| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835753
GI number: 15835753
Start: 258201
End: 258680
Strand: Reverse
Name: Not Available
Synonym: CPj0218
Alternate gene names: NA
Gene position: 258680-258201 (Counterclockwise)
Preceding gene: 15835762
Following gene: 15835751
Centisome position: 21.09
GC content: 38.12
Gene sequence:
>480_bases TTGTCTAAAAAAGTGTTTTTCGAATCTTATGAAGATTTTGCAAATGTAGCTTCCTCCTGGCCTAAGTCTTTAAGAGCTTT GGTCCAGGGAAGGTATTTTGTTGATTCAGAACTTAAAGAGACTCCTTATCGTATTCATGACTTTAAGAAGACTCCAATAC ACCATAGGCTATATCGTAGCCTTCCTATCATTTCTACCATTGGTGGAATCATTCGATTGATAGAAGCGCATTCAGGGCCG ATCCATCCTAGAGATAAAATGAAGTACAGATTCGAGGTGCTTCAAGCTGTTATTGAGATTTTAGGTTTAGGGGTTCTGAT TCTTGTCTTTGATATTATAGGGTGCTTCCTTGCTTTCCTTGTCGCAATAATTCTAAGCCTACTTCTCTATTGTAATTCAA CCTTTACTTGTGTGCAGAACCTCTCCTTTACCGAAAGGATGTTAGAGGGTATAGGTGAAGCTGTTAATTTCTTAGCTTAA
Upstream 100 bases:
>100_bases CAATATTTTATTGGGGATATTTTGTTTTAAGAAAATTAATCTTTTTAAAACTTTTATTTTAATGAATAATAATGTATATT TGTTTTGTTTTTTAATTTTT
Downstream 100 bases:
>100_bases GAGGAACGACGATCTAAAACGGCTTTAGTTACTGTTAGAGTCGGTATAGCTAGTGTAATTACAATGCCTTTGACTAGCAT TGCAAAGATCATAACGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKKTPIHHRLYRSLPIISTIGGIIRLIEAHSGP IHPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLYCNSTFTCVQNLSFTERMLEGIGEAVNFLA
Sequences:
>Translated_159_residues MSKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKKTPIHHRLYRSLPIISTIGGIIRLIEAHSGP IHPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLYCNSTFTCVQNLSFTERMLEGIGEAVNFLA >Mature_158_residues SKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKKTPIHHRLYRSLPIISTIGGIIRLIEAHSGPI HPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFLVAIILSLLLYCNSTFTCVQNLSFTERMLEGIGEAVNFLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18142; Mature: 18010
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKKTPIHHRLYRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHH LPIISTIGGIIRLIEAHSGPIHPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFL CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAIILSLLLYCNSTFTCVQNLSFTERMLEGIGEAVNFLA HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKKVFFESYEDFANVASSWPKSLRALVQGRYFVDSELKETPYRIHDFKKTPIHHRLYRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHH LPIISTIGGIIRLIEAHSGPIHPRDKMKYRFEVLQAVIEILGLGVLILVFDIIGCFLAFL CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAIILSLLLYCNSTFTCVQNLSFTERMLEGIGEAVNFLA HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA