| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835712
GI number: 15835712
Start: 216228
End: 217082
Strand: Reverse
Name: Not Available
Synonym: CPj0177
Alternate gene names: NA
Gene position: 217082-216228 (Counterclockwise)
Preceding gene: 15835713
Following gene: 15835708
Centisome position: 17.7
GC content: 40.47
Gene sequence:
>855_bases ATGAAACAGCCCATGTCTCTTATCTTTTCAAGTGTATGTTTAGGATTAGGTCTTGGATCTCTTTCCTCCTGTAATCAAAA GCCCTCTTGGAATTATCACAACACTTCAACGAGCGAAGAATTCTTTGTTCATGGAAATAAGAGTGTTTCGCAACTGCCTC ATTATCCTTCTGCATTTCGTACGACTCAAATCTTTTCTGAAGAGCACAATGATCCTTATGTCGTAGCTAAGACTGATGAA GAGTCTCGTAAAATTTGGAGAGAAATCCATAAAAATCTCAAAATCAAAGGTTCTTACATTCCCATATCGACTTATGGAAG TCTGATGCACCCAAAATCAGCAGCTCTTACATTAAAAACGTATCGTCCACATCCTATTTGGATAAATGGATACGAGCGTT CTTTTAATATAGACACAGGAAAGTACTTAAAAAACGGAAGTCGCCGTAGAACTTCTCACGATGGTCCGAAAAATCGAGCT GTACTGAATCTCATTAAATCTTCGGGACGACGCTGTAATGCTATAGGCCTTGAGATGACAGAAGAAGACTTTGTAATAGC TAGAAGGCGAGAAGGTGTTTATAGCCTGTATCCCGTTGAAGTGTGCTCGTATCCTCAGGGGAATCCTTTTGTCATTGCTT ATGCCTGGATTGCAGATGAGAGTGCTTGCTCAAAAGAGGTCCTACCTGTAAAAGGGTACTATTCTTTAGTCTGGGAAAGC GTTTCTTCCTCTGATTCTCTGAATGCTTTTGGAGATTCCTTTGCAGAGGACTACCTCAGAAGCACGTTTTTAGCAAACGG AACTTCTATACTCTGTGTTCATGAAAGCTATAAGAAAGTTCCTCCTCAGCCCTAA
Upstream 100 bases:
>100_bases AGCAAAATTTCAGACCGAAACGTTGTTGAAAAGCTCCTTTAAGTAGGACAAAAGAGAGCAAACGAAATCAAAATTCATTT TCTTAATCTCCGAGGAATCC
Downstream 100 bases:
>100_bases GAAAAGAAGTTTACTTAGAGATGAGTTCTCTAGAAAGCAAATAAGACATCCCCTTAAAACTTAAGGGGATGTCTTAACTC TATTTATACAGTAATTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFRTTQIFSEEHNDPYVVAKTDE ESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKTYRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRA VLNLIKSSGRRCNAIGLEMTEEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP
Sequences:
>Translated_284_residues MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFRTTQIFSEEHNDPYVVAKTDE ESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKTYRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRA VLNLIKSSGRRCNAIGLEMTEEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP >Mature_284_residues MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFRTTQIFSEEHNDPYVVAKTDE ESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKTYRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRA VLNLIKSSGRRCNAIGLEMTEEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32071; Mature: 32071
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFR CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCHHH TTQIFSEEHNDPYVVAKTDEESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKT HHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEECEEEEHHHCCCCCCCCCCEEEEEE YRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRAVLNLIKSSGRRCNAIGLEMT CCCCCEEEECCCEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEC EEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES CCCEEEEECCCCCEEEECCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP HCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHCCCCCCC >Mature Secondary Structure MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFR CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCHHH TTQIFSEEHNDPYVVAKTDEESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKT HHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEECEEEEHHHCCCCCCCCCCEEEEEE YRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRAVLNLIKSSGRRCNAIGLEMT CCCCCEEEECCCEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEC EEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES CCCEEEEECCCCCEEEECCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP HCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA