| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835788
GI number: 15835788
Start: 287569
End: 288078
Strand: Reverse
Name: Not Available
Synonym: CPj0253
Alternate gene names: NA
Gene position: 288078-287569 (Counterclockwise)
Preceding gene: 15835789
Following gene: 15835787
Centisome position: 23.49
GC content: 39.22
Gene sequence:
>510_bases ATGTCGAGTTCGATACCCACAACACAAAAAATAACAATATCGATTCCTACTTTTGTTCGATTTAACATCGAATCAATCAA CCTTACTGATGAGCAAAAGAAAACAGCACTTACTATTGGTCAGAATATTGCTACAGAGAATACTCAAGTTTTAGGAAATT TTGTTGATGCAGATGGAGGACTGATATGCCAGAACGATCTTTCCGTTGGAGGAAATATCAATATCACTCCACAAACCTTC AATACTATGGTTTTCAACGGTCGGGTGAATCTATCGAATTCTCCTTTTTCTTATCAAGACTCCTTGGGGAATAAGCGTCA AGACTATGCAAATATTAATACTGAGCAACCTCAACAGTATGTGCCTTATGGATACTACAAACTTACCAGAGTCATGATGA TGCAGCGAGCTGCTCTTTCAGGAGGGCATGTAGGTTCGGGAGATATTGGTTGGGGGGAGTCAATGTACCTTGGAATAAGT TCAATCAAACGTCAACACAAAGTACAGTGA
Upstream 100 bases:
>100_bases CTTGGATTAACTTAGAGAGCACGATATGGATGAACCTTATGTCTCTATCCACATGTGTCATTTGGTTTCCATTTCCATCT AATTTTGTGGAGGTAGATTA
Downstream 100 bases:
>100_bases TCAATTCCGCTATTTATATCGACTCAAGTCAGACTTGGATGATGCGATTTCAAGCAAGTGCTTCTATTCCTAGGCTCTTT CGTATTTCAATTTTTATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSSSIPTTQKITISIPTFVRFNIESINLTDEQKKTALTIGQNIATENTQVLGNFVDADGGLICQNDLSVGGNINITPQTF NTMVFNGRVNLSNSPFSYQDSLGNKRQDYANINTEQPQQYVPYGYYKLTRVMMMQRAALSGGHVGSGDIGWGESMYLGIS SIKRQHKVQ
Sequences:
>Translated_169_residues MSSSIPTTQKITISIPTFVRFNIESINLTDEQKKTALTIGQNIATENTQVLGNFVDADGGLICQNDLSVGGNINITPQTF NTMVFNGRVNLSNSPFSYQDSLGNKRQDYANINTEQPQQYVPYGYYKLTRVMMMQRAALSGGHVGSGDIGWGESMYLGIS SIKRQHKVQ >Mature_168_residues SSSIPTTQKITISIPTFVRFNIESINLTDEQKKTALTIGQNIATENTQVLGNFVDADGGLICQNDLSVGGNINITPQTFN TMVFNGRVNLSNSPFSYQDSLGNKRQDYANINTEQPQQYVPYGYYKLTRVMMMQRAALSGGHVGSGDIGWGESMYLGISS IKRQHKVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18649; Mature: 18518
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSIPTTQKITISIPTFVRFNIESINLTDEQKKTALTIGQNIATENTQVLGNFVDADGG CCCCCCCCEEEEEECCCEEEEEEEEECCCCCHHHEEEEECCCCCCCCCEEEEEEECCCCC LICQNDLSVGGNINITPQTFNTMVFNGRVNLSNSPFSYQDSLGNKRQDYANINTEQPQQY EEEECCCCCCCEEEECCCCCCEEEEECEEECCCCCCCHHHHCCCCCCHHCCCCCCCCCCC VPYGYYKLTRVMMMQRAALSGGHVGSGDIGWGESMYLGISSIKRQHKVQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHCCC >Mature Secondary Structure SSSIPTTQKITISIPTFVRFNIESINLTDEQKKTALTIGQNIATENTQVLGNFVDADGG CCCCCCCEEEEEECCCEEEEEEEEECCCCCHHHEEEEECCCCCCCCCEEEEEEECCCCC LICQNDLSVGGNINITPQTFNTMVFNGRVNLSNSPFSYQDSLGNKRQDYANINTEQPQQY EEEECCCCCCCEEEECCCCCCEEEEECEEECCCCCCCHHHHCCCCCCHHCCCCCCCCCCC VPYGYYKLTRVMMMQRAALSGGHVGSGDIGWGESMYLGISSIKRQHKVQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA