| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835697
GI number: 15835697
Start: 204423
End: 205451
Strand: Reverse
Name: Not Available
Synonym: CPj0162
Alternate gene names: NA
Gene position: 205451-204423 (Counterclockwise)
Preceding gene: 15835702
Following gene: 15835696
Centisome position: 16.75
GC content: 37.03
Gene sequence:
>1029_bases ATGAAACTTTATAGCATCTCTTCAGATGTAGATACACCTTGGATATTTCAGCTTATGTCAAAGGTAGATTCTTATCTTTT CTTAGGCGGGAATAGAATCAAGGTTGTATCTATAGTTATGCAAGAACCTAACTTAATTATTGGAAAAGTAGAAAACGTTC GGATCTCCACAATAGTGAAAATATTAAAGATTTTATCCTTCTTAATCTTCCCTCTGATTTTAATCGCTTTAGCCCTACAC TATTTTCTACATGCTAAATATGCTAATCACTTACTTGTATCTAAGATTTTAGAAAGAGCTCCTCAGTATGTGCCTATTCC TGGTCGTTCAGGAGACACGGCGTCTCATTATAAATTAACAACATTGGTTCCAGTATCCCAAAAAAATCTACAAGCTATGG GATCAAATCCTCTAGAAGTTGAAGCGGCTCTTCGAACTACAAAACCCTCTTTTTTCTGTGTACCTGCAAAATACCGTCAG ATTATAATTTCAAGTCACGGCATTCGCTTTTCTTTAGATCTTGAACAACTTGCTGATGACATTAATTTAGATTCGGTTTC CTGGCCTACGGAGTATCTTAACTCTACTATGGATTTTTGCAGCAAGGCAGATAAACGTGTTATACAGAATGTACAAAATC TGCGGACAGGAACTTACATAAATTCTGTAGGAAAGCGTAGCCTTTTAAAATTCATGTTACAGCACCTATTTATTGATGGG ATCACACAAGAAAACCCTGAAGCCCTTCCTAACAATACATCTGGAAGACTGACTCTATTCCCTAGTGTTCGTTATATCTA TTCTCATTTTACTCCACAAAATCCTACAATATGGCCGCAAGTCTTTTTCAGACAAGGTCCTCTAGATGAAGATCGAGGAG GAGGATTTGAGATCTTAGAGCAATTACAAGAGTTAGGAGTTAGGTTTCCAATTTGCCCCTCTCAAGGACCAGACAATCCT AATTTTCAAGGTTTTCAAGGGATTCGTATCTATTGGGAAGATTCCTATCAACCCAATAAGGAGGTTTAA
Upstream 100 bases:
>100_bases TCCGTGCAAAGAGGTGTCGCTGGTGTAGGGGTATGAATGATCGATATACATTTTATAATTTGTTTACACTTTATACAATA TACAATCGCCTTTTCGAATT
Downstream 100 bases:
>100_bases ATCATTCCTGTAAACTATTCATCCAGGGATTGTTCTGATACTATTTTACACGATTTTTGATGGCTGTTTTTGAGAACTTT AGTTAGAGGCATTCCATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKLYSISSDVDTPWIFQLMSKVDSYLFLGGNRIKVVSIVMQEPNLIIGKVENVRISTIVKILKILSFLIFPLILIALALH YFLHAKYANHLLVSKILERAPQYVPIPGRSGDTASHYKLTTLVPVSQKNLQAMGSNPLEVEAALRTTKPSFFCVPAKYRQ IIISSHGIRFSLDLEQLADDINLDSVSWPTEYLNSTMDFCSKADKRVIQNVQNLRTGTYINSVGKRSLLKFMLQHLFIDG ITQENPEALPNNTSGRLTLFPSVRYIYSHFTPQNPTIWPQVFFRQGPLDEDRGGGFEILEQLQELGVRFPICPSQGPDNP NFQGFQGIRIYWEDSYQPNKEV
Sequences:
>Translated_342_residues MKLYSISSDVDTPWIFQLMSKVDSYLFLGGNRIKVVSIVMQEPNLIIGKVENVRISTIVKILKILSFLIFPLILIALALH YFLHAKYANHLLVSKILERAPQYVPIPGRSGDTASHYKLTTLVPVSQKNLQAMGSNPLEVEAALRTTKPSFFCVPAKYRQ IIISSHGIRFSLDLEQLADDINLDSVSWPTEYLNSTMDFCSKADKRVIQNVQNLRTGTYINSVGKRSLLKFMLQHLFIDG ITQENPEALPNNTSGRLTLFPSVRYIYSHFTPQNPTIWPQVFFRQGPLDEDRGGGFEILEQLQELGVRFPICPSQGPDNP NFQGFQGIRIYWEDSYQPNKEV >Mature_342_residues MKLYSISSDVDTPWIFQLMSKVDSYLFLGGNRIKVVSIVMQEPNLIIGKVENVRISTIVKILKILSFLIFPLILIALALH YFLHAKYANHLLVSKILERAPQYVPIPGRSGDTASHYKLTTLVPVSQKNLQAMGSNPLEVEAALRTTKPSFFCVPAKYRQ IIISSHGIRFSLDLEQLADDINLDSVSWPTEYLNSTMDFCSKADKRVIQNVQNLRTGTYINSVGKRSLLKFMLQHLFIDG ITQENPEALPNNTSGRLTLFPSVRYIYSHFTPQNPTIWPQVFFRQGPLDEDRGGGFEILEQLQELGVRFPICPSQGPDNP NFQGFQGIRIYWEDSYQPNKEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38868; Mature: 38868
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYSISSDVDTPWIFQLMSKVDSYLFLGGNRIKVVSIVMQEPNLIIGKVENVRISTIVK CEEEECCCCCCCHHHHHHHHHHHHEEEECCCEEEEEEEEECCCCEEEECCCCCHHHHHHH ILKILSFLIFPLILIALALHYFLHAKYANHLLVSKILERAPQYVPIPGRSGDTASHYKLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEE TLVPVSQKNLQAMGSNPLEVEAALRTTKPSFFCVPAKYRQIIISSHGIRFSLDLEQLADD EEECCCHHHHHHHCCCCCEEHHHHHCCCCCEEEECHHHHEEEEECCCEEEEEEHHHHHHH INLDSVSWPTEYLNSTMDFCSKADKRVIQNVQNLRTGTYINSVGKRSLLKFMLQHLFIDG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC ITQENPEALPNNTSGRLTLFPSVRYIYSHFTPQNPTIWPQVFFRQGPLDEDRGGGFEILE CCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHH QLQELGVRFPICPSQGPDNPNFQGFQGIRIYWEDSYQPNKEV HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MKLYSISSDVDTPWIFQLMSKVDSYLFLGGNRIKVVSIVMQEPNLIIGKVENVRISTIVK CEEEECCCCCCCHHHHHHHHHHHHEEEECCCEEEEEEEEECCCCEEEECCCCCHHHHHHH ILKILSFLIFPLILIALALHYFLHAKYANHLLVSKILERAPQYVPIPGRSGDTASHYKLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEE TLVPVSQKNLQAMGSNPLEVEAALRTTKPSFFCVPAKYRQIIISSHGIRFSLDLEQLADD EEECCCHHHHHHHCCCCCEEHHHHHCCCCCEEEECHHHHEEEEECCCEEEEEEHHHHHHH INLDSVSWPTEYLNSTMDFCSKADKRVIQNVQNLRTGTYINSVGKRSLLKFMLQHLFIDG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC ITQENPEALPNNTSGRLTLFPSVRYIYSHFTPQNPTIWPQVFFRQGPLDEDRGGGFEILE CCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHH QLQELGVRFPICPSQGPDNPNFQGFQGIRIYWEDSYQPNKEV HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA