Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835712

GI number: 15835712

Start: 216228

End: 217082

Strand: Reverse

Name: Not Available

Synonym: CPj0177

Alternate gene names: NA

Gene position: 217082-216228 (Counterclockwise)

Preceding gene: 15835713

Following gene: 15835708

Centisome position: 17.7

GC content: 40.47

Gene sequence:

>855_bases
ATGAAACAGCCCATGTCTCTTATCTTTTCAAGTGTATGTTTAGGATTAGGTCTTGGATCTCTTTCCTCCTGTAATCAAAA
GCCCTCTTGGAATTATCACAACACTTCAACGAGCGAAGAATTCTTTGTTCATGGAAATAAGAGTGTTTCGCAACTGCCTC
ATTATCCTTCTGCATTTCGTACGACTCAAATCTTTTCTGAAGAGCACAATGATCCTTATGTCGTAGCTAAGACTGATGAA
GAGTCTCGTAAAATTTGGAGAGAAATCCATAAAAATCTCAAAATCAAAGGTTCTTACATTCCCATATCGACTTATGGAAG
TCTGATGCACCCAAAATCAGCAGCTCTTACATTAAAAACGTATCGTCCACATCCTATTTGGATAAATGGATACGAGCGTT
CTTTTAATATAGACACAGGAAAGTACTTAAAAAACGGAAGTCGCCGTAGAACTTCTCACGATGGTCCGAAAAATCGAGCT
GTACTGAATCTCATTAAATCTTCGGGACGACGCTGTAATGCTATAGGCCTTGAGATGACAGAAGAAGACTTTGTAATAGC
TAGAAGGCGAGAAGGTGTTTATAGCCTGTATCCCGTTGAAGTGTGCTCGTATCCTCAGGGGAATCCTTTTGTCATTGCTT
ATGCCTGGATTGCAGATGAGAGTGCTTGCTCAAAAGAGGTCCTACCTGTAAAAGGGTACTATTCTTTAGTCTGGGAAAGC
GTTTCTTCCTCTGATTCTCTGAATGCTTTTGGAGATTCCTTTGCAGAGGACTACCTCAGAAGCACGTTTTTAGCAAACGG
AACTTCTATACTCTGTGTTCATGAAAGCTATAAGAAAGTTCCTCCTCAGCCCTAA

Upstream 100 bases:

>100_bases
AGCAAAATTTCAGACCGAAACGTTGTTGAAAAGCTCCTTTAAGTAGGACAAAAGAGAGCAAACGAAATCAAAATTCATTT
TCTTAATCTCCGAGGAATCC

Downstream 100 bases:

>100_bases
GAAAAGAAGTTTACTTAGAGATGAGTTCTCTAGAAAGCAAATAAGACATCCCCTTAAAACTTAAGGGGATGTCTTAACTC
TATTTATACAGTAATTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFRTTQIFSEEHNDPYVVAKTDE
ESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKTYRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRA
VLNLIKSSGRRCNAIGLEMTEEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES
VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP

Sequences:

>Translated_284_residues
MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFRTTQIFSEEHNDPYVVAKTDE
ESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKTYRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRA
VLNLIKSSGRRCNAIGLEMTEEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES
VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP
>Mature_284_residues
MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFRTTQIFSEEHNDPYVVAKTDE
ESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKTYRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRA
VLNLIKSSGRRCNAIGLEMTEEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES
VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32071; Mature: 32071

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFR
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCHHH
TTQIFSEEHNDPYVVAKTDEESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKT
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEECEEEEHHHCCCCCCCCCCEEEEEE
YRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRAVLNLIKSSGRRCNAIGLEMT
CCCCCEEEECCCEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEC
EEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES
CCCEEEEECCCCCEEEECCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP
HCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHCCCCCCC
>Mature Secondary Structure
MKQPMSLIFSSVCLGLGLGSLSSCNQKPSWNYHNTSTSEEFFVHGNKSVSQLPHYPSAFR
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCHHH
TTQIFSEEHNDPYVVAKTDEESRKIWREIHKNLKIKGSYIPISTYGSLMHPKSAALTLKT
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEECEEEEHHHCCCCCCCCCCEEEEEE
YRPHPIWINGYERSFNIDTGKYLKNGSRRRTSHDGPKNRAVLNLIKSSGRRCNAIGLEMT
CCCCCEEEECCCEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCEEC
EEDFVIARRREGVYSLYPVEVCSYPQGNPFVIAYAWIADESACSKEVLPVKGYYSLVWES
CCCEEEEECCCCCEEEECCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
VSSSDSLNAFGDSFAEDYLRSTFLANGTSILCVHESYKKVPPQP
HCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA