Click here to switch to the map view.

The map label for this gene is ypdP

Identifier: 15835752

GI number: 15835752

Start: 257518

End: 258204

Strand: Direct

Name: ypdP

Synonym: CPj0217

Alternate gene names: 15835752

Gene position: 257518-258204 (Clockwise)

Preceding gene: 15835744

Following gene: 15835754

Centisome position: 21.0

GC content: 37.85

Gene sequence:

>687_bases
TTGAAAGGATTTTTATCTGTGAATGAATTAATTTTTGGATTCCAGACTTTCTCTGTTGTAGTTTTAGGAGTTTTCTTTGC
CTCTAGAGGAAAGGCTTGGCTTACAGGATGGCTATCGCTGCTCTCAAGCATCATGAATGTCTTTGTTCTAAAACAAATCC
ATCTCTGGGGTTTTGAAGTTACGTCTGCTGATGTCTATGTGATTGGTTTGCTTACTTGTCTAAATTATGCCCGAGAGCAC
TACGAAAAAAACGATATCAATGATGCTATGCTATGCTCCTGGGTCATCTCCATAGCGTTTTTGGTTCTCACCCAGCTACA
CCTATTTTTAATCCCCTCACCTAACGACTCTTCTCAAGAGCATTTCTTAGCTCTTTTTTCTTCTACTCCAAGAATCGTAG
TAGCCTCTCTGGTCACTTTAATTTTCGTTCAGATCGTGGATATAAAACTCTTTACCTTCCTTCAACGAGTTTTTTCAAAG
AAATATTTTGCAATGCGCTCAACAATTTCCCTGCTCTTTTCTCAACTCATTGATACCATAATATTTTCATTTTTAGGATT
GTATGGATTGGTCAGCAATCTTTGTGACGTTATGATCTTTGCAATGCTAGTCAAAGGCATTGTAATTACACTAGCTATAC
CGACTCTAACAGTAACTAAAGCCGTTTTAGATCGTCGTTCCTCTTAA

Upstream 100 bases:

>100_bases
GGAAGGATTTCCAAGCATCATCTACAAATAAAATCCTACATATCTTAAACTAAAACGAAATGTATCTGATCTATGATTTC
ACTAACCAAAATGCTGCAAA

Downstream 100 bases:

>100_bases
GCTAAGAAATTAACAGCTTCACCTATACCCTCTAACATCCTTTCGGTAAAGGAGAGGTTCTGCACACAAGTAAAGGTTGA
ATTACAATAGAGAAGTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKGFLSVNELIFGFQTFSVVVLGVFFASRGKAWLTGWLSLLSSIMNVFVLKQIHLWGFEVTSADVYVIGLLTCLNYAREH
YEKNDINDAMLCSWVISIAFLVLTQLHLFLIPSPNDSSQEHFLALFSSTPRIVVASLVTLIFVQIVDIKLFTFLQRVFSK
KYFAMRSTISLLFSQLIDTIIFSFLGLYGLVSNLCDVMIFAMLVKGIVITLAIPTLTVTKAVLDRRSS

Sequences:

>Translated_228_residues
MKGFLSVNELIFGFQTFSVVVLGVFFASRGKAWLTGWLSLLSSIMNVFVLKQIHLWGFEVTSADVYVIGLLTCLNYAREH
YEKNDINDAMLCSWVISIAFLVLTQLHLFLIPSPNDSSQEHFLALFSSTPRIVVASLVTLIFVQIVDIKLFTFLQRVFSK
KYFAMRSTISLLFSQLIDTIIFSFLGLYGLVSNLCDVMIFAMLVKGIVITLAIPTLTVTKAVLDRRSS
>Mature_228_residues
MKGFLSVNELIFGFQTFSVVVLGVFFASRGKAWLTGWLSLLSSIMNVFVLKQIHLWGFEVTSADVYVIGLLTCLNYAREH
YEKNDINDAMLCSWVISIAFLVLTQLHLFLIPSPNDSSQEHFLALFSSTPRIVVASLVTLIFVQIVDIKLFTFLQRVFSK
KYFAMRSTISLLFSQLIDTIIFSFLGLYGLVSNLCDVMIFAMLVKGIVITLAIPTLTVTKAVLDRRSS

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 25657; Mature: 25657

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFLSVNELIFGFQTFSVVVLGVFFASRGKAWLTGWLSLLSSIMNVFVLKQIHLWGFEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
TSADVYVIGLLTCLNYAREHYEKNDINDAMLCSWVISIAFLVLTQLHLFLIPSPNDSSQE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHH
HFLALFSSTPRIVVASLVTLIFVQIVDIKLFTFLQRVFSKKYFAMRSTISLLFSQLIDTI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSFLGLYGLVSNLCDVMIFAMLVKGIVITLAIPTLTVTKAVLDRRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKGFLSVNELIFGFQTFSVVVLGVFFASRGKAWLTGWLSLLSSIMNVFVLKQIHLWGFEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
TSADVYVIGLLTCLNYAREHYEKNDINDAMLCSWVISIAFLVLTQLHLFLIPSPNDSSQE
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHH
HFLALFSSTPRIVVASLVTLIFVQIVDIKLFTFLQRVFSKKYFAMRSTISLLFSQLIDTI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSFLGLYGLVSNLCDVMIFAMLVKGIVITLAIPTLTVTKAVLDRRSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]