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The map label for this gene is rpe

Identifier: 15835720

GI number: 15835720

Start: 221385

End: 222074

Strand: Reverse

Name: rpe

Synonym: CPj0185

Alternate gene names: 15835720

Gene position: 222074-221385 (Counterclockwise)

Preceding gene: 15835726

Following gene: 15835719

Centisome position: 18.11

GC content: 38.26

Gene sequence:

>690_bases
GTGAAGAAACAGGAATCCGTATTAGTTGGCCCTTCGATTATGGGGGCAGATCTTACCTGTTTGGGTGTAGAAGCAAAAAA
ACTAGAGCAGGCGGGAAGTGATTTTATACACATAGATATCATGGATGGCCACTTTGTTCCGAACCTTACTTTTGGTCCAG
GGATCATTGCTGCCATTAATAGATCTACGGATCTATTTTTAGAAGTCCACGCTATGATTTACAATCCTTTTGAATTTATA
GAAAGTTTCGTTCGTTCTGGTGCGGATAGAATTATAGTACACTTTGAAGCTTCAGAGGATATAAAAGAGCTTCTATCTTA
TATAAAAAAATGTGGGGTTCAAGCGGGTCTAGCTTTTTCTCCCGATACTTCAATCGAATTTCTTCCTTCTTTCCTTCCGT
TTTGTGATGTCGTTGTGCTAATGTCAGTTTATCAGGGATTTACAGTACAGAGCTTTTTACCACATACAATAGAAAAGATT
GCTTTTGCACGTCATGCGATAAAGACTTTAGGTTTAAAGGATTCTTGTTTAATAGAAGTAGATGGAGGCATAGATCAGCA
ATCTGCGCCGTTATGTCGAGATGCAGGAGCAGATATTTTAGTCACAGCTTCTTACTTATTCGAAGCAGATTCATTAGCAA
TGGAAGATAAAATTTTGTTGCTGCGAGGAGAAAATTATGGTGTTAAGTAG

Upstream 100 bases:

>100_bases
AGTAGGAGTTCATGAATACATCAACCAGTAAATATAAATAGTAGAAAGTTAAAGCTCACTCTACTTTAAATTTAGCGTAG
TGAAGTTGAGATAGGCTGAG

Downstream 100 bases:

>100_bases
CCAATTATCCGTAGGGATGTTTATTTCTACAAAGGACGGTCTTTATAAAGTAACCTCAGTGTCTAAGGTGGCAGGGCCCA
AAGGCGAATCCTTCATTAAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKKQESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDLFLEVHAMIYNPFEFI
ESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFCDVVVLMSVYQGFTVQSFLPHTIEKI
AFARHAIKTLGLKDSCLIEVDGGIDQQSAPLCRDAGADILVTASYLFEADSLAMEDKILLLRGENYGVK

Sequences:

>Translated_229_residues
MKKQESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDLFLEVHAMIYNPFEFI
ESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFCDVVVLMSVYQGFTVQSFLPHTIEKI
AFARHAIKTLGLKDSCLIEVDGGIDQQSAPLCRDAGADILVTASYLFEADSLAMEDKILLLRGENYGVK
>Mature_229_residues
MKKQESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDLFLEVHAMIYNPFEFI
ESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFCDVVVLMSVYQGFTVQSFLPHTIEKI
AFARHAIKTLGLKDSCLIEVDGGIDQQSAPLCRDAGADILVTASYLFEADSLAMEDKILLLRGENYGVK

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=204, Percent_Identity=33.3333333333333, Blast_Score=145, Evalue=2e-35,
Organism=Homo sapiens, GI219879828, Length=204, Percent_Identity=31.8627450980392, Blast_Score=137, Evalue=7e-33,
Organism=Homo sapiens, GI24307923, Length=160, Percent_Identity=26.875, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1789788, Length=202, Percent_Identity=38.1188118811881, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1790523, Length=197, Percent_Identity=31.4720812182741, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1790754, Length=178, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17552948, Length=213, Percent_Identity=36.150234741784, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6322341, Length=215, Percent_Identity=33.953488372093, Blast_Score=145, Evalue=7e-36,
Organism=Drosophila melanogaster, GI24586301, Length=202, Percent_Identity=36.1386138613861, Blast_Score=146, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 25083; Mature: 25083

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAIN
CCCCCCEEECCCCCCCCEEEECCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEC
RSTDLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFS
CCCHHHEEHHHHHCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEC
PDTSIEFLPSFLPFCDVVVLMSVYQGFTVQSFLPHTIEKIAFARHAIKTLGLKDSCLIEV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
DGGIDQQSAPLCRDAGADILVTASYLFEADSLAMEDKILLLRGENYGVK
CCCCCCCCCCCHHHCCCCEEEEHHHHHCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKKQESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAIN
CCCCCCEEECCCCCCCCEEEECCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEC
RSTDLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFS
CCCHHHEEHHHHHCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEC
PDTSIEFLPSFLPFCDVVVLMSVYQGFTVQSFLPHTIEKIAFARHAIKTLGLKDSCLIEV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
DGGIDQQSAPLCRDAGADILVTASYLFEADSLAMEDKILLLRGENYGVK
CCCCCCCCCCCHHHCCCCEEEEHHHHHCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]