| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835777
GI number: 15835777
Start: 279106
End: 279540
Strand: Reverse
Name: Not Available
Synonym: CPj0242
Alternate gene names: NA
Gene position: 279540-279106 (Counterclockwise)
Preceding gene: 15835778
Following gene: 15835776
Centisome position: 22.79
GC content: 38.62
Gene sequence:
>435_bases ATGGCTTGTTCTATTTTTTTTAGAATGTCTCAAGGAGATTATGATGATGAACCCTTGAGTAAGAAAACGGCTTGTTTAGT TGTAGATACTATGTTGTATCCTGTAATTGCTGTAGTTTGTGCAGTTGTAAGTGTAGTTTTGTTGATTTTAAAGGTTCTAT TTCTACTTCTCTCATTTCCGTTTAAGTTATGTAGTGCATCGAGTGCTTTACCTGGGGAAAGAGTAAGTCTGGGATCACAT TTTAAATGCCTCTATGGTGGTGGCCTTCCTTATCTACTTGCGTGCTTGTTAATCGTCCCAGTCATAGGAACCGCAATTCA CGGATTTATAATTTCACATAGGACTAGTGAGGACGCTAGACTCTCATCCGCAATAGTCTTTATGCAAGCCCCGATTCTTC AATTGGCAGGAATGTCTGGATTAATCAAACCTTAA
Upstream 100 bases:
>100_bases TTAGAGGGGGAAGGGTTAGAATTTTTATTCCAATTAAAACTAAAAATCTTTAAAATATTGTTCTTTATATCAATTTTCTC AGAAACCAACGGTTATTCTT
Downstream 100 bases:
>100_bases GGAAATGAGCTCGCTTCGTTAGAAAGAGAAGTCTTTTTAAATAGACCAAGGAAACTCTTCTTCCTTGCATTAAATAAAAA ATGACTATTTTTAAACAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MACSIFFRMSQGDYDDEPLSKKTACLVVDTMLYPVIAVVCAVVSVVLLILKVLFLLLSFPFKLCSASSALPGERVSLGSH FKCLYGGGLPYLLACLLIVPVIGTAIHGFIISHRTSEDARLSSAIVFMQAPILQLAGMSGLIKP
Sequences:
>Translated_144_residues MACSIFFRMSQGDYDDEPLSKKTACLVVDTMLYPVIAVVCAVVSVVLLILKVLFLLLSFPFKLCSASSALPGERVSLGSH FKCLYGGGLPYLLACLLIVPVIGTAIHGFIISHRTSEDARLSSAIVFMQAPILQLAGMSGLIKP >Mature_143_residues ACSIFFRMSQGDYDDEPLSKKTACLVVDTMLYPVIAVVCAVVSVVLLILKVLFLLLSFPFKLCSASSALPGERVSLGSHF KCLYGGGLPYLLACLLIVPVIGTAIHGFIISHRTSEDARLSSAIVFMQAPILQLAGMSGLIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15422; Mature: 15291
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACSIFFRMSQGDYDDEPLSKKTACLVVDTMLYPVIAVVCAVVSVVLLILKVLFLLLSFP CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKLCSASSALPGERVSLGSHFKCLYGGGLPYLLACLLIVPVIGTAIHGFIISHRTSEDAR HHHHCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LSSAIVFMQAPILQLAGMSGLIKP HHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ACSIFFRMSQGDYDDEPLSKKTACLVVDTMLYPVIAVVCAVVSVVLLILKVLFLLLSFP CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKLCSASSALPGERVSLGSHFKCLYGGGLPYLLACLLIVPVIGTAIHGFIISHRTSEDAR HHHHCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LSSAIVFMQAPILQLAGMSGLIKP HHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA