAGAACTACAACAGAAAATAGATACGTTCGAGGGTATCGCACGCTTAAAAAATGAA GTCCGTACTGCTTCTCTTAAAAGACTTGAAAGCGCTGCTTCTTCCCGTCCCCTCTTCCCCTCTTTACCAAAAATCTTACA AAAGGTATTTCCATTTTTCTGGTTAGGAGAGTTTATTTCTGCAGGCAGCAAGGTTGTAGAGCTCCATCGAGTTAAGAAAA TTGGAGGCAGCCTCGAAGAAGACCTTAGTGATTATATAAAACCAGAGATGCTTCCTACCTATTGGTTGATTCCTTTAGAT TTTAGACCAACAAATTCCTCTATTCTAAATCTACACACATTAGTTTTAGCTAGAGTCTTAACTCGTGATGTTTTTCAACA TCTTAAGTATGCAGCATTAAATGGCGAGTGGAACCTGAATCATAGTGATCTAAATACTATGAAACAGCAGCTCTTTGCTA AATATCATGCGGCGTATCAATCCTATAAACATCTATCTCAACCCTCTCTTCAAGAGGATGAATTCTATAACCTGCTCTTG TGTATTTTTAAGCATAGGTACTCGTGGAAGCAGATGTCCTTAATAAAAACAGTCCCGGCTGATTTATGGGAAAACCTCTG TTGCTTGACTTTAGACCATACAGGACGACCCCAAGACATGGAATTTGCCTCTCTAATTGGTACTCTCTACACACAAGGCC TAATTCATAAAGAAAGCGAAGCATTTCTTTCTTCATTGACACTCCTTAGTTTAGATCAGTTTAAAACGATCCGTCGTCAG TCAACCAATATAGCGATGTTCCTTGAGAATTTAGCAACTCATAATTCCACCTTTAGAAGCTTACCACCTATAACAGTCCA TCCACTCAAGAGAAGCGTCTTCTCCCAACCTGAAGAAGACGAGTCCTCCCTGCTGATAGGTTAG
Upstream 100 bases:
>100_bases AACAATTTCAATAAAAATTTTAAAAATAAAAACATTTCTATTAATAGGATTTTTGTTAAATTTACGATATAATACGCAAA TTGATGAGCCTAGGAAATGT
Downstream 100 bases:
>100_bases AGATTTCTATTTTGGAATAAGAAAAATTCTACTCCCTCTCGTAGCCCCTTTCGAGACTAAAAAGCTAGTTACCTGGTTTA GTCTTTAAAGAAGATACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLGLGLLIALIGVILGIKKITPM ISSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLISFIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNE VRTASLKRLESAASSRPLFPSLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLD FRPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQSYKHLSQPSLQEDEFYNLLL CIFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDMEFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQ STNIAMFLENLATHNSTFRSLPPITVHPLKRSVFSQPEEDESSLLIG
Sequences:
>Translated_447_residues MSNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLGLGLLIALIGVILGIKKITPM ISSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLISFIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNE VRTASLKRLESAASSRPLFPSLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLD FRPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQSYKHLSQPSLQEDEFYNLLL CIFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDMEFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQ STNIAMFLENLATHNSTFRSLPPITVHPLKRSVFSQPEEDESSLLIG >Mature_446_residues SNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLGLGLLIALIGVILGIKKITPMI SSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLISFIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNEV RTASLKRLESAASSRPLFPSLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLDF RPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQSYKHLSQPSLQEDEFYNLLLC IFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDMEFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQS TNIAMFLENLATHNSTFRSLPPITVHPLKRSVFSQPEEDESSLLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50619; Mature: 50488
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLG CCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLLIALIGVILGIKKITPMISSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLIS HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNEVRTASLKRLESAASSRPLFP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEE FRPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SYKHLSQPSLQEDEFYNLLLCIFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDM HHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCH EFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQSTNIAMFLENLATHNSTFRS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHC LPPITVHPLKRSVFSQPEEDESSLLIG CCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SNITSPVIQNNRSCNYYFELKNSTTIHIVISAILLCGALIAFLCVAAPVSYILSGALLG CCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLLIALIGVILGIKKITPMISSKEQVFPQELVNRIRAHYPKFVSDFVSEAKPNLKDLIS HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FIDLLNQLHSEVGSSTNYNVSEELQQKIDTFEGIARLKNEVRTASLKRLESAASSRPLFP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SLPKILQKVFPFFWLGEFISAGSKVVELHRVKKIGGSLEEDLSDYIKPEMLPTYWLIPLD HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEE FRPTNSSILNLHTLVLARVLTRDVFQHLKYAALNGEWNLNHSDLNTMKQQLFAKYHAAYQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SYKHLSQPSLQEDEFYNLLLCIFKHRYSWKQMSLIKTVPADLWENLCCLTLDHTGRPQDM HHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCEEEEECCCCCCCCH EFASLIGTLYTQGLIHKESEAFLSSLTLLSLDQFKTIRRQSTNIAMFLENLATHNSTFRS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHC LPPITVHPLKRSVFSQPEEDESSLLIG CCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA