Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835750

GI number: 15835750

Start: 255378

End: 256637

Strand: Reverse

Name: Not Available

Synonym: CPj0215

Alternate gene names: NA

Gene position: 256637-255378 (Counterclockwise)

Preceding gene: 15835751

Following gene: 15835749

Centisome position: 20.92

GC content: 39.29

Gene sequence:

>1260_bases
ATGTCTAGCGCTATTGCCCGTGATTGTTTCCCGTCTCCGTCCCCCCAACCCTCTTCAACTTTAGGAGTTCATCCACCTAA
ATATAAGTCTCTGATCCTTTCTGTATCTTTGATTGTCTTGGGTGTTCTCCTGTTATGTGTGGGGATGCTCTTGCTTGTAA
ATGCTATTTTTAGTTTTTCTGTCTTGACTGTAGGACTCGGGGGCGCAGGTGTTTTCTTAGGAAGTTTACTCTTGATTTTG
GGGCTGATTTTCTTTGTCTCTTATCACCGGAAACTTTCAGAAGCCACGAGATCATTAGAACAAAAAATTACTTTAGAATA
TCACCCGTGGGCAGATCTTAGAAAAGAGCTTAATGAAGTTCAGGAATGGAGCAATTTTCTATTAGATGAGTGGGAGGACT
TTAAAGAGGTTGTCGCTCAACATAAGAGTCAGTTCGCTACATTTGAGGGGGATCTTCTTCTGTTTGGACGTGAAGTCGAA
AAATACGAGACGATTTGGAAGGAACTAGACGGAAGGGATGTAGCGTTACTTACTGAGTTAAAGAATATCTGGGGGCCTCT
TGAATTTTTAAGGAAAAAAGGAGATCGCCTTCAATGTGAAATAGATAAGCTTCGAAAAGAAGTCATGAAAGTAGGGAAAT
CTGGATTGAAGCTTGCTTGTGAGTTGACTAAGTTTAAATCTGCTTTAAAAGACGTAAAGATAGAACAGGAATGTTATCGA
GACAAAAGGAAAGTAGAGAAACTGGAGGTGTTTCCCGAAGGTTATAGGAGGGAACTATTAGAAGTCCTAAAAACAAGGCT
TTCCGTTGAAAAAGAGATTCAACTTTTCGAAGAAGTTGTGAGTGCATTTGAAGAAAAATTAGCATCTTTACACAGAACCG
TCTTTTCTGAAGAAGAGCTGCAAGAAGCACTAGATAAAGCTAAAGCAGAACTTCTTGATATTCAAGTCAGGAAATCGGTA
GTAGAAGATCTGAGTTGTGAACCAACTCTTATTCAGTATCATTTATTGCGCCTTTATGAAGTTCAATGTCGTATTGTTGA
GCAGTTTTTAACTCAAACTTTCTCTTCGGAACAAGAGAAAGTCTTAGAGGAGTATGAGGCCTTAAAAGCACGTATTCGCA
AGACTCTTAGAGTTAAATTGGATCAAGTCAGAGCAAATGTGGCATTTGTTGCATCTACGACGGATTTGTTGAGTGAGAGC
GAATCATTAGATGGTAATGATAGTGTGTTTGAAGATGCTCACGATGATTTCTTGGATTAA

Upstream 100 bases:

>100_bases
TTTATTAAAATGTTTGTATTACTGGTTTGTTGACAAAAAGAAACTTCATTCATATAAGTGTATGGAAATTAAGTAGTTAA
CTTCAAGTAAAAAGCAAGTT

Downstream 100 bases:

>100_bases
AGGAAGACTATGAGCGTCCCACCTATTGTAACATACCTCCTGCTCCACATCCTCAACGTGTAGATTCTAAAGGATGTATT
GCTTCGCACGTTTCTACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFSVLTVGLGGAGVFLGSLLLIL
GLIFFVSYHRKLSEATRSLEQKITLEYHPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVE
KYETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEELQEALDKAKAELLDIQVRKSV
VEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSES
ESLDGNDSVFEDAHDDFLD

Sequences:

>Translated_419_residues
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFSVLTVGLGGAGVFLGSLLLIL
GLIFFVSYHRKLSEATRSLEQKITLEYHPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVE
KYETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEELQEALDKAKAELLDIQVRKSV
VEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSES
ESLDGNDSVFEDAHDDFLD
>Mature_418_residues
SSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFSVLTVGLGGAGVFLGSLLLILG
LIFFVSYHRKLSEATRSLEQKITLEYHPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVEK
YETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYRD
KRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEELQEALDKAKAELLDIQVRKSVV
EDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSESE
SLDGNDSVFEDAHDDFLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48046; Mature: 47915

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFS
CCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTVGLGGAGVFLGSLLLILGLIFFVSYHRKLSEATRSLEQKITLEYHPWADLRKELNEV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVEKYETIWKELDGRDVALLTEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHH
KNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QEALDKAKAELLDIQVRKSVVEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSESESLDGNDSVFEDAHDDFLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHCCCHHCCC
>Mature Secondary Structure 
SSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGMLLLVNAIFSFS
CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTVGLGGAGVFLGSLLLILGLIFFVSYHRKLSEATRSLEQKITLEYHPWADLRKELNEV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QEWSNFLLDEWEDFKEVVAQHKSQFATFEGDLLLFGREVEKYETIWKELDGRDVALLTEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHH
KNIWGPLEFLRKKGDRLQCEIDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYR
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
DKRKVEKLEVFPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QEALDKAKAELLDIQVRKSVVEDLSCEPTLIQYHLLRLYEVQCRIVEQFLTQTFSSEQEK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSESESLDGNDSVFEDAHDDFLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCCCCHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA